RNA–Protein interactions for RNA: ENST00000468325.5

ASIC3-205, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 1 (best)

Gene ASIC3, Length 1,668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-205ENST00000468325 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
ASIC3-205ENST00000468325 VPS8Q8N3P4 1428 aa32.34■■■□□ 2.77
ASIC3-205ENST00000468325 CHMP7Q8WUX9 453 aaPredicted RBP32.34■■■□□ 2.77
ASIC3-205ENST00000468325 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
ASIC3-205ENST00000468325 EFCAB5A4FU69 1503 aa32.29■■■□□ 2.76
ASIC3-205ENST00000468325 FBLN2P98095 1184 aa32.24■■■□□ 2.75
ASIC3-205ENST00000468325 IQGAP2Q13576 1575 aa32.23■■■□□ 2.75
ASIC3-205ENST00000468325 KIAA0586Q9BVV6 1533 aa32.22■■■□□ 2.75
ASIC3-205ENST00000468325 NUP160Q12769 1436 aa32.15■■■□□ 2.74
ASIC3-205ENST00000468325 SAMD9Q5K651 1589 aa32.13■■■□□ 2.73
ASIC3-205ENST00000468325 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
ASIC3-205ENST00000468325 UGGT2Q9NYU1 1516 aa32.09■■■□□ 2.73
ASIC3-205ENST00000468325 APLP2Q06481 763 aa32.08■■■□□ 2.73
ASIC3-205ENST00000468325 P3H3Q8IVL6 736 aa32.07■■■□□ 2.72
ASIC3-205ENST00000468325 FHOD3Q2V2M9 1422 aa32.06■■■□□ 2.72
ASIC3-205ENST00000468325 FMN1Q68DA7 1419 aa32.02■■■□□ 2.72
ASIC3-205ENST00000468325 CHD1O14646 1710 aa32■■■□□ 2.71
ASIC3-205ENST00000468325 TRIM26Q12899 539 aaPredicted RBP31.99■■■□□ 2.71
ASIC3-205ENST00000468325 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
ASIC3-205ENST00000468325 JPH4Q96JJ6 628 aa31.9■■■□□ 2.7
ASIC3-205ENST00000468325 CASKIN1Q8WXD9 1431 aa31.89■■■□□ 2.7
ASIC3-205ENST00000468325 FYCO1Q9BQS8 1478 aa31.89■■■□□ 2.7
ASIC3-205ENST00000468325 DISP1Q96F81 1524 aa31.89■■■□□ 2.7
ASIC3-205ENST00000468325 KIAA0556O60303 1618 aa31.88■■■□□ 2.69
ASIC3-205ENST00000468325 PCF11O94913 1555 aaKnown RBP31.86■■■□□ 2.69
ASIC3-205ENST00000468325 CARMIL2Q6F5E8 1435 aa31.85■■■□□ 2.69
ASIC3-205ENST00000468325 MAP3K1Q13233 1512 aa31.85■■■□□ 2.69
ASIC3-205ENST00000468325 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
ASIC3-205ENST00000468325 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
ASIC3-205ENST00000468325 TIAM1Q13009 1591 aa31.75■■■□□ 2.67
ASIC3-205ENST00000468325 TTBK1Q5TCY1 1321 aaPredicted RBP31.75■■■□□ 2.67
ASIC3-205ENST00000468325 PRG4Q92954 1404 aaPredicted RBP31.7■■■□□ 2.66
ASIC3-205ENST00000468325 SHROOM2Q13796 1616 aa31.7■■■□□ 2.66
ASIC3-205ENST00000468325 CLASP1Q7Z460 1538 aa31.69■■■□□ 2.66
ASIC3-205ENST00000468325 CFAP43Q8NDM7 1665 aa31.68■■■□□ 2.66
ASIC3-205ENST00000468325 KANK4Q5T7N3 995 aaPredicted RBP31.68■■■□□ 2.66
ASIC3-205ENST00000468325 HECW1Q76N89 1606 aa31.65■■■□□ 2.66
ASIC3-205ENST00000468325 LRRC9Q6ZRR7 1453 aa31.62■■■□□ 2.65
ASIC3-205ENST00000468325 CCDC18Q5T9S5 1454 aa31.62■■■□□ 2.65
ASIC3-205ENST00000468325 RAPGEF6Q8TEU7 1601 aa31.55■■■□□ 2.64
ASIC3-205ENST00000468325 OSCARQ8IYS5 282 aa31.53■■■□□ 2.64
ASIC3-205ENST00000468325 EPRSP07814 1512 aaKnown RBP31.52■■■□□ 2.64
ASIC3-205ENST00000468325 PTPRGP23470 1445 aa31.51■■■□□ 2.64
ASIC3-205ENST00000468325 LRRIQ1Q96JM4 1722 aa31.5■■■□□ 2.63
ASIC3-205ENST00000468325 PLB1Q6P1J6 1458 aa31.48■■■□□ 2.63
ASIC3-205ENST00000468325 MTUS2Q5JR59 1369 aa31.47■■■□□ 2.63
ASIC3-205ENST00000468325 NUP153P49790 1475 aaKnown RBP31.47■■■□□ 2.63
ASIC3-205ENST00000468325 ABCA8O94911 1581 aa31.43■■■□□ 2.62
ASIC3-205ENST00000468325 EHBP1L1Q8N3D4 1523 aa31.41■■■□□ 2.62
ASIC3-205ENST00000468325 ERCC6L2Q5T890 1561 aa31.4■■■□□ 2.62
ASIC3-205ENST00000468325 CDK13Q14004 1512 aaKnown RBP31.39■■■□□ 2.62
ASIC3-205ENST00000468325 CDK11AQ9UQ88 783 aaPredicted RBP31.37■■■□□ 2.61
ASIC3-205ENST00000468325 RRBP1Q9P2E9 1410 aaKnown RBP31.34■■■□□ 2.61
ASIC3-205ENST00000468325 ARID3CA6NKF2 412 aa31.33■■■□□ 2.61
ASIC3-205ENST00000468325 UACAQ9BZF9 1416 aa31.33■■■□□ 2.61
ASIC3-205ENST00000468325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.31■■■□□ 2.6
ASIC3-205ENST00000468325 HNRNPUL2Q1KMD3 747 aaKnown RBP31.31■■■□□ 2.6
ASIC3-205ENST00000468325 MAGI3Q5TCQ9 1506 aa31.3■■■□□ 2.6
ASIC3-205ENST00000468325 PHLDB1Q86UU1 1377 aa31.29■■■□□ 2.6
ASIC3-205ENST00000468325 SUPT6HQ7KZ85 1726 aaKnown RBP31.29■■■□□ 2.6
ASIC3-205ENST00000468325 CCNB3Q8WWL7 1395 aa31.27■■■□□ 2.6
ASIC3-205ENST00000468325 NCOA2Q15596 1464 aa31.25■■■□□ 2.59
ASIC3-205ENST00000468325 ATP10BO94823 1461 aa31.23■■■□□ 2.59
ASIC3-205ENST00000468325 ABCC2Q92887 1545 aa31.22■■■□□ 2.59
ASIC3-205ENST00000468325 ARHGEF11O15085 1522 aa31.2■■■□□ 2.59
ASIC3-205ENST00000468325 TROQ12816 1431 aaPredicted RBP31.19■■■□□ 2.58
ASIC3-205ENST00000468325 UHRF1BP1LA0JNW5 1464 aa31.19■■■□□ 2.58
ASIC3-205ENST00000468325 PLEKHD1A6NEE1 506 aa31.16■■■□□ 2.58
ASIC3-205ENST00000468325 MYOM3Q5VTT5 1437 aa31.15■■■□□ 2.58
ASIC3-205ENST00000468325 FGD6Q6ZV73 1430 aa31.12■■■□□ 2.57
ASIC3-205ENST00000468325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.11■■■□□ 2.57
ASIC3-205ENST00000468325 ADCY10Q96PN6 1610 aa31.06■■■□□ 2.56
ASIC3-205ENST00000468325 FAM50AQ14320 339 aaKnown RBP31.04■■■□□ 2.56
ASIC3-205ENST00000468325 KDM5BQ9UGL1 1544 aa31.04■■■□□ 2.56
ASIC3-205ENST00000468325 MIA2Q96PC5 1412 aa31.02■■■□□ 2.56
ASIC3-205ENST00000468325 KIF14Q15058 1648 aa31■■■□□ 2.55
ASIC3-205ENST00000468325 ZCCHC11Q5TAX3 1644 aaKnown RBP30.96■■■□□ 2.55
ASIC3-205ENST00000468325 PTPN23Q9H3S7 1636 aa30.94■■■□□ 2.54
ASIC3-205ENST00000468325 TCOF1Q13428 1488 aaKnown RBP30.93■■■□□ 2.54
ASIC3-205ENST00000468325 ITGAEP38570 1179 aa30.91■■■□□ 2.54
ASIC3-205ENST00000468325 ITSN2Q9NZM3 1697 aa30.89■■■□□ 2.54
ASIC3-205ENST00000468325 ABCC10Q5T3U5 1492 aa30.89■■■□□ 2.54
ASIC3-205ENST00000468325 GPATCH8Q9UKJ3 1502 aaKnown RBP30.88■■■□□ 2.53
ASIC3-205ENST00000468325 CFDP1Q9UEE9 299 aaPredicted RBP30.84■■■□□ 2.53
ASIC3-205ENST00000468325 NPM1P06748 294 aaKnown RBP eCLIP30.81■■■□□ 2.52
ASIC3-205ENST00000468325 HRCP23327 699 aa30.81■■■□□ 2.52
ASIC3-205ENST00000468325 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.52
ASIC3-205ENST00000468325 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.52
ASIC3-205ENST00000468325 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.52
ASIC3-205ENST00000468325 WDR7Q9Y4E6 1490 aa30.76■■■□□ 2.51
ASIC3-205ENST00000468325 CDC42BPAQ5VT25 1732 aa30.75■■■□□ 2.51
ASIC3-205ENST00000468325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.74■■■□□ 2.51
ASIC3-205ENST00000468325 KCNH8Q96L42 1107 aa30.74■■■□□ 2.51
ASIC3-205ENST00000468325 CCER1Q8TC90 406 aaPredicted RBP30.73■■■□□ 2.51
ASIC3-205ENST00000468325 CAMSAP2Q08AD1 1489 aa30.71■■■□□ 2.51
ASIC3-205ENST00000468325 TTC37Q6PGP7 1564 aa30.69■■■□□ 2.5
ASIC3-205ENST00000468325 ASXL2Q76L83 1435 aa30.69■■■□□ 2.5
ASIC3-205ENST00000468325 SETD5Q9C0A6 1442 aa30.69■■■□□ 2.5
ASIC3-205ENST00000468325 PREX2Q70Z35 1606 aa30.69■■■□□ 2.5
ASIC3-205ENST00000468325 ZNF644Q9H582 1327 aaPredicted RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms