RNA–Protein interactions for RNA: ENST00000468325.5

ASIC3-205, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 1 (best)

Gene ASIC3, Length 1,668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-205ENST00000468325 NISCHQ9Y2I1 1504 aa46.97■■■■■ 5.11
ASIC3-205ENST00000468325 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.16
ASIC3-205ENST00000468325 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
ASIC3-205ENST00000468325 ABCC9O60706 1549 aa38.92■■■■□ 3.82
ASIC3-205ENST00000468325 DCAF1Q9Y4B6 1507 aa38.91■■■■□ 3.82
ASIC3-205ENST00000468325 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
ASIC3-205ENST00000468325 MYO15BQ96JP2 1530 aa38.54■■■■□ 3.76
ASIC3-205ENST00000468325 NACADO15069 1562 aa38.33■■■■□ 3.73
ASIC3-205ENST00000468325 SHROOM4Q9ULL8 1493 aa38.08■■■■□ 3.69
ASIC3-205ENST00000468325 RB1CC1Q8TDY2 1594 aa38.03■■■■□ 3.68
ASIC3-205ENST00000468325 SCRIBQ14160 1630 aa37.66■■■■□ 3.62
ASIC3-205ENST00000468325 UNC13AQ9UPW8 1703 aa37.09■■■■□ 3.53
ASIC3-205ENST00000468325 BICRAQ9NZM4 1560 aa36.79■■■■□ 3.48
ASIC3-205ENST00000468325 PABPN1Q86U42 306 aaKnown RBP eCLIP36.66■■■■□ 3.46
ASIC3-205ENST00000468325 SUPT5HO00267 1087 aaKnown RBP36.6■■■■□ 3.45
ASIC3-205ENST00000468325 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
ASIC3-205ENST00000468325 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
ASIC3-205ENST00000468325 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
ASIC3-205ENST00000468325 MROH2BQ7Z745 1585 aa36.23■■■■□ 3.39
ASIC3-205ENST00000468325 SMARCA4P51532 1647 aa36.13■■■■□ 3.37
ASIC3-205ENST00000468325 WIZO95785 1651 aa35.89■■■■□ 3.34
ASIC3-205ENST00000468325 PEG3Q9GZU2 1588 aa35.74■■■■□ 3.31
ASIC3-205ENST00000468325 EIF4G1Q04637 1599 aaKnown RBP35.73■■■■□ 3.31
ASIC3-205ENST00000468325 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
ASIC3-205ENST00000468325 ATAD2BQ9ULI0 1458 aa35.6■■■■□ 3.29
ASIC3-205ENST00000468325 TOP2AP11388 1531 aaKnown RBP35.6■■■■□ 3.29
ASIC3-205ENST00000468325 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
ASIC3-205ENST00000468325 NCAPD3P42695 1498 aa35.36■■■■□ 3.25
ASIC3-205ENST00000468325 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
ASIC3-205ENST00000468325 CC2D2AQ9P2K1 1620 aa35.23■■■■□ 3.23
ASIC3-205ENST00000468325 CCDC88BA6NC98 1476 aa35.21■■■■□ 3.23
ASIC3-205ENST00000468325 CHIC1Q5VXU3 224 aa34.95■■■■□ 3.19
ASIC3-205ENST00000468325 CFTRP13569 1480 aa34.52■■■■□ 3.12
ASIC3-205ENST00000468325 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
ASIC3-205ENST00000468325 CADPSQ9ULU8 1353 aa34.44■■■■□ 3.1
ASIC3-205ENST00000468325 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
ASIC3-205ENST00000468325 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
ASIC3-205ENST00000468325 PRDM2Q13029 1718 aa34.26■■■■□ 3.08
ASIC3-205ENST00000468325 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
ASIC3-205ENST00000468325 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
ASIC3-205ENST00000468325 NESP48681 1621 aa34.08■■■■□ 3.05
ASIC3-205ENST00000468325 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
ASIC3-205ENST00000468325 FANCD2Q9BXW9 1451 aa34.04■■■■□ 3.04
ASIC3-205ENST00000468325 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
ASIC3-205ENST00000468325 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
ASIC3-205ENST00000468325 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
ASIC3-205ENST00000468325 CUX1P39880 1505 aa33.9■■■■□ 3.02
ASIC3-205ENST00000468325 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
ASIC3-205ENST00000468325 FAM9AQ8IZU1 332 aaPredicted RBP33.76■■■□□ 2.99
ASIC3-205ENST00000468325 EEA1Q15075 1411 aa33.74■■■□□ 2.99
ASIC3-205ENST00000468325 DNMBPQ6XZF7 1577 aa33.7■■■□□ 2.99
ASIC3-205ENST00000468325 SOGA1O94964 1423 aa33.7■■■□□ 2.99
ASIC3-205ENST00000468325 KIF21AQ7Z4S6 1674 aa33.66■■■□□ 2.98
ASIC3-205ENST00000468325 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
ASIC3-205ENST00000468325 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
ASIC3-205ENST00000468325 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
ASIC3-205ENST00000468325 LOC105371045A0A1W2PR82 267 aa33.55■■■□□ 2.96
ASIC3-205ENST00000468325 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
ASIC3-205ENST00000468325 CSRNP3Q8WYN3 585 aa33.51■■■□□ 2.95
ASIC3-205ENST00000468325 MRC2Q9UBG0 1479 aa33.49■■■□□ 2.95
ASIC3-205ENST00000468325 ERCC6Q03468 1493 aa33.46■■■□□ 2.95
ASIC3-205ENST00000468325 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
ASIC3-205ENST00000468325 KIF27Q86VH2 1401 aa33.44■■■□□ 2.94
ASIC3-205ENST00000468325 CUX2O14529 1486 aa33.34■■■□□ 2.93
ASIC3-205ENST00000468325 WDR62O43379 1518 aa33.32■■■□□ 2.92
ASIC3-205ENST00000468325 ABCA10Q8WWZ4 1543 aa33.32■■■□□ 2.92
ASIC3-205ENST00000468325 RAD54L2Q9Y4B4 1467 aa33.3■■■□□ 2.92
ASIC3-205ENST00000468325 KIF21BO75037 1637 aa33.23■■■□□ 2.91
ASIC3-205ENST00000468325 EHMT2Q96KQ7 1210 aa33.23■■■□□ 2.91
ASIC3-205ENST00000468325 GOLGA3Q08378 1498 aa33.21■■■□□ 2.91
ASIC3-205ENST00000468325 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
ASIC3-205ENST00000468325 WDR97A6NE52 1622 aa33.15■■■□□ 2.9
ASIC3-205ENST00000468325 PRXQ9BXM0 1461 aa33.13■■■□□ 2.89
ASIC3-205ENST00000468325 TARBP1Q13395 1621 aaKnown RBP33.12■■■□□ 2.89
ASIC3-205ENST00000468325 IGF1RP08069 1367 aa33.12■■■□□ 2.89
ASIC3-205ENST00000468325 IFT140Q96RY7 1462 aa33.08■■■□□ 2.89
ASIC3-205ENST00000468325 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.89
ASIC3-205ENST00000468325 TNIKQ9UKE5 1360 aa33.07■■■□□ 2.88
ASIC3-205ENST00000468325 UBTFP17480 764 aaKnown RBP33.06■■■□□ 2.88
ASIC3-205ENST00000468325 RAPGEF2Q9Y4G8 1499 aa33.04■■■□□ 2.88
ASIC3-205ENST00000468325 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
ASIC3-205ENST00000468325 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
ASIC3-205ENST00000468325 GAPVD1Q14C86 1478 aa33■■■□□ 2.87
ASIC3-205ENST00000468325 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
ASIC3-205ENST00000468325 CUL7Q14999 1698 aa32.9■■■□□ 2.86
ASIC3-205ENST00000468325 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
ASIC3-205ENST00000468325 AQRO60306 1485 aaKnown RBP eCLIP32.83■■■□□ 2.852e-7■■■■■ 31.5
ASIC3-205ENST00000468325 ZNF608Q9ULD9 1512 aaPredicted RBP32.8■■■□□ 2.84
ASIC3-205ENST00000468325 GRIN2BQ13224 1484 aa32.79■■■□□ 2.84
ASIC3-205ENST00000468325 PBRM1Q86U86 1689 aa32.75■■■□□ 2.83
ASIC3-205ENST00000468325 EIF4G3O43432 1585 aaKnown RBP32.71■■■□□ 2.83
ASIC3-205ENST00000468325 FHAD1B1AJZ9 1412 aa32.66■■■□□ 2.82
ASIC3-205ENST00000468325 CLIP1P30622 1438 aa32.66■■■□□ 2.82
ASIC3-205ENST00000468325 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
ASIC3-205ENST00000468325 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
ASIC3-205ENST00000468325 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
ASIC3-205ENST00000468325 RANGAP1P46060 587 aaPredicted RBP32.47■■■□□ 2.79
ASIC3-205ENST00000468325 CTTNBP2Q8WZ74 1663 aa32.44■■■□□ 2.78
ASIC3-205ENST00000468325 SYNJ2O15056 1496 aa32.41■■■□□ 2.78
ASIC3-205ENST00000468325 GRIN2AQ12879 1464 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 1268.6 ms