RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
ABCF3-206ENST00000466742 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
ABCF3-206ENST00000466742 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
ABCF3-206ENST00000466742 CLSPNQ9HAW4 1339 aa22.95■■□□□ 1.26
ABCF3-206ENST00000466742 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
ABCF3-206ENST00000466742 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
ABCF3-206ENST00000466742 YTHDC1Q96MU7 727 aaKnown RBP22.93■■□□□ 1.26
ABCF3-206ENST00000466742 CUL7Q14999 1698 aa22.93■■□□□ 1.26
ABCF3-206ENST00000466742 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
ABCF3-206ENST00000466742 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.25
ABCF3-206ENST00000466742 TSHZ2Q9NRE2 1034 aa22.88■■□□□ 1.25
ABCF3-206ENST00000466742 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.246e-6■■■■□ 25.1
ABCF3-206ENST00000466742 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
ABCF3-206ENST00000466742 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
ABCF3-206ENST00000466742 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
ABCF3-206ENST00000466742 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
ABCF3-206ENST00000466742 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
ABCF3-206ENST00000466742 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
ABCF3-206ENST00000466742 MIER1Q8N108 512 aa22.75■■□□□ 1.23
ABCF3-206ENST00000466742 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
ABCF3-206ENST00000466742 ARHGAP35Q9NRY4 1499 aa22.74■■□□□ 1.23
ABCF3-206ENST00000466742 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
ABCF3-206ENST00000466742 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
ABCF3-206ENST00000466742 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
ABCF3-206ENST00000466742 APLP2Q06481 763 aa22.67■■□□□ 1.22
ABCF3-206ENST00000466742 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
ABCF3-206ENST00000466742 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
ABCF3-206ENST00000466742 EFCAB5A4FU69 1503 aa22.6■■□□□ 1.21
ABCF3-206ENST00000466742 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
ABCF3-206ENST00000466742 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
ABCF3-206ENST00000466742 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
ABCF3-206ENST00000466742 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
ABCF3-206ENST00000466742 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
ABCF3-206ENST00000466742 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
ABCF3-206ENST00000466742 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
ABCF3-206ENST00000466742 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
ABCF3-206ENST00000466742 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
ABCF3-206ENST00000466742 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
ABCF3-206ENST00000466742 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
ABCF3-206ENST00000466742 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
ABCF3-206ENST00000466742 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
ABCF3-206ENST00000466742 FYCO1Q9BQS8 1478 aa22.37■■□□□ 1.17
ABCF3-206ENST00000466742 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
ABCF3-206ENST00000466742 NUP160Q12769 1436 aa22.36■■□□□ 1.17
ABCF3-206ENST00000466742 PCF11O94913 1555 aaKnown RBP22.36■■□□□ 1.17
ABCF3-206ENST00000466742 FBLN2P98095 1184 aa22.34■■□□□ 1.17
ABCF3-206ENST00000466742 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
ABCF3-206ENST00000466742 CEP170Q5SW79 1584 aa22.33■■□□□ 1.16
ABCF3-206ENST00000466742 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
ABCF3-206ENST00000466742 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
ABCF3-206ENST00000466742 LRRC9Q6ZRR7 1453 aa22.26■■□□□ 1.15
ABCF3-206ENST00000466742 CFAP43Q8NDM7 1665 aa22.24■■□□□ 1.15
ABCF3-206ENST00000466742 KIAA0556O60303 1618 aa22.23■■□□□ 1.15
ABCF3-206ENST00000466742 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
ABCF3-206ENST00000466742 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
ABCF3-206ENST00000466742 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
ABCF3-206ENST00000466742 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
ABCF3-206ENST00000466742 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
ABCF3-206ENST00000466742 CCDC18Q5T9S5 1454 aa22.13■■□□□ 1.13
ABCF3-206ENST00000466742 MSH5O43196 834 aa22.12■■□□□ 1.13
ABCF3-206ENST00000466742 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
ABCF3-206ENST00000466742 CHD1O14646 1710 aa22.11■■□□□ 1.13
ABCF3-206ENST00000466742 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.13
ABCF3-206ENST00000466742 ANO8Q9HCE9 1232 aaPredicted RBP22.08■■□□□ 1.12
ABCF3-206ENST00000466742 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
ABCF3-206ENST00000466742 LRRIQ1Q96JM4 1722 aa22.07■■□□□ 1.12
ABCF3-206ENST00000466742 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
ABCF3-206ENST00000466742 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
ABCF3-206ENST00000466742 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
ABCF3-206ENST00000466742 EHBP1L1Q8N3D4 1523 aa22.02■■□□□ 1.12
ABCF3-206ENST00000466742 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.11
ABCF3-206ENST00000466742 FANCIQ9NVI1 1328 aa22.01■■□□□ 1.11
ABCF3-206ENST00000466742 NUP153P49790 1475 aaKnown RBP22.01■■□□□ 1.11
ABCF3-206ENST00000466742 RAPGEF6Q8TEU7 1601 aa22.01■■□□□ 1.11
ABCF3-206ENST00000466742 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
ABCF3-206ENST00000466742 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
ABCF3-206ENST00000466742 BCANQ96GW7 911 aa21.97■■□□□ 1.11
ABCF3-206ENST00000466742 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
ABCF3-206ENST00000466742 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
ABCF3-206ENST00000466742 NCOA2Q15596 1464 aa21.95■■□□□ 1.1
ABCF3-206ENST00000466742 FKBP8Q14318 412 aa21.95■■□□□ 1.1
ABCF3-206ENST00000466742 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
ABCF3-206ENST00000466742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
ABCF3-206ENST00000466742 DEKP35659 375 aaKnown RBP21.94■■□□□ 1.1
ABCF3-206ENST00000466742 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
ABCF3-206ENST00000466742 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
ABCF3-206ENST00000466742 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
ABCF3-206ENST00000466742 ABCA8O94911 1581 aa21.92■■□□□ 1.1
ABCF3-206ENST00000466742 PTPRGP23470 1445 aa21.91■■□□□ 1.1
ABCF3-206ENST00000466742 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
ABCF3-206ENST00000466742 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
ABCF3-206ENST00000466742 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.09
ABCF3-206ENST00000466742 ARID3CA6NKF2 412 aa21.89■■□□□ 1.09
ABCF3-206ENST00000466742 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
ABCF3-206ENST00000466742 UBE2Q2Q8WVN8 375 aa21.85■■□□□ 1.09
ABCF3-206ENST00000466742 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
ABCF3-206ENST00000466742 ERCC6L2Q5T890 1561 aa21.8■■□□□ 1.08
ABCF3-206ENST00000466742 ATP10BO94823 1461 aa21.8■■□□□ 1.08
ABCF3-206ENST00000466742 UACAQ9BZF9 1416 aa21.8■■□□□ 1.08
ABCF3-206ENST00000466742 ITGAEP38570 1179 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms