RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 ADAMTS12P58397 1594 aa32.98■■■□□ 2.87
PPP1R3F-203ENST00000466508 PPARGC1BQ86YN6 1023 aaKnown RBP32.97■■■□□ 2.87
PPP1R3F-203ENST00000466508 FHAD1B1AJZ9 1412 aa32.95■■■□□ 2.86
PPP1R3F-203ENST00000466508 EFCAB5A4FU69 1503 aa32.83■■■□□ 2.85
PPP1R3F-203ENST00000466508 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
PPP1R3F-203ENST00000466508 APLP2Q06481 763 aa32.75■■■□□ 2.83
PPP1R3F-203ENST00000466508 MAGI1Q96QZ7 1491 aaPredicted RBP32.75■■■□□ 2.83
PPP1R3F-203ENST00000466508 SAMD9Q5K651 1589 aa32.69■■■□□ 2.82
PPP1R3F-203ENST00000466508 TTBK1Q5TCY1 1321 aaPredicted RBP32.68■■■□□ 2.82
PPP1R3F-203ENST00000466508 OSCARQ8IYS5 282 aa32.65■■■□□ 2.82
PPP1R3F-203ENST00000466508 GRIN2AQ12879 1464 aa32.65■■■□□ 2.82
PPP1R3F-203ENST00000466508 IQGAP2Q13576 1575 aa32.64■■■□□ 2.82
PPP1R3F-203ENST00000466508 FHOD3Q2V2M9 1422 aa32.62■■■□□ 2.81
PPP1R3F-203ENST00000466508 SYNJ2O15056 1496 aa32.61■■■□□ 2.81
PPP1R3F-203ENST00000466508 P3H3Q8IVL6 736 aa32.58■■■□□ 2.81
PPP1R3F-203ENST00000466508 PCF11O94913 1555 aaKnown RBP32.56■■■□□ 2.8
PPP1R3F-203ENST00000466508 MAP3K1Q13233 1512 aa32.53■■■□□ 2.8
PPP1R3F-203ENST00000466508 FMN1Q68DA7 1419 aa32.51■■■□□ 2.8
PPP1R3F-203ENST00000466508 KIAA0586Q9BVV6 1533 aa32.51■■■□□ 2.8
PPP1R3F-203ENST00000466508 FYCO1Q9BQS8 1478 aa32.49■■■□□ 2.79
PPP1R3F-203ENST00000466508 TIAM1Q13009 1591 aa32.49■■■□□ 2.79
PPP1R3F-203ENST00000466508 UGGT2Q9NYU1 1516 aa32.48■■■□□ 2.79
PPP1R3F-203ENST00000466508 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
PPP1R3F-203ENST00000466508 FBLN2P98095 1184 aa32.47■■■□□ 2.79
PPP1R3F-203ENST00000466508 CASKIN1Q8WXD9 1431 aa32.46■■■□□ 2.79
PPP1R3F-203ENST00000466508 CEP170Q5SW79 1584 aa32.44■■■□□ 2.78
PPP1R3F-203ENST00000466508 CFAP43Q8NDM7 1665 aa32.44■■■□□ 2.78
PPP1R3F-203ENST00000466508 KANK4Q5T7N3 995 aaPredicted RBP32.44■■■□□ 2.78
PPP1R3F-203ENST00000466508 CHD1O14646 1710 aa32.42■■■□□ 2.78
PPP1R3F-203ENST00000466508 HRCP23327 699 aa32.4■■■□□ 2.78
PPP1R3F-203ENST00000466508 NUP160Q12769 1436 aa32.39■■■□□ 2.78
PPP1R3F-203ENST00000466508 LRRC9Q6ZRR7 1453 aa32.31■■■□□ 2.76
PPP1R3F-203ENST00000466508 KIAA0556O60303 1618 aa32.31■■■□□ 2.76
PPP1R3F-203ENST00000466508 DISP1Q96F81 1524 aa32.29■■■□□ 2.76
PPP1R3F-203ENST00000466508 ATP1B4Q9UN42 357 aaPredicted RBP32.26■■■□□ 2.75
PPP1R3F-203ENST00000466508 LRRIQ1Q96JM4 1722 aa32.25■■■□□ 2.75
PPP1R3F-203ENST00000466508 HECW1Q76N89 1606 aa32.18■■■□□ 2.74
PPP1R3F-203ENST00000466508 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
PPP1R3F-203ENST00000466508 CCDC18Q5T9S5 1454 aa32.12■■■□□ 2.73
PPP1R3F-203ENST00000466508 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
PPP1R3F-203ENST00000466508 CARMIL2Q6F5E8 1435 aa32.09■■■□□ 2.73
PPP1R3F-203ENST00000466508 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
PPP1R3F-203ENST00000466508 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
PPP1R3F-203ENST00000466508 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
PPP1R3F-203ENST00000466508 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
PPP1R3F-203ENST00000466508 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
PPP1R3F-203ENST00000466508 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
PPP1R3F-203ENST00000466508 EPRSP07814 1512 aaKnown RBP32.03■■■□□ 2.72
PPP1R3F-203ENST00000466508 RAPGEF6Q8TEU7 1601 aa32.02■■■□□ 2.72
PPP1R3F-203ENST00000466508 MTUS2Q5JR59 1369 aa32.01■■■□□ 2.72
PPP1R3F-203ENST00000466508 PHLDB1Q86UU1 1377 aa32.01■■■□□ 2.72
PPP1R3F-203ENST00000466508 EHBP1L1Q8N3D4 1523 aa32■■■□□ 2.71
PPP1R3F-203ENST00000466508 HNRNPUL2Q1KMD3 747 aaKnown RBP32■■■□□ 2.71
PPP1R3F-203ENST00000466508 SHROOM2Q13796 1616 aa31.95■■■□□ 2.71
PPP1R3F-203ENST00000466508 SUPT6HQ7KZ85 1726 aaKnown RBP31.95■■■□□ 2.7
PPP1R3F-203ENST00000466508 CDK13Q14004 1512 aaKnown RBP31.94■■■□□ 2.7
PPP1R3F-203ENST00000466508 NUP153P49790 1475 aaKnown RBP31.94■■■□□ 2.7
PPP1R3F-203ENST00000466508 MAGI3Q5TCQ9 1506 aa31.93■■■□□ 2.7
PPP1R3F-203ENST00000466508 ZEB1P37275 1124 aaPredicted RBP31.93■■■□□ 2.7
PPP1R3F-203ENST00000466508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.91■■■□□ 2.7
PPP1R3F-203ENST00000466508 PRG4Q92954 1404 aaPredicted RBP31.91■■■□□ 2.7
PPP1R3F-203ENST00000466508 NCOA2Q15596 1464 aa31.87■■■□□ 2.69
PPP1R3F-203ENST00000466508 PLB1Q6P1J6 1458 aa31.87■■■□□ 2.69
PPP1R3F-203ENST00000466508 CYB5RLQ6IPT4 315 aa31.84■■■□□ 2.69
PPP1R3F-203ENST00000466508 CCER1Q8TC90 406 aaPredicted RBP31.83■■■□□ 2.69
PPP1R3F-203ENST00000466508 ABCA8O94911 1581 aa31.82■■■□□ 2.68
PPP1R3F-203ENST00000466508 FGD6Q6ZV73 1430 aa31.79■■■□□ 2.68
PPP1R3F-203ENST00000466508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.78■■■□□ 2.68
PPP1R3F-203ENST00000466508 ARID3CA6NKF2 412 aa31.76■■■□□ 2.68
PPP1R3F-203ENST00000466508 MYOM3Q5VTT5 1437 aa31.76■■■□□ 2.67
PPP1R3F-203ENST00000466508 PTPRGP23470 1445 aa31.73■■■□□ 2.67
PPP1R3F-203ENST00000466508 FAM50AQ14320 339 aaKnown RBP31.71■■■□□ 2.67
PPP1R3F-203ENST00000466508 CDK11AQ9UQ88 783 aaPredicted RBP31.69■■■□□ 2.66
PPP1R3F-203ENST00000466508 ERCC6L2Q5T890 1561 aa31.67■■■□□ 2.66
PPP1R3F-203ENST00000466508 ITGAEP38570 1179 aa31.66■■■□□ 2.66
PPP1R3F-203ENST00000466508 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
PPP1R3F-203ENST00000466508 PTPN23Q9H3S7 1636 aa31.62■■■□□ 2.65
PPP1R3F-203ENST00000466508 ADCY10Q96PN6 1610 aa31.6■■■□□ 2.65
PPP1R3F-203ENST00000466508 ATP10BO94823 1461 aa31.59■■■□□ 2.65
PPP1R3F-203ENST00000466508 MIA2Q96PC5 1412 aa31.56■■■□□ 2.64
PPP1R3F-203ENST00000466508 TCOF1Q13428 1488 aaKnown RBP31.56■■■□□ 2.64
PPP1R3F-203ENST00000466508 UACAQ9BZF9 1416 aa31.56■■■□□ 2.64
PPP1R3F-203ENST00000466508 KIF14Q15058 1648 aa31.5■■■□□ 2.63
PPP1R3F-203ENST00000466508 ABCC2Q92887 1545 aa31.5■■■□□ 2.63
PPP1R3F-203ENST00000466508 SETD5Q9C0A6 1442 aa31.47■■■□□ 2.63
PPP1R3F-203ENST00000466508 ITSN2Q9NZM3 1697 aa31.47■■■□□ 2.63
PPP1R3F-203ENST00000466508 RAB3GAP2Q9H2M9 1393 aa31.46■■■□□ 2.63
PPP1R3F-203ENST00000466508 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
PPP1R3F-203ENST00000466508 DHX57Q6P158 1386 aaKnown RBP31.43■■■□□ 2.62
PPP1R3F-203ENST00000466508 PTPRKQ15262 1439 aa31.41■■■□□ 2.62
PPP1R3F-203ENST00000466508 UHRF1BP1LA0JNW5 1464 aa31.39■■■□□ 2.62
PPP1R3F-203ENST00000466508 GPATCH8Q9UKJ3 1502 aaKnown RBP31.37■■■□□ 2.61
PPP1R3F-203ENST00000466508 CLSPNQ9HAW4 1339 aa31.36■■■□□ 2.61
PPP1R3F-203ENST00000466508 ABCC10Q5T3U5 1492 aa31.35■■■□□ 2.61
PPP1R3F-203ENST00000466508 HFM1A2PYH4 1435 aa31.34■■■□□ 2.61
PPP1R3F-203ENST00000466508 CDC42BPAQ5VT25 1732 aa31.34■■■□□ 2.61
PPP1R3F-203ENST00000466508 DNMT1P26358 1616 aaKnown RBP31.29■■■□□ 2.6
PPP1R3F-203ENST00000466508 ZCCHC11Q5TAX3 1644 aaKnown RBP31.29■■■□□ 2.6
PPP1R3F-203ENST00000466508 KDM5BQ9UGL1 1544 aa31.27■■■□□ 2.6
PPP1R3F-203ENST00000466508 TRHP20396 242 aaPredicted RBP31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms