RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
POLR2J3-203ENST00000464525 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
POLR2J3-203ENST00000464525 CCER1Q8TC90 406 aaPredicted RBP30.11■■■□□ 2.41
POLR2J3-203ENST00000464525 EIF4G3O43432 1585 aaKnown RBP30.1■■■□□ 2.41
POLR2J3-203ENST00000464525 ARHGAP35Q9NRY4 1499 aa30.02■■■□□ 2.4
POLR2J3-203ENST00000464525 FHAD1B1AJZ9 1412 aa30.02■■■□□ 2.4
POLR2J3-203ENST00000464525 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
POLR2J3-203ENST00000464525 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
POLR2J3-203ENST00000464525 CTTNBP2Q8WZ74 1663 aa29.96■■■□□ 2.39
POLR2J3-203ENST00000464525 HNRNPUL2Q1KMD3 747 aaKnown RBP29.96■■■□□ 2.39
POLR2J3-203ENST00000464525 P3H3Q8IVL6 736 aa29.95■■■□□ 2.38
POLR2J3-203ENST00000464525 KANK4Q5T7N3 995 aaPredicted RBP29.93■■■□□ 2.38
POLR2J3-203ENST00000464525 FBLN2P98095 1184 aa29.83■■■□□ 2.37
POLR2J3-203ENST00000464525 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
POLR2J3-203ENST00000464525 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
POLR2J3-203ENST00000464525 FHOD3Q2V2M9 1422 aa29.79■■■□□ 2.36
POLR2J3-203ENST00000464525 GRIN2AQ12879 1464 aa29.77■■■□□ 2.36
POLR2J3-203ENST00000464525 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
POLR2J3-203ENST00000464525 EFCAB5A4FU69 1503 aa29.72■■■□□ 2.35
POLR2J3-203ENST00000464525 IQGAP2Q13576 1575 aa29.69■■■□□ 2.34
POLR2J3-203ENST00000464525 SAMD9Q5K651 1589 aa29.65■■■□□ 2.34
POLR2J3-203ENST00000464525 ATP1B4Q9UN42 357 aaPredicted RBP29.64■■■□□ 2.34
POLR2J3-203ENST00000464525 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
POLR2J3-203ENST00000464525 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
POLR2J3-203ENST00000464525 PCF11O94913 1555 aaKnown RBP29.58■■■□□ 2.33
POLR2J3-203ENST00000464525 TIAM1Q13009 1591 aa29.53■■■□□ 2.32
POLR2J3-203ENST00000464525 FMN1Q68DA7 1419 aa29.51■■■□□ 2.32
POLR2J3-203ENST00000464525 NUP160Q12769 1436 aa29.51■■■□□ 2.31
POLR2J3-203ENST00000464525 RRBP1Q9P2E9 1410 aaKnown RBP29.5■■■□□ 2.31
POLR2J3-203ENST00000464525 UGGT2Q9NYU1 1516 aa29.5■■■□□ 2.31
POLR2J3-203ENST00000464525 CASKIN1Q8WXD9 1431 aa29.46■■■□□ 2.31
POLR2J3-203ENST00000464525 CHD1O14646 1710 aa29.46■■■□□ 2.31
POLR2J3-203ENST00000464525 CCNB3Q8WWL7 1395 aa29.44■■■□□ 2.3
POLR2J3-203ENST00000464525 FYCO1Q9BQS8 1478 aa29.44■■■□□ 2.3
POLR2J3-203ENST00000464525 LRRC9Q6ZRR7 1453 aa29.44■■■□□ 2.3
POLR2J3-203ENST00000464525 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
POLR2J3-203ENST00000464525 ITGAEP38570 1179 aa29.44■■■□□ 2.3
POLR2J3-203ENST00000464525 DISP1Q96F81 1524 aa29.43■■■□□ 2.3
POLR2J3-203ENST00000464525 JPH4Q96JJ6 628 aa29.4■■■□□ 2.3
POLR2J3-203ENST00000464525 KIAA0556O60303 1618 aa29.4■■■□□ 2.3
POLR2J3-203ENST00000464525 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
POLR2J3-203ENST00000464525 CFAP43Q8NDM7 1665 aa29.33■■■□□ 2.29
POLR2J3-203ENST00000464525 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
POLR2J3-203ENST00000464525 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
POLR2J3-203ENST00000464525 CARMIL2Q6F5E8 1435 aa29.25■■■□□ 2.27
POLR2J3-203ENST00000464525 DHX57Q6P158 1386 aaKnown RBP29.24■■■□□ 2.27
POLR2J3-203ENST00000464525 FAM50AQ14320 339 aaKnown RBP29.22■■■□□ 2.27
POLR2J3-203ENST00000464525 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.26
POLR2J3-203ENST00000464525 HECW1Q76N89 1606 aa29.2■■■□□ 2.26
POLR2J3-203ENST00000464525 MTUS2Q5JR59 1369 aa29.17■■■□□ 2.26
POLR2J3-203ENST00000464525 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
POLR2J3-203ENST00000464525 EPRSP07814 1512 aaKnown RBP29.15■■■□□ 2.26
POLR2J3-203ENST00000464525 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.25
POLR2J3-203ENST00000464525 DIEXFQ68CQ4 756 aaKnown RBP29.12■■■□□ 2.25
POLR2J3-203ENST00000464525 RAPGEF6Q8TEU7 1601 aa29.11■■■□□ 2.25
POLR2J3-203ENST00000464525 CCDC18Q5T9S5 1454 aa29.11■■■□□ 2.25
POLR2J3-203ENST00000464525 NUP153P49790 1475 aaKnown RBP29.09■■■□□ 2.25
POLR2J3-203ENST00000464525 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
POLR2J3-203ENST00000464525 MAGI3Q5TCQ9 1506 aa29.09■■■□□ 2.25
POLR2J3-203ENST00000464525 RAB3GAP2Q9H2M9 1393 aa29.08■■■□□ 2.25
POLR2J3-203ENST00000464525 SHROOM2Q13796 1616 aa29.06■■■□□ 2.24
POLR2J3-203ENST00000464525 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
POLR2J3-203ENST00000464525 CLASP1Q7Z460 1538 aa29.04■■■□□ 2.24
POLR2J3-203ENST00000464525 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
POLR2J3-203ENST00000464525 PTPRGP23470 1445 aa29.01■■■□□ 2.23
POLR2J3-203ENST00000464525 EHBP1L1Q8N3D4 1523 aa29■■■□□ 2.23
POLR2J3-203ENST00000464525 SETD5Q9C0A6 1442 aa28.99■■■□□ 2.23
POLR2J3-203ENST00000464525 NCOA2Q15596 1464 aa28.98■■■□□ 2.23
POLR2J3-203ENST00000464525 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
POLR2J3-203ENST00000464525 ABCA8O94911 1581 aa28.95■■■□□ 2.22
POLR2J3-203ENST00000464525 SUPT6HQ7KZ85 1726 aaKnown RBP28.95■■■□□ 2.22
POLR2J3-203ENST00000464525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.87■■■□□ 2.21
POLR2J3-203ENST00000464525 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
POLR2J3-203ENST00000464525 MYOM3Q5VTT5 1437 aa28.85■■■□□ 2.21
POLR2J3-203ENST00000464525 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
POLR2J3-203ENST00000464525 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
POLR2J3-203ENST00000464525 MAPKBP1O60336 1514 aa28.84■■■□□ 2.21
POLR2J3-203ENST00000464525 ATP10BO94823 1461 aa28.83■■■□□ 2.21
POLR2J3-203ENST00000464525 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
POLR2J3-203ENST00000464525 UACAQ9BZF9 1416 aa28.81■■■□□ 2.2
POLR2J3-203ENST00000464525 TROQ12816 1431 aaPredicted RBP28.77■■■□□ 2.2
POLR2J3-203ENST00000464525 PLEKHD1A6NEE1 506 aa28.75■■■□□ 2.19
POLR2J3-203ENST00000464525 SIN3AQ96ST3 1273 aa28.73■■■□□ 2.19
POLR2J3-203ENST00000464525 KIF14Q15058 1648 aa28.71■■■□□ 2.19
POLR2J3-203ENST00000464525 PTPN23Q9H3S7 1636 aa28.71■■■□□ 2.19
POLR2J3-203ENST00000464525 ABCC2Q92887 1545 aa28.69■■■□□ 2.18
POLR2J3-203ENST00000464525 NEUROD1Q13562 356 aa28.69■■■□□ 2.18
POLR2J3-203ENST00000464525 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
POLR2J3-203ENST00000464525 HFM1A2PYH4 1435 aa28.63■■■□□ 2.17
POLR2J3-203ENST00000464525 MIER1Q8N108 512 aa28.62■■■□□ 2.17
POLR2J3-203ENST00000464525 ADCY10Q96PN6 1610 aa28.61■■■□□ 2.17
POLR2J3-203ENST00000464525 ZNF644Q9H582 1327 aaPredicted RBP28.61■■■□□ 2.17
POLR2J3-203ENST00000464525 NAIPQ13075 1403 aa28.61■■■□□ 2.17
POLR2J3-203ENST00000464525 MIA2Q96PC5 1412 aa28.61■■■□□ 2.17
POLR2J3-203ENST00000464525 RRP7BPQ9NSQ0 103 aa28.6■■■□□ 2.17
POLR2J3-203ENST00000464525 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
POLR2J3-203ENST00000464525 GPATCH8Q9UKJ3 1502 aaKnown RBP28.56■■■□□ 2.16
POLR2J3-203ENST00000464525 CFDP1Q9UEE9 299 aaPredicted RBP28.55■■■□□ 2.16
POLR2J3-203ENST00000464525 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
POLR2J3-203ENST00000464525 UHRF1BP1LA0JNW5 1464 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms