RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 NISCHQ9Y2I1 1504 aa43.3■■■■■ 4.52
POLR2J3-203ENST00000464525 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
POLR2J3-203ENST00000464525 ZCCHC6Q5VYS8 1495 aaKnown RBP36.35■■■■□ 3.41
POLR2J3-203ENST00000464525 DCAF8L2P0C7V8 631 aa36.11■■■■□ 3.37
POLR2J3-203ENST00000464525 ABCC9O60706 1549 aa35.86■■■■□ 3.33
POLR2J3-203ENST00000464525 SHROOM4Q9ULL8 1493 aa35.82■■■■□ 3.32
POLR2J3-203ENST00000464525 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
POLR2J3-203ENST00000464525 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
POLR2J3-203ENST00000464525 NACADO15069 1562 aa35.06■■■■□ 3.2
POLR2J3-203ENST00000464525 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
POLR2J3-203ENST00000464525 SUPT5HO00267 1087 aaKnown RBP34.82■■■■□ 3.16
POLR2J3-203ENST00000464525 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
POLR2J3-203ENST00000464525 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
POLR2J3-203ENST00000464525 PABPN1Q86U42 306 aaKnown RBP eCLIP33.92■■■■□ 3.02
POLR2J3-203ENST00000464525 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
POLR2J3-203ENST00000464525 CECR2Q9BXF3 1484 aa33.79■■■■□ 3
POLR2J3-203ENST00000464525 RSF1Q96T23 1441 aaPredicted RBP33.66■■■□□ 2.98
POLR2J3-203ENST00000464525 MROH2BQ7Z745 1585 aa33.54■■■□□ 2.96
POLR2J3-203ENST00000464525 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
POLR2J3-203ENST00000464525 BAZ1AQ9NRL2 1556 aaPredicted RBP33.39■■■□□ 2.94
POLR2J3-203ENST00000464525 WIZO95785 1651 aa33.29■■■□□ 2.92
POLR2J3-203ENST00000464525 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
POLR2J3-203ENST00000464525 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
POLR2J3-203ENST00000464525 EIF4G1Q04637 1599 aaKnown RBP32.8■■■□□ 2.84
POLR2J3-203ENST00000464525 PEG3Q9GZU2 1588 aa32.76■■■□□ 2.84
POLR2J3-203ENST00000464525 ATAD2BQ9ULI0 1458 aa32.75■■■□□ 2.83
POLR2J3-203ENST00000464525 SMARCA2P51531 1590 aa32.65■■■□□ 2.82
POLR2J3-203ENST00000464525 BAZ1BQ9UIG0 1483 aaKnown RBP32.58■■■□□ 2.81
POLR2J3-203ENST00000464525 CCDC88BA6NC98 1476 aa32.58■■■□□ 2.81
POLR2J3-203ENST00000464525 LOC105371045A0A1W2PR82 267 aa32.54■■■□□ 2.8
POLR2J3-203ENST00000464525 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
POLR2J3-203ENST00000464525 NCAPD3P42695 1498 aa32.4■■■□□ 2.78
POLR2J3-203ENST00000464525 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
POLR2J3-203ENST00000464525 HMGXB3Q12766 1538 aa32.32■■■□□ 2.76
POLR2J3-203ENST00000464525 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
POLR2J3-203ENST00000464525 ABCC8Q09428 1581 aa31.99■■■□□ 2.71
POLR2J3-203ENST00000464525 EHMT2Q96KQ7 1210 aa31.95■■■□□ 2.71
POLR2J3-203ENST00000464525 PCGF6Q9BYE7 350 aa31.81■■■□□ 2.68
POLR2J3-203ENST00000464525 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
POLR2J3-203ENST00000464525 CFTRP13569 1480 aa31.72■■■□□ 2.67
POLR2J3-203ENST00000464525 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.661e-6■■■■■ 58.5
POLR2J3-203ENST00000464525 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
POLR2J3-203ENST00000464525 SYNJ1O43426 1573 aa31.57■■■□□ 2.64
POLR2J3-203ENST00000464525 NESP48681 1621 aa31.5■■■□□ 2.63
POLR2J3-203ENST00000464525 SOGA1O94964 1423 aa31.47■■■□□ 2.63
POLR2J3-203ENST00000464525 PRDM2Q13029 1718 aa31.47■■■□□ 2.63
POLR2J3-203ENST00000464525 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
POLR2J3-203ENST00000464525 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
POLR2J3-203ENST00000464525 CUX1P39880 1505 aa31.34■■■□□ 2.61
POLR2J3-203ENST00000464525 TRIM26Q12899 539 aaPredicted RBP31.33■■■□□ 2.61
POLR2J3-203ENST00000464525 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
POLR2J3-203ENST00000464525 HRCP23327 699 aa31.31■■■□□ 2.6
POLR2J3-203ENST00000464525 BIVM-ERCC5R4GMW8 1640 aa31.28■■■□□ 2.6
POLR2J3-203ENST00000464525 LAMC3Q9Y6N6 1575 aa31.27■■■□□ 2.6
POLR2J3-203ENST00000464525 CSRNP3Q8WYN3 585 aa31.22■■■□□ 2.59
POLR2J3-203ENST00000464525 EEA1Q15075 1411 aa31.13■■■□□ 2.57
POLR2J3-203ENST00000464525 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
POLR2J3-203ENST00000464525 CEP164Q9UPV0 1460 aa31.09■■■□□ 2.57
POLR2J3-203ENST00000464525 PDS5BQ9NTI5 1447 aa31.08■■■□□ 2.57
POLR2J3-203ENST00000464525 UBTFP17480 764 aaKnown RBP31.03■■■□□ 2.56
POLR2J3-203ENST00000464525 KIF21AQ7Z4S6 1674 aa31.02■■■□□ 2.56
POLR2J3-203ENST00000464525 FGD5Q6ZNL6 1462 aa31■■■□□ 2.55
POLR2J3-203ENST00000464525 CEP162Q5TB80 1403 aa30.98■■■□□ 2.55
POLR2J3-203ENST00000464525 TNIKQ9UKE5 1360 aa30.97■■■□□ 2.55
POLR2J3-203ENST00000464525 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
POLR2J3-203ENST00000464525 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
POLR2J3-203ENST00000464525 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
POLR2J3-203ENST00000464525 GOLGA3Q08378 1498 aa30.91■■■□□ 2.54
POLR2J3-203ENST00000464525 POLA1P09884 1462 aaPredicted RBP30.84■■■□□ 2.53
POLR2J3-203ENST00000464525 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
POLR2J3-203ENST00000464525 CUX2O14529 1486 aa30.83■■■□□ 2.53
POLR2J3-203ENST00000464525 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
POLR2J3-203ENST00000464525 KIF21BO75037 1637 aa30.76■■■□□ 2.51
POLR2J3-203ENST00000464525 TTBK1Q5TCY1 1321 aaPredicted RBP30.73■■■□□ 2.51
POLR2J3-203ENST00000464525 RAPGEF2Q9Y4G8 1499 aa30.72■■■□□ 2.51
POLR2J3-203ENST00000464525 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
POLR2J3-203ENST00000464525 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
POLR2J3-203ENST00000464525 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
POLR2J3-203ENST00000464525 PRXQ9BXM0 1461 aa30.62■■■□□ 2.49
POLR2J3-203ENST00000464525 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
POLR2J3-203ENST00000464525 IGF1RP08069 1367 aa30.61■■■□□ 2.49
POLR2J3-203ENST00000464525 CLIP1P30622 1438 aa30.55■■■□□ 2.48
POLR2J3-203ENST00000464525 TDRD9Q8NDG6 1382 aaKnown RBP30.55■■■□□ 2.48
POLR2J3-203ENST00000464525 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
POLR2J3-203ENST00000464525 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
POLR2J3-203ENST00000464525 WDR62O43379 1518 aa30.49■■■□□ 2.47
POLR2J3-203ENST00000464525 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
POLR2J3-203ENST00000464525 CARMIL1Q5VZK9 1371 aa30.46■■■□□ 2.47
POLR2J3-203ENST00000464525 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
POLR2J3-203ENST00000464525 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
POLR2J3-203ENST00000464525 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
POLR2J3-203ENST00000464525 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.454e-8■■■■□ 22.5
POLR2J3-203ENST00000464525 VPS8Q8N3P4 1428 aa30.32■■■□□ 2.44
POLR2J3-203ENST00000464525 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
POLR2J3-203ENST00000464525 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
POLR2J3-203ENST00000464525 ZEB1P37275 1124 aaPredicted RBP30.29■■■□□ 2.44
POLR2J3-203ENST00000464525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.28■■■□□ 2.44
POLR2J3-203ENST00000464525 CUL7Q14999 1698 aa30.25■■■□□ 2.43
POLR2J3-203ENST00000464525 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
POLR2J3-203ENST00000464525 APLP2Q06481 763 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms