RNA–Protein interactions for RNA: ENST00000463820.5

NELFA-212, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-212ENST00000463820 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
NELFA-212ENST00000463820 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
NELFA-212ENST00000463820 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
NELFA-212ENST00000463820 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.632e-7■■■□□ 16.5
NELFA-212ENST00000463820 WDR62O43379 1518 aa25.2■■□□□ 1.62
NELFA-212ENST00000463820 ARHGAP35Q9NRY4 1499 aa25.18■■□□□ 1.62
NELFA-212ENST00000463820 CUL7Q14999 1698 aa25.16■■□□□ 1.62
NELFA-212ENST00000463820 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
NELFA-212ENST00000463820 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
NELFA-212ENST00000463820 APLP2Q06481 763 aa25.09■■□□□ 1.61
NELFA-212ENST00000463820 P3H3Q8IVL6 736 aa25.08■■□□□ 1.61
NELFA-212ENST00000463820 YTHDC1Q96MU7 727 aaKnown RBP25.08■■□□□ 1.61
NELFA-212ENST00000463820 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
NELFA-212ENST00000463820 MIER1Q8N108 512 aa25.06■■□□□ 1.6
NELFA-212ENST00000463820 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
NELFA-212ENST00000463820 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
NELFA-212ENST00000463820 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
NELFA-212ENST00000463820 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
NELFA-212ENST00000463820 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
NELFA-212ENST00000463820 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
NELFA-212ENST00000463820 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
NELFA-212ENST00000463820 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
NELFA-212ENST00000463820 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
NELFA-212ENST00000463820 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
NELFA-212ENST00000463820 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
NELFA-212ENST00000463820 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
NELFA-212ENST00000463820 PCF11O94913 1555 aaKnown RBP24.78■■□□□ 1.56
NELFA-212ENST00000463820 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
NELFA-212ENST00000463820 FBLN2P98095 1184 aa24.75■■□□□ 1.55
NELFA-212ENST00000463820 SAMD9Q5K651 1589 aa24.74■■□□□ 1.55
NELFA-212ENST00000463820 GRIN2AQ12879 1464 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
NELFA-212ENST00000463820 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
NELFA-212ENST00000463820 MYT1Q01538 1121 aa24.68■■□□□ 1.54
NELFA-212ENST00000463820 FMN1Q68DA7 1419 aa24.66■■□□□ 1.54
NELFA-212ENST00000463820 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
NELFA-212ENST00000463820 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
NELFA-212ENST00000463820 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.54
NELFA-212ENST00000463820 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
NELFA-212ENST00000463820 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
NELFA-212ENST00000463820 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
NELFA-212ENST00000463820 KIAA0586Q9BVV6 1533 aa24.61■■□□□ 1.53
NELFA-212ENST00000463820 CEP170Q5SW79 1584 aa24.58■■□□□ 1.53
NELFA-212ENST00000463820 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
NELFA-212ENST00000463820 UGGT2Q9NYU1 1516 aa24.55■■□□□ 1.52
NELFA-212ENST00000463820 PHLDB1Q86UU1 1377 aa24.53■■□□□ 1.52
NELFA-212ENST00000463820 LRRIQ1Q96JM4 1722 aa24.53■■□□□ 1.52
NELFA-212ENST00000463820 DISP1Q96F81 1524 aa24.52■■□□□ 1.52
NELFA-212ENST00000463820 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
NELFA-212ENST00000463820 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
NELFA-212ENST00000463820 ITGAEP38570 1179 aa24.5■■□□□ 1.51
NELFA-212ENST00000463820 NUP160Q12769 1436 aa24.48■■□□□ 1.51
NELFA-212ENST00000463820 KIAA0556O60303 1618 aa24.47■■□□□ 1.51
NELFA-212ENST00000463820 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
NELFA-212ENST00000463820 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
NELFA-212ENST00000463820 CDK13Q14004 1512 aaKnown RBP24.37■■□□□ 1.49
NELFA-212ENST00000463820 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
NELFA-212ENST00000463820 MAGI3Q5TCQ9 1506 aa24.37■■□□□ 1.49
NELFA-212ENST00000463820 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
NELFA-212ENST00000463820 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
NELFA-212ENST00000463820 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
NELFA-212ENST00000463820 CHD1O14646 1710 aa24.34■■□□□ 1.49
NELFA-212ENST00000463820 MAPKBP1O60336 1514 aa24.33■■□□□ 1.49
NELFA-212ENST00000463820 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
NELFA-212ENST00000463820 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
NELFA-212ENST00000463820 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
NELFA-212ENST00000463820 PLB1Q6P1J6 1458 aa24.29■■□□□ 1.48
NELFA-212ENST00000463820 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
NELFA-212ENST00000463820 NUP153P49790 1475 aaKnown RBP24.28■■□□□ 1.48
NELFA-212ENST00000463820 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
NELFA-212ENST00000463820 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
NELFA-212ENST00000463820 RAPGEF6Q8TEU7 1601 aa24.25■■□□□ 1.47
NELFA-212ENST00000463820 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
NELFA-212ENST00000463820 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
NELFA-212ENST00000463820 SETD5Q9C0A6 1442 aa24.22■■□□□ 1.47
NELFA-212ENST00000463820 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
NELFA-212ENST00000463820 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
NELFA-212ENST00000463820 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
NELFA-212ENST00000463820 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
NELFA-212ENST00000463820 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
NELFA-212ENST00000463820 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
NELFA-212ENST00000463820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.457e-7■■■■■ 52.8
NELFA-212ENST00000463820 PTPRGP23470 1445 aa24.09■■□□□ 1.45
NELFA-212ENST00000463820 PTPRKQ15262 1439 aa24.09■■□□□ 1.45
NELFA-212ENST00000463820 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
NELFA-212ENST00000463820 ABCA8O94911 1581 aa24.07■■□□□ 1.44
NELFA-212ENST00000463820 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
NELFA-212ENST00000463820 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
NELFA-212ENST00000463820 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
NELFA-212ENST00000463820 ATP10BO94823 1461 aa24.02■■□□□ 1.44
NELFA-212ENST00000463820 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
NELFA-212ENST00000463820 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
NELFA-212ENST00000463820 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
NELFA-212ENST00000463820 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
NELFA-212ENST00000463820 ZNF644Q9H582 1327 aaPredicted RBP23.99■■□□□ 1.43
NELFA-212ENST00000463820 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
NELFA-212ENST00000463820 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
NELFA-212ENST00000463820 KIF14Q15058 1648 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms