RNA–Protein interactions for RNA: ENST00000463820.5

NELFA-212, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-212ENST00000463820 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
NELFA-212ENST00000463820 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
NELFA-212ENST00000463820 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
NELFA-212ENST00000463820 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
NELFA-212ENST00000463820 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
NELFA-212ENST00000463820 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.33
NELFA-212ENST00000463820 ABCC9O60706 1549 aa29.63■■■□□ 2.33
NELFA-212ENST00000463820 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
NELFA-212ENST00000463820 NACADO15069 1562 aa29.01■■■□□ 2.23
NELFA-212ENST00000463820 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
NELFA-212ENST00000463820 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
NELFA-212ENST00000463820 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
NELFA-212ENST00000463820 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
NELFA-212ENST00000463820 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
NELFA-212ENST00000463820 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.11
NELFA-212ENST00000463820 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
NELFA-212ENST00000463820 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
NELFA-212ENST00000463820 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
NELFA-212ENST00000463820 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
NELFA-212ENST00000463820 HRCP23327 699 aa27.94■■■□□ 2.06
NELFA-212ENST00000463820 WIZO95785 1651 aa27.79■■■□□ 2.04
NELFA-212ENST00000463820 BAZ1AQ9NRL2 1556 aaPredicted RBP27.78■■■□□ 2.04
NELFA-212ENST00000463820 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
NELFA-212ENST00000463820 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
NELFA-212ENST00000463820 LOC105371045A0A1W2PR82 267 aa27.58■■■□□ 2.01
NELFA-212ENST00000463820 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
NELFA-212ENST00000463820 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
NELFA-212ENST00000463820 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
NELFA-212ENST00000463820 CCDC88BA6NC98 1476 aa27.21■■□□□ 1.95
NELFA-212ENST00000463820 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
NELFA-212ENST00000463820 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
NELFA-212ENST00000463820 EIF4G1Q04637 1599 aaKnown RBP27.12■■□□□ 1.93
NELFA-212ENST00000463820 TRIM26Q12899 539 aaPredicted RBP27.1■■□□□ 1.93
NELFA-212ENST00000463820 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
NELFA-212ENST00000463820 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
NELFA-212ENST00000463820 NCAPD3P42695 1498 aa26.85■■□□□ 1.89
NELFA-212ENST00000463820 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
NELFA-212ENST00000463820 FAM9AQ8IZU1 332 aaPredicted RBP26.81■■□□□ 1.88
NELFA-212ENST00000463820 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
NELFA-212ENST00000463820 ZEB1P37275 1124 aaPredicted RBP26.73■■□□□ 1.87
NELFA-212ENST00000463820 EHMT2Q96KQ7 1210 aa26.73■■□□□ 1.87
NELFA-212ENST00000463820 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
NELFA-212ENST00000463820 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
NELFA-212ENST00000463820 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
NELFA-212ENST00000463820 SOGA1O94964 1423 aa26.38■■□□□ 1.81
NELFA-212ENST00000463820 CFTRP13569 1480 aa26.37■■□□□ 1.81
NELFA-212ENST00000463820 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
NELFA-212ENST00000463820 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
NELFA-212ENST00000463820 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
NELFA-212ENST00000463820 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
NELFA-212ENST00000463820 CUX1P39880 1505 aa26.13■■□□□ 1.77
NELFA-212ENST00000463820 NESP48681 1621 aa26.12■■□□□ 1.77
NELFA-212ENST00000463820 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
NELFA-212ENST00000463820 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
NELFA-212ENST00000463820 PRDM2Q13029 1718 aa26.08■■□□□ 1.77
NELFA-212ENST00000463820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
NELFA-212ENST00000463820 EEA1Q15075 1411 aa26.05■■□□□ 1.76
NELFA-212ENST00000463820 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
NELFA-212ENST00000463820 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
NELFA-212ENST00000463820 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
NELFA-212ENST00000463820 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
NELFA-212ENST00000463820 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
NELFA-212ENST00000463820 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
NELFA-212ENST00000463820 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
NELFA-212ENST00000463820 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
NELFA-212ENST00000463820 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
NELFA-212ENST00000463820 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
NELFA-212ENST00000463820 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
NELFA-212ENST00000463820 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
NELFA-212ENST00000463820 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
NELFA-212ENST00000463820 KIF21BO75037 1637 aa25.76■■□□□ 1.71
NELFA-212ENST00000463820 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
NELFA-212ENST00000463820 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
NELFA-212ENST00000463820 CUX2O14529 1486 aa25.71■■□□□ 1.71
NELFA-212ENST00000463820 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.7
NELFA-212ENST00000463820 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
NELFA-212ENST00000463820 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
NELFA-212ENST00000463820 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
NELFA-212ENST00000463820 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
NELFA-212ENST00000463820 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
NELFA-212ENST00000463820 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.7
NELFA-212ENST00000463820 RANGAP1P46060 587 aaPredicted RBP25.64■■□□□ 1.7
NELFA-212ENST00000463820 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
NELFA-212ENST00000463820 DIEXFQ68CQ4 756 aaKnown RBP25.59■■□□□ 1.69
NELFA-212ENST00000463820 IGF1RP08069 1367 aa25.58■■□□□ 1.69
NELFA-212ENST00000463820 ACIN1Q9UKV3 1341 aaKnown RBP25.58■■□□□ 1.69
NELFA-212ENST00000463820 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
NELFA-212ENST00000463820 CLIP1P30622 1438 aa25.5■■□□□ 1.67
NELFA-212ENST00000463820 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
NELFA-212ENST00000463820 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
NELFA-212ENST00000463820 CENPBP07199 599 aaPredicted RBP25.42■■□□□ 1.66
NELFA-212ENST00000463820 TDRD9Q8NDG6 1382 aaKnown RBP25.42■■□□□ 1.66
NELFA-212ENST00000463820 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
NELFA-212ENST00000463820 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
NELFA-212ENST00000463820 GTF3C3Q9Y5Q9 886 aa25.34■■□□□ 1.65
NELFA-212ENST00000463820 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
NELFA-212ENST00000463820 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
NELFA-212ENST00000463820 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
NELFA-212ENST00000463820 HNRNPUL2Q1KMD3 747 aaKnown RBP25.27■■□□□ 1.64
NELFA-212ENST00000463820 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms