RNA–Protein interactions for RNA: ENST00000462496.5

MACF1-210, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-210ENST00000462496 CUX2O14529 1486 aa7.8□□□□□ -1.16
MACF1-210ENST00000462496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.79□□□□□ -1.16
MACF1-210ENST00000462496 HNRNPUL2Q1KMD3 747 aaKnown RBP7.79□□□□□ -1.16
MACF1-210ENST00000462496 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
MACF1-210ENST00000462496 SAMD1Q6SPF0 538 aaPredicted RBP7.78□□□□□ -1.16
MACF1-210ENST00000462496 ATF5Q9Y2D1 282 aaPredicted RBP7.78□□□□□ -1.16
MACF1-210ENST00000462496 IGF1RP08069 1367 aa7.78□□□□□ -1.16
MACF1-210ENST00000462496 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
MACF1-210ENST00000462496 ABCA10Q8WWZ4 1543 aa7.78□□□□□ -1.16
MACF1-210ENST00000462496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.77□□□□□ -1.178e-9■■■■■ 34.1
MACF1-210ENST00000462496 NESP48681 1621 aa7.77□□□□□ -1.17
MACF1-210ENST00000462496 WDR97A6NE52 1622 aa7.76□□□□□ -1.17
MACF1-210ENST00000462496 POLA1P09884 1462 aaPredicted RBP7.75□□□□□ -1.17
MACF1-210ENST00000462496 CUL7Q14999 1698 aa7.73□□□□□ -1.17
MACF1-210ENST00000462496 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
MACF1-210ENST00000462496 CARMIL1Q5VZK9 1371 aa7.73□□□□□ -1.17
MACF1-210ENST00000462496 PDS5BQ9NTI5 1447 aa7.73□□□□□ -1.17
MACF1-210ENST00000462496 U3KPZ7 1027 aaPredicted RBP7.73□□□□□ -1.17
MACF1-210ENST00000462496 ARHGAP35Q9NRY4 1499 aa7.73□□□□□ -1.17
MACF1-210ENST00000462496 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
MACF1-210ENST00000462496 RAD54L2Q9Y4B4 1467 aa7.71□□□□□ -1.18
MACF1-210ENST00000462496 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
MACF1-210ENST00000462496 KIF21AQ7Z4S6 1674 aa7.7□□□□□ -1.18
MACF1-210ENST00000462496 MAP3K1Q13233 1512 aa7.7□□□□□ -1.18
MACF1-210ENST00000462496 APLP2Q06481 763 aa7.7□□□□□ -1.18
MACF1-210ENST00000462496 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
MACF1-210ENST00000462496 CCER1Q8TC90 406 aaPredicted RBP7.68□□□□□ -1.18
MACF1-210ENST00000462496 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
MACF1-210ENST00000462496 TARBP1Q13395 1621 aaKnown RBP7.67□□□□□ -1.18
MACF1-210ENST00000462496 TTBK1Q5TCY1 1321 aaPredicted RBP7.67□□□□□ -1.18
MACF1-210ENST00000462496 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.18
MACF1-210ENST00000462496 TIAM1Q13009 1591 aa7.65□□□□□ -1.18
MACF1-210ENST00000462496 CFAP43Q8NDM7 1665 aa7.65□□□□□ -1.18
MACF1-210ENST00000462496 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.18
MACF1-210ENST00000462496 AQRO60306 1485 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■■□ 20.3
MACF1-210ENST00000462496 GAPVD1Q14C86 1478 aa7.64□□□□□ -1.19
MACF1-210ENST00000462496 FHAD1B1AJZ9 1412 aa7.64□□□□□ -1.19
MACF1-210ENST00000462496 MRC2Q9UBG0 1479 aa7.63□□□□□ -1.19
MACF1-210ENST00000462496 SAMD9Q5K651 1589 aa7.63□□□□□ -1.19
MACF1-210ENST00000462496 KANK4Q5T7N3 995 aaPredicted RBP7.62□□□□□ -1.19
MACF1-210ENST00000462496 PCF11O94913 1555 aaKnown RBP7.62□□□□□ -1.19
MACF1-210ENST00000462496 FYCO1Q9BQS8 1478 aa7.62□□□□□ -1.19
MACF1-210ENST00000462496 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
MACF1-210ENST00000462496 ZNF219Q9P2Y4 722 aaPredicted RBP7.61□□□□□ -1.19
MACF1-210ENST00000462496 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
MACF1-210ENST00000462496 TDRD9Q8NDG6 1382 aaKnown RBP7.6□□□□□ -1.19
MACF1-210ENST00000462496 WDR62O43379 1518 aa7.6□□□□□ -1.19
MACF1-210ENST00000462496 LRRC9Q6ZRR7 1453 aa7.6□□□□□ -1.19
MACF1-210ENST00000462496 ADAMTS12P58397 1594 aa7.59□□□□□ -1.2
MACF1-210ENST00000462496 IFT140Q96RY7 1462 aa7.58□□□□□ -1.2
MACF1-210ENST00000462496 FHOD3Q2V2M9 1422 aa7.58□□□□□ -1.2
MACF1-210ENST00000462496 FMN1Q68DA7 1419 aa7.58□□□□□ -1.2
MACF1-210ENST00000462496 CCNB3Q8WWL7 1395 aa7.58□□□□□ -1.2
MACF1-210ENST00000462496 THOC2Q8NI27 1593 aaKnown RBP7.57□□□□□ -1.2
MACF1-210ENST00000462496 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
MACF1-210ENST00000462496 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
MACF1-210ENST00000462496 CLSPNQ9HAW4 1339 aa7.56□□□□□ -1.2
MACF1-210ENST00000462496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.54□□□□□ -1.2
MACF1-210ENST00000462496 LRRIQ1Q96JM4 1722 aa7.53□□□□□ -1.2
MACF1-210ENST00000462496 FBXO3Q9UK99 471 aa7.53□□□□□ -1.2
MACF1-210ENST00000462496 DHX57Q6P158 1386 aaKnown RBP7.53□□□□□ -1.2
MACF1-210ENST00000462496 IQGAP2Q13576 1575 aa7.53□□□□□ -1.2
MACF1-210ENST00000462496 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
MACF1-210ENST00000462496 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
MACF1-210ENST00000462496 PROM2Q8N271 834 aa7.52□□□□□ -1.21
MACF1-210ENST00000462496 UGGT2Q9NYU1 1516 aa7.52□□□□□ -1.21
MACF1-210ENST00000462496 EIF4G3O43432 1585 aaKnown RBP7.51□□□□□ -1.21
MACF1-210ENST00000462496 ZNF608Q9ULD9 1512 aaPredicted RBP7.51□□□□□ -1.21
MACF1-210ENST00000462496 CCDC18Q5T9S5 1454 aa7.5□□□□□ -1.21
MACF1-210ENST00000462496 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
MACF1-210ENST00000462496 HECW1Q76N89 1606 aa7.49□□□□□ -1.21
MACF1-210ENST00000462496 EHBP1L1Q8N3D4 1523 aa7.49□□□□□ -1.21
MACF1-210ENST00000462496 ARHGEF11O15085 1522 aa7.48□□□□□ -1.21
MACF1-210ENST00000462496 KIAA0586Q9BVV6 1533 aa7.48□□□□□ -1.21
MACF1-210ENST00000462496 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
MACF1-210ENST00000462496 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
MACF1-210ENST00000462496 SUPT6HQ7KZ85 1726 aaKnown RBP7.48□□□□□ -1.21
MACF1-210ENST00000462496 SETD5Q9C0A6 1442 aa7.48□□□□□ -1.21
MACF1-210ENST00000462496 ERCC6Q03468 1493 aa7.48□□□□□ -1.21
MACF1-210ENST00000462496 MAGI1Q96QZ7 1491 aaPredicted RBP7.48□□□□□ -1.21
MACF1-210ENST00000462496 FGD6Q6ZV73 1430 aa7.47□□□□□ -1.21
MACF1-210ENST00000462496 GRIN2AQ12879 1464 aa7.47□□□□□ -1.21
MACF1-210ENST00000462496 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.21
MACF1-210ENST00000462496 KIAA0556O60303 1618 aa7.46□□□□□ -1.21
MACF1-210ENST00000462496 NCOA2Q15596 1464 aa7.46□□□□□ -1.22
MACF1-210ENST00000462496 MTUS2Q5JR59 1369 aa7.46□□□□□ -1.22
MACF1-210ENST00000462496 DIEXFQ68CQ4 756 aaKnown RBP7.45□□□□□ -1.22
MACF1-210ENST00000462496 ATP1B4Q9UN42 357 aaPredicted RBP7.45□□□□□ -1.22
MACF1-210ENST00000462496 MAGI3Q5TCQ9 1506 aa7.45□□□□□ -1.22
MACF1-210ENST00000462496 MYOM3Q5VTT5 1437 aa7.44□□□□□ -1.22
MACF1-210ENST00000462496 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
MACF1-210ENST00000462496 TCOF1Q13428 1488 aaKnown RBP7.44□□□□□ -1.22
MACF1-210ENST00000462496 MAPKBP1O60336 1514 aa7.44□□□□□ -1.22
MACF1-210ENST00000462496 EPRSP07814 1512 aaKnown RBP7.44□□□□□ -1.22
MACF1-210ENST00000462496 DISP1Q96F81 1524 aa7.44□□□□□ -1.22
MACF1-210ENST00000462496 FBLN2P98095 1184 aa7.43□□□□□ -1.22
MACF1-210ENST00000462496 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
MACF1-210ENST00000462496 PTPN23Q9H3S7 1636 aa7.42□□□□□ -1.22
MACF1-210ENST00000462496 ITGAEP38570 1179 aa7.42□□□□□ -1.22
MACF1-210ENST00000462496 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms