RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
TNRC6A-204ENST00000462400 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
TNRC6A-204ENST00000462400 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
TNRC6A-204ENST00000462400 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
TNRC6A-204ENST00000462400 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
TNRC6A-204ENST00000462400 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
TNRC6A-204ENST00000462400 MYT1Q01538 1121 aa18.22■□□□□ 0.51
TNRC6A-204ENST00000462400 APLP2Q06481 763 aa18.19■□□□□ 0.5
TNRC6A-204ENST00000462400 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
TNRC6A-204ENST00000462400 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
TNRC6A-204ENST00000462400 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
TNRC6A-204ENST00000462400 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
TNRC6A-204ENST00000462400 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
TNRC6A-204ENST00000462400 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
TNRC6A-204ENST00000462400 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
TNRC6A-204ENST00000462400 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
TNRC6A-204ENST00000462400 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
TNRC6A-204ENST00000462400 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
TNRC6A-204ENST00000462400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
TNRC6A-204ENST00000462400 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.49
TNRC6A-204ENST00000462400 FBLN2P98095 1184 aa18.07■□□□□ 0.48
TNRC6A-204ENST00000462400 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
TNRC6A-204ENST00000462400 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
TNRC6A-204ENST00000462400 PCF11O94913 1555 aaKnown RBP18.02■□□□□ 0.47
TNRC6A-204ENST00000462400 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
TNRC6A-204ENST00000462400 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
TNRC6A-204ENST00000462400 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
TNRC6A-204ENST00000462400 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
TNRC6A-204ENST00000462400 SAMD9Q5K651 1589 aa17.97■□□□□ 0.47
TNRC6A-204ENST00000462400 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
TNRC6A-204ENST00000462400 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
TNRC6A-204ENST00000462400 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
TNRC6A-204ENST00000462400 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
TNRC6A-204ENST00000462400 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
TNRC6A-204ENST00000462400 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
TNRC6A-204ENST00000462400 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.46
TNRC6A-204ENST00000462400 ARID3CA6NKF2 412 aa17.88■□□□□ 0.45
TNRC6A-204ENST00000462400 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
TNRC6A-204ENST00000462400 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
TNRC6A-204ENST00000462400 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
TNRC6A-204ENST00000462400 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
TNRC6A-204ENST00000462400 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
TNRC6A-204ENST00000462400 UGGT2Q9NYU1 1516 aa17.84■□□□□ 0.45
TNRC6A-204ENST00000462400 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
TNRC6A-204ENST00000462400 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
TNRC6A-204ENST00000462400 ITGAEP38570 1179 aa17.81■□□□□ 0.44
TNRC6A-204ENST00000462400 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
TNRC6A-204ENST00000462400 NUP160Q12769 1436 aa17.8■□□□□ 0.44
TNRC6A-204ENST00000462400 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
TNRC6A-204ENST00000462400 CHD1O14646 1710 aa17.79■□□□□ 0.44
TNRC6A-204ENST00000462400 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
TNRC6A-204ENST00000462400 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
TNRC6A-204ENST00000462400 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
TNRC6A-204ENST00000462400 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
TNRC6A-204ENST00000462400 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
TNRC6A-204ENST00000462400 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
TNRC6A-204ENST00000462400 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
TNRC6A-204ENST00000462400 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
TNRC6A-204ENST00000462400 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
TNRC6A-204ENST00000462400 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
TNRC6A-204ENST00000462400 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
TNRC6A-204ENST00000462400 PLB1Q6P1J6 1458 aa17.67■□□□□ 0.42
TNRC6A-204ENST00000462400 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
TNRC6A-204ENST00000462400 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
TNRC6A-204ENST00000462400 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
TNRC6A-204ENST00000462400 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
TNRC6A-204ENST00000462400 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
TNRC6A-204ENST00000462400 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
TNRC6A-204ENST00000462400 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
TNRC6A-204ENST00000462400 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
TNRC6A-204ENST00000462400 ERCC6L2Q5T890 1561 aa17.59■□□□□ 0.41
TNRC6A-204ENST00000462400 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
TNRC6A-204ENST00000462400 MIER1Q8N108 512 aa17.58■□□□□ 0.4
TNRC6A-204ENST00000462400 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
TNRC6A-204ENST00000462400 PTPRGP23470 1445 aa17.53■□□□□ 0.4
TNRC6A-204ENST00000462400 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
TNRC6A-204ENST00000462400 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
TNRC6A-204ENST00000462400 ABCA8O94911 1581 aa17.51■□□□□ 0.39
TNRC6A-204ENST00000462400 RAB3GAP2Q9H2M9 1393 aa17.49■□□□□ 0.39
TNRC6A-204ENST00000462400 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
TNRC6A-204ENST00000462400 PTPN23Q9H3S7 1636 aa17.48■□□□□ 0.39
TNRC6A-204ENST00000462400 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
TNRC6A-204ENST00000462400 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
TNRC6A-204ENST00000462400 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
TNRC6A-204ENST00000462400 ATP10BO94823 1461 aa17.46■□□□□ 0.39
TNRC6A-204ENST00000462400 KIF14Q15058 1648 aa17.46■□□□□ 0.38
TNRC6A-204ENST00000462400 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
TNRC6A-204ENST00000462400 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
TNRC6A-204ENST00000462400 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
TNRC6A-204ENST00000462400 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
TNRC6A-204ENST00000462400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.42■□□□□ 0.38
TNRC6A-204ENST00000462400 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
TNRC6A-204ENST00000462400 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
TNRC6A-204ENST00000462400 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
TNRC6A-204ENST00000462400 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
TNRC6A-204ENST00000462400 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
TNRC6A-204ENST00000462400 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
TNRC6A-204ENST00000462400 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
TNRC6A-204ENST00000462400 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
TNRC6A-204ENST00000462400 ADCY10Q96PN6 1610 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms