RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
TNRC6A-204ENST00000462400 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
TNRC6A-204ENST00000462400 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
TNRC6A-204ENST00000462400 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
TNRC6A-204ENST00000462400 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
TNRC6A-204ENST00000462400 ABCC9O60706 1549 aa21.64■■□□□ 1.05
TNRC6A-204ENST00000462400 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
TNRC6A-204ENST00000462400 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
TNRC6A-204ENST00000462400 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
TNRC6A-204ENST00000462400 NACADO15069 1562 aa21.1■□□□□ 0.97
TNRC6A-204ENST00000462400 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
TNRC6A-204ENST00000462400 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
TNRC6A-204ENST00000462400 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
TNRC6A-204ENST00000462400 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
TNRC6A-204ENST00000462400 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
TNRC6A-204ENST00000462400 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
TNRC6A-204ENST00000462400 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
TNRC6A-204ENST00000462400 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
TNRC6A-204ENST00000462400 WIZO95785 1651 aa20.23■□□□□ 0.83
TNRC6A-204ENST00000462400 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
TNRC6A-204ENST00000462400 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
TNRC6A-204ENST00000462400 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
TNRC6A-204ENST00000462400 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
TNRC6A-204ENST00000462400 HRCP23327 699 aa19.83■□□□□ 0.77
TNRC6A-204ENST00000462400 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
TNRC6A-204ENST00000462400 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
TNRC6A-204ENST00000462400 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
TNRC6A-204ENST00000462400 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
TNRC6A-204ENST00000462400 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
TNRC6A-204ENST00000462400 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
TNRC6A-204ENST00000462400 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
TNRC6A-204ENST00000462400 NCAPD3P42695 1498 aa19.52■□□□□ 0.71
TNRC6A-204ENST00000462400 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
TNRC6A-204ENST00000462400 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
TNRC6A-204ENST00000462400 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
TNRC6A-204ENST00000462400 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
TNRC6A-204ENST00000462400 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
TNRC6A-204ENST00000462400 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
TNRC6A-204ENST00000462400 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
TNRC6A-204ENST00000462400 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
TNRC6A-204ENST00000462400 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
TNRC6A-204ENST00000462400 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
TNRC6A-204ENST00000462400 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
TNRC6A-204ENST00000462400 CFTRP13569 1480 aa19.16■□□□□ 0.66
TNRC6A-204ENST00000462400 SOGA1O94964 1423 aa19.15■□□□□ 0.66
TNRC6A-204ENST00000462400 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
TNRC6A-204ENST00000462400 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
TNRC6A-204ENST00000462400 NESP48681 1621 aa19.05■□□□□ 0.64
TNRC6A-204ENST00000462400 CUX1P39880 1505 aa19.01■□□□□ 0.63
TNRC6A-204ENST00000462400 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
TNRC6A-204ENST00000462400 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
TNRC6A-204ENST00000462400 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
TNRC6A-204ENST00000462400 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
TNRC6A-204ENST00000462400 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
TNRC6A-204ENST00000462400 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
TNRC6A-204ENST00000462400 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
TNRC6A-204ENST00000462400 EEA1Q15075 1411 aa18.87■□□□□ 0.61
TNRC6A-204ENST00000462400 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
TNRC6A-204ENST00000462400 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
TNRC6A-204ENST00000462400 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
TNRC6A-204ENST00000462400 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
TNRC6A-204ENST00000462400 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
TNRC6A-204ENST00000462400 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
TNRC6A-204ENST00000462400 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
TNRC6A-204ENST00000462400 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
TNRC6A-204ENST00000462400 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
TNRC6A-204ENST00000462400 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
TNRC6A-204ENST00000462400 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
TNRC6A-204ENST00000462400 CUX2O14529 1486 aa18.7■□□□□ 0.58
TNRC6A-204ENST00000462400 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
TNRC6A-204ENST00000462400 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
TNRC6A-204ENST00000462400 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
TNRC6A-204ENST00000462400 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
TNRC6A-204ENST00000462400 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
TNRC6A-204ENST00000462400 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
TNRC6A-204ENST00000462400 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
TNRC6A-204ENST00000462400 KIF21BO75037 1637 aa18.69■□□□□ 0.58
TNRC6A-204ENST00000462400 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
TNRC6A-204ENST00000462400 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
TNRC6A-204ENST00000462400 PRXQ9BXM0 1461 aa18.6■□□□□ 0.57
TNRC6A-204ENST00000462400 IGF1RP08069 1367 aa18.57■□□□□ 0.56
TNRC6A-204ENST00000462400 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
TNRC6A-204ENST00000462400 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.56
TNRC6A-204ENST00000462400 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
TNRC6A-204ENST00000462400 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
TNRC6A-204ENST00000462400 CLIP1P30622 1438 aa18.5■□□□□ 0.55
TNRC6A-204ENST00000462400 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
TNRC6A-204ENST00000462400 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
TNRC6A-204ENST00000462400 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
TNRC6A-204ENST00000462400 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
TNRC6A-204ENST00000462400 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
TNRC6A-204ENST00000462400 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
TNRC6A-204ENST00000462400 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
TNRC6A-204ENST00000462400 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.533e-7■■■■□ 21.2
TNRC6A-204ENST00000462400 WDR62O43379 1518 aa18.36■□□□□ 0.53
TNRC6A-204ENST00000462400 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
TNRC6A-204ENST00000462400 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
TNRC6A-204ENST00000462400 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
TNRC6A-204ENST00000462400 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
TNRC6A-204ENST00000462400 CUL7Q14999 1698 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms