RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
HERC4-207ENST00000460168 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
HERC4-207ENST00000460168 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
HERC4-207ENST00000460168 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
HERC4-207ENST00000460168 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
HERC4-207ENST00000460168 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
HERC4-207ENST00000460168 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
HERC4-207ENST00000460168 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
HERC4-207ENST00000460168 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
HERC4-207ENST00000460168 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
HERC4-207ENST00000460168 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
HERC4-207ENST00000460168 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
HERC4-207ENST00000460168 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
HERC4-207ENST00000460168 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
HERC4-207ENST00000460168 SYNJ2O15056 1496 aa15.96■□□□□ 0.15
HERC4-207ENST00000460168 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
HERC4-207ENST00000460168 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
HERC4-207ENST00000460168 FBLN2P98095 1184 aa15.95■□□□□ 0.14
HERC4-207ENST00000460168 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
HERC4-207ENST00000460168 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
HERC4-207ENST00000460168 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
HERC4-207ENST00000460168 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
HERC4-207ENST00000460168 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
HERC4-207ENST00000460168 HRCP23327 699 aa15.86■□□□□ 0.13
HERC4-207ENST00000460168 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
HERC4-207ENST00000460168 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
HERC4-207ENST00000460168 UGGT2Q9NYU1 1516 aa15.82■□□□□ 0.12
HERC4-207ENST00000460168 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
HERC4-207ENST00000460168 NUP160Q12769 1436 aa15.82■□□□□ 0.12
HERC4-207ENST00000460168 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
HERC4-207ENST00000460168 CHD1O14646 1710 aa15.79■□□□□ 0.12
HERC4-207ENST00000460168 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
HERC4-207ENST00000460168 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
HERC4-207ENST00000460168 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
HERC4-207ENST00000460168 TIAM1Q13009 1591 aa15.76■□□□□ 0.11
HERC4-207ENST00000460168 KIAA0556O60303 1618 aa15.75■□□□□ 0.11
HERC4-207ENST00000460168 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
HERC4-207ENST00000460168 DISP1Q96F81 1524 aa15.75■□□□□ 0.11
HERC4-207ENST00000460168 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
HERC4-207ENST00000460168 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
HERC4-207ENST00000460168 CFAP43Q8NDM7 1665 aa15.72■□□□□ 0.11
HERC4-207ENST00000460168 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
HERC4-207ENST00000460168 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
HERC4-207ENST00000460168 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
HERC4-207ENST00000460168 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
HERC4-207ENST00000460168 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
HERC4-207ENST00000460168 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
HERC4-207ENST00000460168 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
HERC4-207ENST00000460168 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
HERC4-207ENST00000460168 EPRSP07814 1512 aaKnown RBP15.6■□□□□ 0.09
HERC4-207ENST00000460168 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
HERC4-207ENST00000460168 SHROOM2Q13796 1616 aa15.6■□□□□ 0.09
HERC4-207ENST00000460168 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
HERC4-207ENST00000460168 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
HERC4-207ENST00000460168 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
HERC4-207ENST00000460168 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
HERC4-207ENST00000460168 NUP153P49790 1475 aaKnown RBP15.56■□□□□ 0.08
HERC4-207ENST00000460168 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
HERC4-207ENST00000460168 EHBP1L1Q8N3D4 1523 aa15.56■□□□□ 0.08
HERC4-207ENST00000460168 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
HERC4-207ENST00000460168 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
HERC4-207ENST00000460168 CCNB3Q8WWL7 1395 aa15.54■□□□□ 0.08
HERC4-207ENST00000460168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
HERC4-207ENST00000460168 PTPRGP23470 1445 aa15.54■□□□□ 0.08
HERC4-207ENST00000460168 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.07
HERC4-207ENST00000460168 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.07
HERC4-207ENST00000460168 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.07
HERC4-207ENST00000460168 ABCA8O94911 1581 aa15.51■□□□□ 0.07
HERC4-207ENST00000460168 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
HERC4-207ENST00000460168 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
HERC4-207ENST00000460168 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
HERC4-207ENST00000460168 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
HERC4-207ENST00000460168 FAM50AQ14320 339 aaKnown RBP15.46■□□□□ 0.07
HERC4-207ENST00000460168 ITGAEP38570 1179 aa15.44■□□□□ 0.06
HERC4-207ENST00000460168 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
HERC4-207ENST00000460168 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
HERC4-207ENST00000460168 UACAQ9BZF9 1416 aa15.44■□□□□ 0.06
HERC4-207ENST00000460168 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
HERC4-207ENST00000460168 ATP10BO94823 1461 aa15.42■□□□□ 0.06
HERC4-207ENST00000460168 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
HERC4-207ENST00000460168 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
HERC4-207ENST00000460168 ABCC2Q92887 1545 aa15.39■□□□□ 0.05
HERC4-207ENST00000460168 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
HERC4-207ENST00000460168 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
HERC4-207ENST00000460168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.38■□□□□ 0.05
HERC4-207ENST00000460168 PTPN23Q9H3S7 1636 aa15.36■□□□□ 0.05
HERC4-207ENST00000460168 KIF14Q15058 1648 aa15.35■□□□□ 0.05
HERC4-207ENST00000460168 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
HERC4-207ENST00000460168 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
HERC4-207ENST00000460168 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
HERC4-207ENST00000460168 UHRF1BP1LA0JNW5 1464 aa15.33■□□□□ 0.04
HERC4-207ENST00000460168 ITSN2Q9NZM3 1697 aa15.31■□□□□ 0.04
HERC4-207ENST00000460168 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
HERC4-207ENST00000460168 ZCCHC11Q5TAX3 1644 aaKnown RBP15.29■□□□□ 0.04
HERC4-207ENST00000460168 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
HERC4-207ENST00000460168 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
HERC4-207ENST00000460168 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
HERC4-207ENST00000460168 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
HERC4-207ENST00000460168 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
HERC4-207ENST00000460168 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms