RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
U2AF1-204ENST00000459639 GRIN2AQ12879 1464 aa38.52■■■■□ 3.76
U2AF1-204ENST00000459639 VPS8Q8N3P4 1428 aa38.52■■■■□ 3.76
U2AF1-204ENST00000459639 EFCAB5A4FU69 1503 aa38.48■■■■□ 3.75
U2AF1-204ENST00000459639 IQGAP2Q13576 1575 aa38.41■■■■□ 3.74
U2AF1-204ENST00000459639 SAMD9Q5K651 1589 aa38.35■■■■□ 3.73
U2AF1-204ENST00000459639 CHMP7Q8WUX9 453 aaPredicted RBP38.35■■■■□ 3.73
U2AF1-204ENST00000459639 KIAA0586Q9BVV6 1533 aa38.31■■■■□ 3.72
U2AF1-204ENST00000459639 CEP170Q5SW79 1584 aa38.3■■■■□ 3.72
U2AF1-204ENST00000459639 NUP160Q12769 1436 aa38.26■■■■□ 3.72
U2AF1-204ENST00000459639 CHD1O14646 1710 aa38.24■■■■□ 3.71
U2AF1-204ENST00000459639 UGGT2Q9NYU1 1516 aa38.22■■■■□ 3.71
U2AF1-204ENST00000459639 FBLN2P98095 1184 aa38.2■■■■□ 3.71
U2AF1-204ENST00000459639 FHOD3Q2V2M9 1422 aa38.17■■■■□ 3.7
U2AF1-204ENST00000459639 P3H3Q8IVL6 736 aa38.08■■■■□ 3.69
U2AF1-204ENST00000459639 FMN1Q68DA7 1419 aa38.06■■■■□ 3.68
U2AF1-204ENST00000459639 PCF11O94913 1555 aaKnown RBP38.05■■■■□ 3.68
U2AF1-204ENST00000459639 APLP2Q06481 763 aa38.04■■■■□ 3.68
U2AF1-204ENST00000459639 TRIM26Q12899 539 aaPredicted RBP38.03■■■■□ 3.68
U2AF1-204ENST00000459639 KIAA0556O60303 1618 aa38.03■■■■□ 3.68
U2AF1-204ENST00000459639 PPARGC1BQ86YN6 1023 aaKnown RBP38■■■■□ 3.67
U2AF1-204ENST00000459639 FYCO1Q9BQS8 1478 aa37.99■■■■□ 3.67
U2AF1-204ENST00000459639 DISP1Q96F81 1524 aa37.99■■■■□ 3.67
U2AF1-204ENST00000459639 CASKIN1Q8WXD9 1431 aa37.96■■■■□ 3.67
U2AF1-204ENST00000459639 MAP3K1Q13233 1512 aa37.95■■■■□ 3.67
U2AF1-204ENST00000459639 CFAP43Q8NDM7 1665 aa37.89■■■■□ 3.66
U2AF1-204ENST00000459639 TIAM1Q13009 1591 aa37.89■■■■□ 3.66
U2AF1-204ENST00000459639 PCGF6Q9BYE7 350 aa37.88■■■■□ 3.65
U2AF1-204ENST00000459639 JPH4Q96JJ6 628 aa37.85■■■■□ 3.65
U2AF1-204ENST00000459639 CARMIL2Q6F5E8 1435 aa37.83■■■■□ 3.65
U2AF1-204ENST00000459639 SHROOM2Q13796 1616 aa37.82■■■■□ 3.65
U2AF1-204ENST00000459639 CLASP1Q7Z460 1538 aa37.78■■■■□ 3.64
U2AF1-204ENST00000459639 HECW1Q76N89 1606 aa37.75■■■■□ 3.63
U2AF1-204ENST00000459639 TTBK1Q5TCY1 1321 aaPredicted RBP37.74■■■■□ 3.63
U2AF1-204ENST00000459639 LRRIQ1Q96JM4 1722 aa37.74■■■■□ 3.63
U2AF1-204ENST00000459639 KANK4Q5T7N3 995 aaPredicted RBP37.68■■■■□ 3.62
U2AF1-204ENST00000459639 PRG4Q92954 1404 aaPredicted RBP37.67■■■■□ 3.62
U2AF1-204ENST00000459639 LRRC9Q6ZRR7 1453 aa37.66■■■■□ 3.62
U2AF1-204ENST00000459639 ATP1B4Q9UN42 357 aaPredicted RBP37.65■■■■□ 3.62
U2AF1-204ENST00000459639 CCDC18Q5T9S5 1454 aa37.64■■■■□ 3.62
U2AF1-204ENST00000459639 RAPGEF6Q8TEU7 1601 aa37.64■■■■□ 3.62
U2AF1-204ENST00000459639 EPRSP07814 1512 aaKnown RBP37.54■■■■□ 3.6
U2AF1-204ENST00000459639 NUP153P49790 1475 aaKnown RBP37.49■■■■□ 3.59
U2AF1-204ENST00000459639 ABCA8O94911 1581 aa37.48■■■■□ 3.59
U2AF1-204ENST00000459639 PLB1Q6P1J6 1458 aa37.46■■■■□ 3.59
U2AF1-204ENST00000459639 ERCC6L2Q5T890 1561 aa37.45■■■■□ 3.59
U2AF1-204ENST00000459639 EHBP1L1Q8N3D4 1523 aa37.45■■■■□ 3.59
U2AF1-204ENST00000459639 CDK13Q14004 1512 aaKnown RBP37.43■■■■□ 3.58
U2AF1-204ENST00000459639 PTPRGP23470 1445 aa37.41■■■■□ 3.58
U2AF1-204ENST00000459639 MTUS2Q5JR59 1369 aa37.39■■■■□ 3.58
U2AF1-204ENST00000459639 MAGI3Q5TCQ9 1506 aa37.35■■■■□ 3.57
U2AF1-204ENST00000459639 SUPT6HQ7KZ85 1726 aaKnown RBP37.35■■■■□ 3.57
U2AF1-204ENST00000459639 OSCARQ8IYS5 282 aa37.34■■■■□ 3.57
U2AF1-204ENST00000459639 RRBP1Q9P2E9 1410 aaKnown RBP37.34■■■■□ 3.57
U2AF1-204ENST00000459639 PHLDB1Q86UU1 1377 aa37.25■■■■□ 3.55
U2AF1-204ENST00000459639 UACAQ9BZF9 1416 aa37.23■■■■□ 3.55
U2AF1-204ENST00000459639 ARHGEF11O15085 1522 aa37.22■■■■□ 3.55
U2AF1-204ENST00000459639 NCOA2Q15596 1464 aa37.22■■■■□ 3.55
U2AF1-204ENST00000459639 ARID3CA6NKF2 412 aa37.2■■■■□ 3.55
U2AF1-204ENST00000459639 CCNB3Q8WWL7 1395 aa37.2■■■■□ 3.55
U2AF1-204ENST00000459639 ABCC2Q92887 1545 aa37.19■■■■□ 3.54
U2AF1-204ENST00000459639 CDK11AQ9UQ88 783 aaPredicted RBP37.17■■■■□ 3.54
U2AF1-204ENST00000459639 ATP10BO94823 1461 aa37.16■■■■□ 3.54
U2AF1-204ENST00000459639 TROQ12816 1431 aaPredicted RBP37.11■■■■□ 3.53
U2AF1-204ENST00000459639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.11■■■■□ 3.53
U2AF1-204ENST00000459639 HNRNPUL2Q1KMD3 747 aaKnown RBP37.11■■■■□ 3.53
U2AF1-204ENST00000459639 ADCY10Q96PN6 1610 aa37.11■■■■□ 3.53
U2AF1-204ENST00000459639 UHRF1BP1LA0JNW5 1464 aa37.1■■■■□ 3.53
U2AF1-204ENST00000459639 MYOM3Q5VTT5 1437 aa37.08■■■■□ 3.53
U2AF1-204ENST00000459639 FGD6Q6ZV73 1430 aa37.05■■■■□ 3.52
U2AF1-204ENST00000459639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.01■■■■□ 3.52
U2AF1-204ENST00000459639 KIF14Q15058 1648 aa36.95■■■■□ 3.51
U2AF1-204ENST00000459639 ZCCHC11Q5TAX3 1644 aaKnown RBP36.95■■■■□ 3.5
U2AF1-204ENST00000459639 KDM5BQ9UGL1 1544 aa36.94■■■■□ 3.5
U2AF1-204ENST00000459639 PLEKHD1A6NEE1 506 aa36.93■■■■□ 3.5
U2AF1-204ENST00000459639 PTPN23Q9H3S7 1636 aa36.92■■■■□ 3.5
U2AF1-204ENST00000459639 ITSN2Q9NZM3 1697 aa36.9■■■■□ 3.5
U2AF1-204ENST00000459639 MIA2Q96PC5 1412 aa36.9■■■■□ 3.5
U2AF1-204ENST00000459639 TCOF1Q13428 1488 aaKnown RBP36.87■■■■□ 3.49
U2AF1-204ENST00000459639 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
U2AF1-204ENST00000459639 ABCC10Q5T3U5 1492 aa36.81■■■■□ 3.48
U2AF1-204ENST00000459639 CDC42BPAQ5VT25 1732 aa36.77■■■■□ 3.48
U2AF1-204ENST00000459639 GPATCH8Q9UKJ3 1502 aaKnown RBP36.75■■■■□ 3.47
U2AF1-204ENST00000459639 HRCP23327 699 aa36.7■■■■□ 3.47
U2AF1-204ENST00000459639 ITGAEP38570 1179 aa36.7■■■■□ 3.47
U2AF1-204ENST00000459639 RIMBP3CA6NJZ7 1639 aa36.67■■■■□ 3.46
U2AF1-204ENST00000459639 RIMBP3BA6NNM3 1639 aa36.67■■■■□ 3.46
U2AF1-204ENST00000459639 RIMBP3Q9UFD9 1639 aa36.67■■■■□ 3.46
U2AF1-204ENST00000459639 PREX2Q70Z35 1606 aa36.64■■■■□ 3.46
U2AF1-204ENST00000459639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.63■■■■□ 3.45
U2AF1-204ENST00000459639 TTC37Q6PGP7 1564 aa36.63■■■■□ 3.45
U2AF1-204ENST00000459639 CAMSAP2Q08AD1 1489 aa36.6■■■■□ 3.45
U2AF1-204ENST00000459639 CFDP1Q9UEE9 299 aaPredicted RBP36.59■■■■□ 3.45
U2AF1-204ENST00000459639 WDR7Q9Y4E6 1490 aa36.58■■■■□ 3.45
U2AF1-204ENST00000459639 MYO5CQ9NQX4 1742 aa36.58■■■■□ 3.45
U2AF1-204ENST00000459639 DNMT1P26358 1616 aaKnown RBP36.58■■■■□ 3.45
U2AF1-204ENST00000459639 CDC42BPBQ9Y5S2 1711 aa36.58■■■■□ 3.45
U2AF1-204ENST00000459639 PTPRKQ15262 1439 aa36.55■■■■□ 3.44
U2AF1-204ENST00000459639 SETD5Q9C0A6 1442 aa36.51■■■■□ 3.44
U2AF1-204ENST00000459639 CCER1Q8TC90 406 aaPredicted RBP36.51■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms