RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 ARHGAP35Q9NRY4 1499 aa17.78■□□□□ 0.44
NDUFA3-209ENST00000451517 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
NDUFA3-209ENST00000451517 RANGAP1P46060 587 aaPredicted RBP17.76■□□□□ 0.43
NDUFA3-209ENST00000451517 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
NDUFA3-209ENST00000451517 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
NDUFA3-209ENST00000451517 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
NDUFA3-209ENST00000451517 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
NDUFA3-209ENST00000451517 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
NDUFA3-209ENST00000451517 NUP160Q12769 1436 aa17.69■□□□□ 0.42
NDUFA3-209ENST00000451517 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
NDUFA3-209ENST00000451517 CEP170Q5SW79 1584 aa17.67■□□□□ 0.42
NDUFA3-209ENST00000451517 FBLN2P98095 1184 aa17.65■□□□□ 0.42
NDUFA3-209ENST00000451517 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
NDUFA3-209ENST00000451517 FHOD3Q2V2M9 1422 aa17.62■□□□□ 0.41
NDUFA3-209ENST00000451517 CHD1O14646 1710 aa17.6■□□□□ 0.41
NDUFA3-209ENST00000451517 P3H3Q8IVL6 736 aa17.58■□□□□ 0.4
NDUFA3-209ENST00000451517 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
NDUFA3-209ENST00000451517 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
NDUFA3-209ENST00000451517 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
NDUFA3-209ENST00000451517 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
NDUFA3-209ENST00000451517 PCF11O94913 1555 aaKnown RBP17.51■□□□□ 0.39
NDUFA3-209ENST00000451517 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
NDUFA3-209ENST00000451517 APLP2Q06481 763 aa17.5■□□□□ 0.39
NDUFA3-209ENST00000451517 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
NDUFA3-209ENST00000451517 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
NDUFA3-209ENST00000451517 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
NDUFA3-209ENST00000451517 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
NDUFA3-209ENST00000451517 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
NDUFA3-209ENST00000451517 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
NDUFA3-209ENST00000451517 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
NDUFA3-209ENST00000451517 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
NDUFA3-209ENST00000451517 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
NDUFA3-209ENST00000451517 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
NDUFA3-209ENST00000451517 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
NDUFA3-209ENST00000451517 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
NDUFA3-209ENST00000451517 HECW1Q76N89 1606 aa17.37■□□□□ 0.37
NDUFA3-209ENST00000451517 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
NDUFA3-209ENST00000451517 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
NDUFA3-209ENST00000451517 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
NDUFA3-209ENST00000451517 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
NDUFA3-209ENST00000451517 LRRIQ1Q96JM4 1722 aa17.34■□□□□ 0.37
NDUFA3-209ENST00000451517 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.37
NDUFA3-209ENST00000451517 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
NDUFA3-209ENST00000451517 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
NDUFA3-209ENST00000451517 ABCA8O94911 1581 aa17.3■□□□□ 0.36
NDUFA3-209ENST00000451517 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
NDUFA3-209ENST00000451517 PTPRGP23470 1445 aa17.3■□□□□ 0.36
NDUFA3-209ENST00000451517 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
NDUFA3-209ENST00000451517 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
NDUFA3-209ENST00000451517 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
NDUFA3-209ENST00000451517 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
NDUFA3-209ENST00000451517 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
NDUFA3-209ENST00000451517 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
NDUFA3-209ENST00000451517 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
NDUFA3-209ENST00000451517 UACAQ9BZF9 1416 aa17.21■□□□□ 0.34
NDUFA3-209ENST00000451517 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
NDUFA3-209ENST00000451517 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
NDUFA3-209ENST00000451517 ATP10BO94823 1461 aa17.17■□□□□ 0.34
NDUFA3-209ENST00000451517 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
NDUFA3-209ENST00000451517 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
NDUFA3-209ENST00000451517 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
NDUFA3-209ENST00000451517 UHRF1BP1LA0JNW5 1464 aa17.16■□□□□ 0.34
NDUFA3-209ENST00000451517 NCOA2Q15596 1464 aa17.16■□□□□ 0.34
NDUFA3-209ENST00000451517 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
NDUFA3-209ENST00000451517 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
NDUFA3-209ENST00000451517 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
NDUFA3-209ENST00000451517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
NDUFA3-209ENST00000451517 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
NDUFA3-209ENST00000451517 MYOM3Q5VTT5 1437 aa17.09■□□□□ 0.33
NDUFA3-209ENST00000451517 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
NDUFA3-209ENST00000451517 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
NDUFA3-209ENST00000451517 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
NDUFA3-209ENST00000451517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■■□ 19.8
NDUFA3-209ENST00000451517 PLEKHD1A6NEE1 506 aa17.05■□□□□ 0.32
NDUFA3-209ENST00000451517 KIF14Q15058 1648 aa17.03■□□□□ 0.32
NDUFA3-209ENST00000451517 ZCCHC11Q5TAX3 1644 aaKnown RBP17.02■□□□□ 0.31
NDUFA3-209ENST00000451517 MIA2Q96PC5 1412 aa17.02■□□□□ 0.31
NDUFA3-209ENST00000451517 TCOF1Q13428 1488 aaKnown RBP17■□□□□ 0.31
NDUFA3-209ENST00000451517 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
NDUFA3-209ENST00000451517 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
NDUFA3-209ENST00000451517 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
NDUFA3-209ENST00000451517 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
NDUFA3-209ENST00000451517 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
NDUFA3-209ENST00000451517 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
NDUFA3-209ENST00000451517 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
NDUFA3-209ENST00000451517 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
NDUFA3-209ENST00000451517 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
NDUFA3-209ENST00000451517 ITGAEP38570 1179 aa16.9■□□□□ 0.3
NDUFA3-209ENST00000451517 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
NDUFA3-209ENST00000451517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
NDUFA3-209ENST00000451517 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
NDUFA3-209ENST00000451517 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
NDUFA3-209ENST00000451517 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
NDUFA3-209ENST00000451517 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
NDUFA3-209ENST00000451517 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
NDUFA3-209ENST00000451517 HRCP23327 699 aa16.86■□□□□ 0.29
NDUFA3-209ENST00000451517 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
NDUFA3-209ENST00000451517 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
NDUFA3-209ENST00000451517 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
NDUFA3-209ENST00000451517 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms