RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
NDUFA3-209ENST00000451517 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
NDUFA3-209ENST00000451517 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
NDUFA3-209ENST00000451517 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
NDUFA3-209ENST00000451517 ABCC9O60706 1549 aa21.4■■□□□ 1.02
NDUFA3-209ENST00000451517 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
NDUFA3-209ENST00000451517 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
NDUFA3-209ENST00000451517 NACADO15069 1562 aa21.07■□□□□ 0.96
NDUFA3-209ENST00000451517 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
NDUFA3-209ENST00000451517 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
NDUFA3-209ENST00000451517 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
NDUFA3-209ENST00000451517 UNC13AQ9UPW8 1703 aa20.42■□□□□ 0.86
NDUFA3-209ENST00000451517 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
NDUFA3-209ENST00000451517 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
NDUFA3-209ENST00000451517 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
NDUFA3-209ENST00000451517 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
NDUFA3-209ENST00000451517 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
NDUFA3-209ENST00000451517 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
NDUFA3-209ENST00000451517 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
NDUFA3-209ENST00000451517 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
NDUFA3-209ENST00000451517 WIZO95785 1651 aa19.74■□□□□ 0.75
NDUFA3-209ENST00000451517 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
NDUFA3-209ENST00000451517 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
NDUFA3-209ENST00000451517 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
NDUFA3-209ENST00000451517 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
NDUFA3-209ENST00000451517 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
NDUFA3-209ENST00000451517 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
NDUFA3-209ENST00000451517 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
NDUFA3-209ENST00000451517 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
NDUFA3-209ENST00000451517 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
NDUFA3-209ENST00000451517 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
NDUFA3-209ENST00000451517 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
NDUFA3-209ENST00000451517 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
NDUFA3-209ENST00000451517 CFTRP13569 1480 aa18.98■□□□□ 0.63
NDUFA3-209ENST00000451517 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
NDUFA3-209ENST00000451517 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
NDUFA3-209ENST00000451517 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
NDUFA3-209ENST00000451517 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
NDUFA3-209ENST00000451517 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
NDUFA3-209ENST00000451517 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
NDUFA3-209ENST00000451517 NESP48681 1621 aa18.75■□□□□ 0.59
NDUFA3-209ENST00000451517 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
NDUFA3-209ENST00000451517 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
NDUFA3-209ENST00000451517 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
NDUFA3-209ENST00000451517 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
NDUFA3-209ENST00000451517 CUX1P39880 1505 aa18.65■□□□□ 0.58
NDUFA3-209ENST00000451517 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
NDUFA3-209ENST00000451517 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
NDUFA3-209ENST00000451517 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
NDUFA3-209ENST00000451517 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
NDUFA3-209ENST00000451517 SOGA1O94964 1423 aa18.52■□□□□ 0.56
NDUFA3-209ENST00000451517 EEA1Q15075 1411 aa18.51■□□□□ 0.55
NDUFA3-209ENST00000451517 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
NDUFA3-209ENST00000451517 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
NDUFA3-209ENST00000451517 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
NDUFA3-209ENST00000451517 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
NDUFA3-209ENST00000451517 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
NDUFA3-209ENST00000451517 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
NDUFA3-209ENST00000451517 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
NDUFA3-209ENST00000451517 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
NDUFA3-209ENST00000451517 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
NDUFA3-209ENST00000451517 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
NDUFA3-209ENST00000451517 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
NDUFA3-209ENST00000451517 WDR62O43379 1518 aa18.34■□□□□ 0.53
NDUFA3-209ENST00000451517 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
NDUFA3-209ENST00000451517 CUX2O14529 1486 aa18.31■□□□□ 0.52
NDUFA3-209ENST00000451517 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
NDUFA3-209ENST00000451517 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-209ENST00000451517 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
NDUFA3-209ENST00000451517 KIF21BO75037 1637 aa18.26■□□□□ 0.51
NDUFA3-209ENST00000451517 TARBP1Q13395 1621 aaKnown RBP18.23■□□□□ 0.51
NDUFA3-209ENST00000451517 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
NDUFA3-209ENST00000451517 PRXQ9BXM0 1461 aa18.21■□□□□ 0.51
NDUFA3-209ENST00000451517 IGF1RP08069 1367 aa18.19■□□□□ 0.5
NDUFA3-209ENST00000451517 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
NDUFA3-209ENST00000451517 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
NDUFA3-209ENST00000451517 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
NDUFA3-209ENST00000451517 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
NDUFA3-209ENST00000451517 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
NDUFA3-209ENST00000451517 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
NDUFA3-209ENST00000451517 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
NDUFA3-209ENST00000451517 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
NDUFA3-209ENST00000451517 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
NDUFA3-209ENST00000451517 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
NDUFA3-209ENST00000451517 CUL7Q14999 1698 aa18.07■□□□□ 0.48
NDUFA3-209ENST00000451517 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
NDUFA3-209ENST00000451517 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
NDUFA3-209ENST00000451517 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
NDUFA3-209ENST00000451517 PBRM1Q86U86 1689 aa18.02■□□□□ 0.47
NDUFA3-209ENST00000451517 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
NDUFA3-209ENST00000451517 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
NDUFA3-209ENST00000451517 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
NDUFA3-209ENST00000451517 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
NDUFA3-209ENST00000451517 CLIP1P30622 1438 aa17.91■□□□□ 0.46
NDUFA3-209ENST00000451517 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.45
NDUFA3-209ENST00000451517 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
NDUFA3-209ENST00000451517 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
NDUFA3-209ENST00000451517 CTTNBP2Q8WZ74 1663 aa17.82■□□□□ 0.44
NDUFA3-209ENST00000451517 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
NDUFA3-209ENST00000451517 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms