RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
RFC4-210ENST00000449502 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
RFC4-210ENST00000449502 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
RFC4-210ENST00000449502 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
RFC4-210ENST00000449502 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
RFC4-210ENST00000449502 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
RFC4-210ENST00000449502 ARAP1Q96P48 1450 aa15.04■□□□□ -0
RFC4-210ENST00000449502 EFCAB5A4FU69 1503 aa15.03■□□□□ -0
RFC4-210ENST00000449502 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
RFC4-210ENST00000449502 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
RFC4-210ENST00000449502 IQGAP2Q13576 1575 aa15□□□□□ -0.01
RFC4-210ENST00000449502 NUP160Q12769 1436 aa15□□□□□ -0.01
RFC4-210ENST00000449502 FHOD3Q2V2M9 1422 aa15□□□□□ -0.01
RFC4-210ENST00000449502 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
RFC4-210ENST00000449502 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
RFC4-210ENST00000449502 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
RFC4-210ENST00000449502 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
RFC4-210ENST00000449502 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
RFC4-210ENST00000449502 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
RFC4-210ENST00000449502 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
RFC4-210ENST00000449502 UGGT2Q9NYU1 1516 aa14.93□□□□□ -0.02
RFC4-210ENST00000449502 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
RFC4-210ENST00000449502 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
RFC4-210ENST00000449502 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
RFC4-210ENST00000449502 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
RFC4-210ENST00000449502 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
RFC4-210ENST00000449502 DISP1Q96F81 1524 aa14.85□□□□□ -0.03
RFC4-210ENST00000449502 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
RFC4-210ENST00000449502 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
RFC4-210ENST00000449502 CHD1O14646 1710 aa14.82□□□□□ -0.04
RFC4-210ENST00000449502 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
RFC4-210ENST00000449502 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
RFC4-210ENST00000449502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
RFC4-210ENST00000449502 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
RFC4-210ENST00000449502 PCF11O94913 1555 aaKnown RBP14.8□□□□□ -0.04
RFC4-210ENST00000449502 PTPRGP23470 1445 aa14.79□□□□□ -0.04
RFC4-210ENST00000449502 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.04
RFC4-210ENST00000449502 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
RFC4-210ENST00000449502 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
RFC4-210ENST00000449502 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
RFC4-210ENST00000449502 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
RFC4-210ENST00000449502 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
RFC4-210ENST00000449502 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
RFC4-210ENST00000449502 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
RFC4-210ENST00000449502 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
RFC4-210ENST00000449502 PLB1Q6P1J6 1458 aa14.69□□□□□ -0.06
RFC4-210ENST00000449502 SHROOM2Q13796 1616 aa14.68□□□□□ -0.06
RFC4-210ENST00000449502 UACAQ9BZF9 1416 aa14.67□□□□□ -0.06
RFC4-210ENST00000449502 RAPGEF6Q8TEU7 1601 aa14.67□□□□□ -0.06
RFC4-210ENST00000449502 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
RFC4-210ENST00000449502 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
RFC4-210ENST00000449502 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
RFC4-210ENST00000449502 CDK13Q14004 1512 aaKnown RBP14.64□□□□□ -0.07
RFC4-210ENST00000449502 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
RFC4-210ENST00000449502 EHBP1L1Q8N3D4 1523 aa14.63□□□□□ -0.07
RFC4-210ENST00000449502 ABCA8O94911 1581 aa14.62□□□□□ -0.07
RFC4-210ENST00000449502 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
RFC4-210ENST00000449502 ERCC6L2Q5T890 1561 aa14.6□□□□□ -0.07
RFC4-210ENST00000449502 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
RFC4-210ENST00000449502 RRBP1Q9P2E9 1410 aaKnown RBP14.59□□□□□ -0.07
RFC4-210ENST00000449502 TROQ12816 1431 aaPredicted RBP14.58□□□□□ -0.07
RFC4-210ENST00000449502 ATP10BO94823 1461 aa14.58□□□□□ -0.08
RFC4-210ENST00000449502 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
RFC4-210ENST00000449502 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
RFC4-210ENST00000449502 ITGAEP38570 1179 aa14.56□□□□□ -0.08
RFC4-210ENST00000449502 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
RFC4-210ENST00000449502 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
RFC4-210ENST00000449502 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
RFC4-210ENST00000449502 SUPT6HQ7KZ85 1726 aaKnown RBP14.53□□□□□ -0.08
RFC4-210ENST00000449502 MAGI3Q5TCQ9 1506 aa14.53□□□□□ -0.08
RFC4-210ENST00000449502 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
RFC4-210ENST00000449502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.5□□□□□ -0.09
RFC4-210ENST00000449502 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
RFC4-210ENST00000449502 KCNH8Q96L42 1107 aa14.49□□□□□ -0.09
RFC4-210ENST00000449502 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
RFC4-210ENST00000449502 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
RFC4-210ENST00000449502 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
RFC4-210ENST00000449502 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.09
RFC4-210ENST00000449502 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
RFC4-210ENST00000449502 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
RFC4-210ENST00000449502 ZNF777Q9ULD5 760 aaPredicted RBP14.46□□□□□ -0.09
RFC4-210ENST00000449502 KIF14Q15058 1648 aa14.44□□□□□ -0.1
RFC4-210ENST00000449502 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
RFC4-210ENST00000449502 GPATCH8Q9UKJ3 1502 aaKnown RBP14.41□□□□□ -0.1
RFC4-210ENST00000449502 TCOF1Q13428 1488 aaKnown RBP14.39□□□□□ -0.11
RFC4-210ENST00000449502 HRCP23327 699 aa14.39□□□□□ -0.11
RFC4-210ENST00000449502 ADCY10Q96PN6 1610 aa14.39□□□□□ -0.11
RFC4-210ENST00000449502 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
RFC4-210ENST00000449502 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
RFC4-210ENST00000449502 ZCCHC11Q5TAX3 1644 aaKnown RBP14.38□□□□□ -0.11
RFC4-210ENST00000449502 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
RFC4-210ENST00000449502 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
RFC4-210ENST00000449502 ZNF644Q9H582 1327 aaPredicted RBP14.37□□□□□ -0.11
RFC4-210ENST00000449502 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
RFC4-210ENST00000449502 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
RFC4-210ENST00000449502 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
RFC4-210ENST00000449502 TSPY4P0CV99 314 aa14.34□□□□□ -0.11
RFC4-210ENST00000449502 TSPY10P0CW01 314 aa14.34□□□□□ -0.11
RFC4-210ENST00000449502 RSPH4AQ5TD94 716 aa14.33□□□□□ -0.12
RFC4-210ENST00000449502 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms