RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
CALD1-211ENST00000445569 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
CALD1-211ENST00000445569 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
CALD1-211ENST00000445569 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
CALD1-211ENST00000445569 APLP2Q06481 763 aa16.17■□□□□ 0.18
CALD1-211ENST00000445569 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
CALD1-211ENST00000445569 SAMD9Q5K651 1589 aa16.14■□□□□ 0.17
CALD1-211ENST00000445569 FBLN2P98095 1184 aa16.14■□□□□ 0.17
CALD1-211ENST00000445569 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
CALD1-211ENST00000445569 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
CALD1-211ENST00000445569 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
CALD1-211ENST00000445569 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
CALD1-211ENST00000445569 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
CALD1-211ENST00000445569 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
CALD1-211ENST00000445569 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
CALD1-211ENST00000445569 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
CALD1-211ENST00000445569 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
CALD1-211ENST00000445569 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
CALD1-211ENST00000445569 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
CALD1-211ENST00000445569 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
CALD1-211ENST00000445569 HRCP23327 699 aa16.03■□□□□ 0.16
CALD1-211ENST00000445569 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
CALD1-211ENST00000445569 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.15
CALD1-211ENST00000445569 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.15
CALD1-211ENST00000445569 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
CALD1-211ENST00000445569 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
CALD1-211ENST00000445569 KIAA0586Q9BVV6 1533 aa15.99■□□□□ 0.15
CALD1-211ENST00000445569 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
CALD1-211ENST00000445569 HECW1Q76N89 1606 aa15.95■□□□□ 0.14
CALD1-211ENST00000445569 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
CALD1-211ENST00000445569 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
CALD1-211ENST00000445569 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
CALD1-211ENST00000445569 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
CALD1-211ENST00000445569 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
CALD1-211ENST00000445569 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
CALD1-211ENST00000445569 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
CALD1-211ENST00000445569 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
CALD1-211ENST00000445569 NUP160Q12769 1436 aa15.92■□□□□ 0.14
CALD1-211ENST00000445569 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
CALD1-211ENST00000445569 CHD1O14646 1710 aa15.89■□□□□ 0.13
CALD1-211ENST00000445569 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
CALD1-211ENST00000445569 CLASP1Q7Z460 1538 aa15.88■□□□□ 0.13
CALD1-211ENST00000445569 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
CALD1-211ENST00000445569 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
CALD1-211ENST00000445569 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
CALD1-211ENST00000445569 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
CALD1-211ENST00000445569 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
CALD1-211ENST00000445569 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
CALD1-211ENST00000445569 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
CALD1-211ENST00000445569 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
CALD1-211ENST00000445569 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
CALD1-211ENST00000445569 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
CALD1-211ENST00000445569 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
CALD1-211ENST00000445569 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
CALD1-211ENST00000445569 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
CALD1-211ENST00000445569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.74■□□□□ 0.11
CALD1-211ENST00000445569 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
CALD1-211ENST00000445569 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
CALD1-211ENST00000445569 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
CALD1-211ENST00000445569 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
CALD1-211ENST00000445569 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
CALD1-211ENST00000445569 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
CALD1-211ENST00000445569 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
CALD1-211ENST00000445569 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
CALD1-211ENST00000445569 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
CALD1-211ENST00000445569 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
CALD1-211ENST00000445569 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
CALD1-211ENST00000445569 ABCA8O94911 1581 aa15.66■□□□□ 0.1
CALD1-211ENST00000445569 ADCY10Q96PN6 1610 aa15.65■□□□□ 0.1
CALD1-211ENST00000445569 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
CALD1-211ENST00000445569 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
CALD1-211ENST00000445569 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
CALD1-211ENST00000445569 PTPN23Q9H3S7 1636 aa15.63■□□□□ 0.09
CALD1-211ENST00000445569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
CALD1-211ENST00000445569 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
CALD1-211ENST00000445569 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
CALD1-211ENST00000445569 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
CALD1-211ENST00000445569 PLB1Q6P1J6 1458 aa15.6■□□□□ 0.09
CALD1-211ENST00000445569 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
CALD1-211ENST00000445569 KIF14Q15058 1648 aa15.58■□□□□ 0.09
CALD1-211ENST00000445569 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
CALD1-211ENST00000445569 PTPRGP23470 1445 aa15.55■□□□□ 0.08
CALD1-211ENST00000445569 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
CALD1-211ENST00000445569 SETD5Q9C0A6 1442 aa15.52■□□□□ 0.08
CALD1-211ENST00000445569 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
CALD1-211ENST00000445569 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
CALD1-211ENST00000445569 GCC2Q8IWJ2 1684 aa15.51■□□□□ 0.07
CALD1-211ENST00000445569 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
CALD1-211ENST00000445569 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
CALD1-211ENST00000445569 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
CALD1-211ENST00000445569 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
CALD1-211ENST00000445569 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
CALD1-211ENST00000445569 ATP10BO94823 1461 aa15.47■□□□□ 0.07
CALD1-211ENST00000445569 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
CALD1-211ENST00000445569 ITGAEP38570 1179 aa15.47■□□□□ 0.07
CALD1-211ENST00000445569 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.07
CALD1-211ENST00000445569 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
CALD1-211ENST00000445569 CDC42BPAQ5VT25 1732 aa15.44■□□□□ 0.06
CALD1-211ENST00000445569 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
CALD1-211ENST00000445569 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms