RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
CCNDBP1-202ENST00000444658 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
CCNDBP1-202ENST00000444658 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
CCNDBP1-202ENST00000444658 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
CCNDBP1-202ENST00000444658 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
CCNDBP1-202ENST00000444658 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
CCNDBP1-202ENST00000444658 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.09
CCNDBP1-202ENST00000444658 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
CCNDBP1-202ENST00000444658 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
CCNDBP1-202ENST00000444658 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
CCNDBP1-202ENST00000444658 TRIM26Q12899 539 aaPredicted RBP14.42□□□□□ -0.1
CCNDBP1-202ENST00000444658 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
CCNDBP1-202ENST00000444658 KIAA0586Q9BVV6 1533 aa14.42□□□□□ -0.1
CCNDBP1-202ENST00000444658 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
CCNDBP1-202ENST00000444658 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
CCNDBP1-202ENST00000444658 APLP2Q06481 763 aa14.38□□□□□ -0.11
CCNDBP1-202ENST00000444658 NUP160Q12769 1436 aa14.38□□□□□ -0.11
CCNDBP1-202ENST00000444658 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
CCNDBP1-202ENST00000444658 FMN1Q68DA7 1419 aa14.34□□□□□ -0.11
CCNDBP1-202ENST00000444658 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
CCNDBP1-202ENST00000444658 IQGAP2Q13576 1575 aa14.33□□□□□ -0.12
CCNDBP1-202ENST00000444658 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
CCNDBP1-202ENST00000444658 FBLN2P98095 1184 aa14.32□□□□□ -0.12
CCNDBP1-202ENST00000444658 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
CCNDBP1-202ENST00000444658 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
CCNDBP1-202ENST00000444658 CASKIN1Q8WXD9 1431 aa14.29□□□□□ -0.12
CCNDBP1-202ENST00000444658 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
CCNDBP1-202ENST00000444658 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.12
CCNDBP1-202ENST00000444658 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.13
CCNDBP1-202ENST00000444658 CEP170Q5SW79 1584 aa14.25□□□□□ -0.13
CCNDBP1-202ENST00000444658 CARMIL2Q6F5E8 1435 aa14.25□□□□□ -0.13
CCNDBP1-202ENST00000444658 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
CCNDBP1-202ENST00000444658 DISP1Q96F81 1524 aa14.24□□□□□ -0.13
CCNDBP1-202ENST00000444658 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
CCNDBP1-202ENST00000444658 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
CCNDBP1-202ENST00000444658 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
CCNDBP1-202ENST00000444658 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
CCNDBP1-202ENST00000444658 KIAA0556O60303 1618 aa14.17□□□□□ -0.14
CCNDBP1-202ENST00000444658 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
CCNDBP1-202ENST00000444658 TIAM1Q13009 1591 aa14.14□□□□□ -0.15
CCNDBP1-202ENST00000444658 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
CCNDBP1-202ENST00000444658 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
CCNDBP1-202ENST00000444658 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
CCNDBP1-202ENST00000444658 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
CCNDBP1-202ENST00000444658 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
CCNDBP1-202ENST00000444658 CHD1O14646 1710 aa14.1□□□□□ -0.15
CCNDBP1-202ENST00000444658 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
CCNDBP1-202ENST00000444658 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
CCNDBP1-202ENST00000444658 CDK11AQ9UQ88 783 aaPredicted RBP14.1□□□□□ -0.15
CCNDBP1-202ENST00000444658 PTPRGP23470 1445 aa14.09□□□□□ -0.15
CCNDBP1-202ENST00000444658 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.16
CCNDBP1-202ENST00000444658 RRBP1Q9P2E9 1410 aaKnown RBP14.08□□□□□ -0.16
CCNDBP1-202ENST00000444658 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
CCNDBP1-202ENST00000444658 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
CCNDBP1-202ENST00000444658 HRCP23327 699 aa14.06□□□□□ -0.16
CCNDBP1-202ENST00000444658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCNDBP1-202ENST00000444658 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
CCNDBP1-202ENST00000444658 NUP153P49790 1475 aaKnown RBP14.04□□□□□ -0.16
CCNDBP1-202ENST00000444658 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
CCNDBP1-202ENST00000444658 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
CCNDBP1-202ENST00000444658 RAPGEF6Q8TEU7 1601 aa14.02□□□□□ -0.17
CCNDBP1-202ENST00000444658 CCNB3Q8WWL7 1395 aa14.01□□□□□ -0.17
CCNDBP1-202ENST00000444658 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
CCNDBP1-202ENST00000444658 ABCA8O94911 1581 aa14.01□□□□□ -0.17
CCNDBP1-202ENST00000444658 UACAQ9BZF9 1416 aa14.01□□□□□ -0.17
CCNDBP1-202ENST00000444658 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
CCNDBP1-202ENST00000444658 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
CCNDBP1-202ENST00000444658 PLEKHD1A6NEE1 506 aa13.98□□□□□ -0.17
CCNDBP1-202ENST00000444658 ARHGEF11O15085 1522 aa13.98□□□□□ -0.17
CCNDBP1-202ENST00000444658 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
CCNDBP1-202ENST00000444658 ATP10BO94823 1461 aa13.97□□□□□ -0.17
CCNDBP1-202ENST00000444658 NCOA2Q15596 1464 aa13.95□□□□□ -0.18
CCNDBP1-202ENST00000444658 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
CCNDBP1-202ENST00000444658 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
CCNDBP1-202ENST00000444658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 LRRIQ1Q96JM4 1722 aa13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 MAGI3Q5TCQ9 1506 aa13.93□□□□□ -0.18
CCNDBP1-202ENST00000444658 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
CCNDBP1-202ENST00000444658 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
CCNDBP1-202ENST00000444658 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
CCNDBP1-202ENST00000444658 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
CCNDBP1-202ENST00000444658 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
CCNDBP1-202ENST00000444658 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
CCNDBP1-202ENST00000444658 KDM5BQ9UGL1 1544 aa13.88□□□□□ -0.19
CCNDBP1-202ENST00000444658 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
CCNDBP1-202ENST00000444658 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
CCNDBP1-202ENST00000444658 TCOF1Q13428 1488 aaKnown RBP13.86□□□□□ -0.19
CCNDBP1-202ENST00000444658 FAM50AQ14320 339 aaKnown RBP13.86□□□□□ -0.19
CCNDBP1-202ENST00000444658 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
CCNDBP1-202ENST00000444658 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
CCNDBP1-202ENST00000444658 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
CCNDBP1-202ENST00000444658 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
CCNDBP1-202ENST00000444658 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
CCNDBP1-202ENST00000444658 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
CCNDBP1-202ENST00000444658 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
CCNDBP1-202ENST00000444658 RSPH4AQ5TD94 716 aa13.8□□□□□ -0.2
CCNDBP1-202ENST00000444658 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms