RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
SMPD4P1-203ENST00000443839 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
SMPD4P1-203ENST00000443839 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
SMPD4P1-203ENST00000443839 FBLN2P98095 1184 aa14.96□□□□□ -0.01
SMPD4P1-203ENST00000443839 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SMPD4P1-203ENST00000443839 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
SMPD4P1-203ENST00000443839 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
SMPD4P1-203ENST00000443839 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
SMPD4P1-203ENST00000443839 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
SMPD4P1-203ENST00000443839 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
SMPD4P1-203ENST00000443839 P3H3Q8IVL6 736 aa14.87□□□□□ -0.03
SMPD4P1-203ENST00000443839 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
SMPD4P1-203ENST00000443839 NUP160Q12769 1436 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 CHD1O14646 1710 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
SMPD4P1-203ENST00000443839 APLP2Q06481 763 aa14.82□□□□□ -0.04
SMPD4P1-203ENST00000443839 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
SMPD4P1-203ENST00000443839 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
SMPD4P1-203ENST00000443839 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SMPD4P1-203ENST00000443839 SENP3Q9H4L4 574 aaPredicted RBP14.75□□□□□ -0.05
SMPD4P1-203ENST00000443839 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
SMPD4P1-203ENST00000443839 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 DISP1Q96F81 1524 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 TRIM26Q12899 539 aaPredicted RBP14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
SMPD4P1-203ENST00000443839 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
SMPD4P1-203ENST00000443839 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
SMPD4P1-203ENST00000443839 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
SMPD4P1-203ENST00000443839 CASKIN1Q8WXD9 1431 aa14.71□□□□□ -0.05
SMPD4P1-203ENST00000443839 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
SMPD4P1-203ENST00000443839 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
SMPD4P1-203ENST00000443839 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
SMPD4P1-203ENST00000443839 CLASP1Q7Z460 1538 aa14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 KANK4Q5T7N3 995 aaPredicted RBP14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 CFAP43Q8NDM7 1665 aa14.64□□□□□ -0.07
SMPD4P1-203ENST00000443839 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
SMPD4P1-203ENST00000443839 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
SMPD4P1-203ENST00000443839 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 LRRIQ1Q96JM4 1722 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 PTPRGP23470 1445 aa14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 EPRSP07814 1512 aaKnown RBP14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
SMPD4P1-203ENST00000443839 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
SMPD4P1-203ENST00000443839 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
SMPD4P1-203ENST00000443839 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
SMPD4P1-203ENST00000443839 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
SMPD4P1-203ENST00000443839 ABCA8O94911 1581 aa14.52□□□□□ -0.08
SMPD4P1-203ENST00000443839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
SMPD4P1-203ENST00000443839 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
SMPD4P1-203ENST00000443839 EHBP1L1Q8N3D4 1523 aa14.5□□□□□ -0.09
SMPD4P1-203ENST00000443839 UACAQ9BZF9 1416 aa14.48□□□□□ -0.09
SMPD4P1-203ENST00000443839 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
SMPD4P1-203ENST00000443839 MAGI3Q5TCQ9 1506 aa14.47□□□□□ -0.09
SMPD4P1-203ENST00000443839 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.09
SMPD4P1-203ENST00000443839 PHLDB1Q86UU1 1377 aa14.46□□□□□ -0.09
SMPD4P1-203ENST00000443839 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
SMPD4P1-203ENST00000443839 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
SMPD4P1-203ENST00000443839 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
SMPD4P1-203ENST00000443839 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
SMPD4P1-203ENST00000443839 ATP10BO94823 1461 aa14.43□□□□□ -0.1
SMPD4P1-203ENST00000443839 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
SMPD4P1-203ENST00000443839 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 MYOM3Q5VTT5 1437 aa14.38□□□□□ -0.11
SMPD4P1-203ENST00000443839 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
SMPD4P1-203ENST00000443839 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
SMPD4P1-203ENST00000443839 KIF14Q15058 1648 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 ADCY10Q96PN6 1610 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.11
SMPD4P1-203ENST00000443839 ITGAEP38570 1179 aa14.33□□□□□ -0.11
SMPD4P1-203ENST00000443839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMPD4P1-203ENST00000443839 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
SMPD4P1-203ENST00000443839 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
SMPD4P1-203ENST00000443839 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
SMPD4P1-203ENST00000443839 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 GPATCH8Q9UKJ3 1502 aaKnown RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 KCNH8Q96L42 1107 aa14.25□□□□□ -0.13
SMPD4P1-203ENST00000443839 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
SMPD4P1-203ENST00000443839 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
SMPD4P1-203ENST00000443839 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
SMPD4P1-203ENST00000443839 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
SMPD4P1-203ENST00000443839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMPD4P1-203ENST00000443839 HRCP23327 699 aa14.21□□□□□ -0.13
SMPD4P1-203ENST00000443839 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms