RNA–Protein interactions for RNA: ENST00000442046.5

MACF1-207, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-207ENST00000442046 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
MACF1-207ENST00000442046 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
MACF1-207ENST00000442046 ARAP1Q96P48 1450 aa21.27■■□□□ 1
MACF1-207ENST00000442046 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
MACF1-207ENST00000442046 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
MACF1-207ENST00000442046 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
MACF1-207ENST00000442046 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
MACF1-207ENST00000442046 HRCP23327 699 aa21.17■□□□□ 0.98
MACF1-207ENST00000442046 SAMD9Q5K651 1589 aa21.16■□□□□ 0.98
MACF1-207ENST00000442046 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
MACF1-207ENST00000442046 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
MACF1-207ENST00000442046 UGGT2Q9NYU1 1516 aa21.08■□□□□ 0.97
MACF1-207ENST00000442046 APLP2Q06481 763 aa21.08■□□□□ 0.96
MACF1-207ENST00000442046 NUP160Q12769 1436 aa21.07■□□□□ 0.96
MACF1-207ENST00000442046 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
MACF1-207ENST00000442046 FMN1Q68DA7 1419 aa21.05■□□□□ 0.96
MACF1-207ENST00000442046 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
MACF1-207ENST00000442046 MAP3K1Q13233 1512 aa21.03■□□□□ 0.96
MACF1-207ENST00000442046 CHD1O14646 1710 aa21.01■□□□□ 0.95
MACF1-207ENST00000442046 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
MACF1-207ENST00000442046 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
MACF1-207ENST00000442046 FBLN2P98095 1184 aa20.98■□□□□ 0.95
MACF1-207ENST00000442046 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
MACF1-207ENST00000442046 KIAA0556O60303 1618 aa20.95■□□□□ 0.94
MACF1-207ENST00000442046 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.94
MACF1-207ENST00000442046 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
MACF1-207ENST00000442046 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
MACF1-207ENST00000442046 TIAM1Q13009 1591 aa20.94■□□□□ 0.94
MACF1-207ENST00000442046 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
MACF1-207ENST00000442046 CARMIL2Q6F5E8 1435 aa20.87■□□□□ 0.93
MACF1-207ENST00000442046 HECW1Q76N89 1606 aa20.85■□□□□ 0.93
MACF1-207ENST00000442046 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
MACF1-207ENST00000442046 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
MACF1-207ENST00000442046 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
MACF1-207ENST00000442046 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
MACF1-207ENST00000442046 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
MACF1-207ENST00000442046 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
MACF1-207ENST00000442046 KANK4Q5T7N3 995 aaPredicted RBP20.79■□□□□ 0.92
MACF1-207ENST00000442046 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
MACF1-207ENST00000442046 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.91
MACF1-207ENST00000442046 RAPGEF6Q8TEU7 1601 aa20.76■□□□□ 0.91
MACF1-207ENST00000442046 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
MACF1-207ENST00000442046 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
MACF1-207ENST00000442046 EPRSP07814 1512 aaKnown RBP20.71■□□□□ 0.91
MACF1-207ENST00000442046 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
MACF1-207ENST00000442046 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
MACF1-207ENST00000442046 MTUS2Q5JR59 1369 aa20.66■□□□□ 0.9
MACF1-207ENST00000442046 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
MACF1-207ENST00000442046 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
MACF1-207ENST00000442046 ABCA8O94911 1581 aa20.65■□□□□ 0.9
MACF1-207ENST00000442046 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
MACF1-207ENST00000442046 CDK13Q14004 1512 aaKnown RBP20.61■□□□□ 0.89
MACF1-207ENST00000442046 PTPRGP23470 1445 aa20.6■□□□□ 0.89
MACF1-207ENST00000442046 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
MACF1-207ENST00000442046 MAGI3Q5TCQ9 1506 aa20.57■□□□□ 0.88
MACF1-207ENST00000442046 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
MACF1-207ENST00000442046 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
MACF1-207ENST00000442046 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
MACF1-207ENST00000442046 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
MACF1-207ENST00000442046 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
MACF1-207ENST00000442046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.88
MACF1-207ENST00000442046 UACAQ9BZF9 1416 aa20.51■□□□□ 0.87
MACF1-207ENST00000442046 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
MACF1-207ENST00000442046 ADCY10Q96PN6 1610 aa20.49■□□□□ 0.87
MACF1-207ENST00000442046 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
MACF1-207ENST00000442046 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
MACF1-207ENST00000442046 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
MACF1-207ENST00000442046 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
MACF1-207ENST00000442046 ATP10BO94823 1461 aa20.46■□□□□ 0.87
MACF1-207ENST00000442046 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
MACF1-207ENST00000442046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
MACF1-207ENST00000442046 HNRNPUL2Q1KMD3 747 aaKnown RBP20.43■□□□□ 0.86
MACF1-207ENST00000442046 ARID3CA6NKF2 412 aa20.42■□□□□ 0.86
MACF1-207ENST00000442046 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
MACF1-207ENST00000442046 MIA2Q96PC5 1412 aa20.42■□□□□ 0.86
MACF1-207ENST00000442046 ITSN2Q9NZM3 1697 aa20.4■□□□□ 0.86
MACF1-207ENST00000442046 PTPN23Q9H3S7 1636 aa20.4■□□□□ 0.86
MACF1-207ENST00000442046 KIF14Q15058 1648 aa20.39■□□□□ 0.86
MACF1-207ENST00000442046 TCOF1Q13428 1488 aaKnown RBP20.38■□□□□ 0.85
MACF1-207ENST00000442046 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
MACF1-207ENST00000442046 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
MACF1-207ENST00000442046 KDM5BQ9UGL1 1544 aa20.35■□□□□ 0.85
MACF1-207ENST00000442046 ZCCHC11Q5TAX3 1644 aaKnown RBP20.33■□□□□ 0.84
MACF1-207ENST00000442046 ABCC10Q5T3U5 1492 aa20.29■□□□□ 0.84
MACF1-207ENST00000442046 CDC42BPAQ5VT25 1732 aa20.29■□□□□ 0.84
MACF1-207ENST00000442046 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
MACF1-207ENST00000442046 ITGAEP38570 1179 aa20.25■□□□□ 0.83
MACF1-207ENST00000442046 CLSPNQ9HAW4 1339 aa20.25■□□□□ 0.83
MACF1-207ENST00000442046 DNMT1P26358 1616 aaKnown RBP20.22■□□□□ 0.83
MACF1-207ENST00000442046 SETD5Q9C0A6 1442 aa20.22■□□□□ 0.83
MACF1-207ENST00000442046 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
MACF1-207ENST00000442046 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
MACF1-207ENST00000442046 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
MACF1-207ENST00000442046 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
MACF1-207ENST00000442046 MYO5CQ9NQX4 1742 aa20.19■□□□□ 0.82
MACF1-207ENST00000442046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
MACF1-207ENST00000442046 HFM1A2PYH4 1435 aa20.17■□□□□ 0.82
MACF1-207ENST00000442046 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
MACF1-207ENST00000442046 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
MACF1-207ENST00000442046 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms