RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
PDPK1-204ENST00000441549 ADAMTS12P58397 1594 aa37.14■■■■□ 3.54
PDPK1-204ENST00000441549 EFCAB5A4FU69 1503 aa37.11■■■■□ 3.53
PDPK1-204ENST00000441549 HRCP23327 699 aa37.11■■■■□ 3.53
PDPK1-204ENST00000441549 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
PDPK1-204ENST00000441549 TTBK1Q5TCY1 1321 aaPredicted RBP37.02■■■■□ 3.52
PDPK1-204ENST00000441549 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
PDPK1-204ENST00000441549 SAMD9Q5K651 1589 aa36.89■■■■□ 3.5
PDPK1-204ENST00000441549 MAP3K1Q13233 1512 aa36.89■■■■□ 3.5
PDPK1-204ENST00000441549 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
PDPK1-204ENST00000441549 FHOD3Q2V2M9 1422 aa36.86■■■■□ 3.49
PDPK1-204ENST00000441549 P3H3Q8IVL6 736 aa36.82■■■■□ 3.49
PDPK1-204ENST00000441549 IQGAP2Q13576 1575 aa36.8■■■■□ 3.48
PDPK1-204ENST00000441549 FMN1Q68DA7 1419 aa36.79■■■■□ 3.48
PDPK1-204ENST00000441549 GRIN2AQ12879 1464 aa36.78■■■■□ 3.48
PDPK1-204ENST00000441549 KANK4Q5T7N3 995 aaPredicted RBP36.76■■■■□ 3.48
PDPK1-204ENST00000441549 PCF11O94913 1555 aaKnown RBP36.76■■■■□ 3.48
PDPK1-204ENST00000441549 TIAM1Q13009 1591 aa36.76■■■■□ 3.47
PDPK1-204ENST00000441549 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
PDPK1-204ENST00000441549 CASKIN1Q8WXD9 1431 aa36.74■■■■□ 3.47
PDPK1-204ENST00000441549 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
PDPK1-204ENST00000441549 KIAA0586Q9BVV6 1533 aa36.7■■■■□ 3.47
PDPK1-204ENST00000441549 UGGT2Q9NYU1 1516 aa36.66■■■■□ 3.46
PDPK1-204ENST00000441549 CFAP43Q8NDM7 1665 aa36.65■■■■□ 3.46
PDPK1-204ENST00000441549 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
PDPK1-204ENST00000441549 LRRC9Q6ZRR7 1453 aa36.59■■■■□ 3.45
PDPK1-204ENST00000441549 ZEB1P37275 1124 aaPredicted RBP36.57■■■■□ 3.45
PDPK1-204ENST00000441549 RRBP1Q9P2E9 1410 aaKnown RBP36.51■■■■□ 3.44
PDPK1-204ENST00000441549 CEP170Q5SW79 1584 aa36.51■■■■□ 3.44
PDPK1-204ENST00000441549 NUP160Q12769 1436 aa36.51■■■■□ 3.43
PDPK1-204ENST00000441549 ATP1B4Q9UN42 357 aaPredicted RBP36.49■■■■□ 3.43
PDPK1-204ENST00000441549 FBLN2P98095 1184 aa36.43■■■■□ 3.42
PDPK1-204ENST00000441549 KIAA0556O60303 1618 aa36.43■■■■□ 3.42
PDPK1-204ENST00000441549 DISP1Q96F81 1524 aa36.42■■■■□ 3.42
PDPK1-204ENST00000441549 CCNB3Q8WWL7 1395 aa36.35■■■■□ 3.41
PDPK1-204ENST00000441549 HECW1Q76N89 1606 aa36.34■■■■□ 3.41
PDPK1-204ENST00000441549 HNRNPUL2Q1KMD3 747 aaKnown RBP36.34■■■■□ 3.41
PDPK1-204ENST00000441549 LRRIQ1Q96JM4 1722 aa36.34■■■■□ 3.41
PDPK1-204ENST00000441549 CCDC18Q5T9S5 1454 aa36.33■■■■□ 3.41
PDPK1-204ENST00000441549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.31■■■■□ 3.4
PDPK1-204ENST00000441549 CCER1Q8TC90 406 aaPredicted RBP36.28■■■■□ 3.4
PDPK1-204ENST00000441549 PHLDB1Q86UU1 1377 aa36.26■■■■□ 3.39
PDPK1-204ENST00000441549 JPH4Q96JJ6 628 aa36.24■■■■□ 3.39
PDPK1-204ENST00000441549 MTUS2Q5JR59 1369 aa36.23■■■■□ 3.39
PDPK1-204ENST00000441549 CARMIL2Q6F5E8 1435 aa36.23■■■■□ 3.39
PDPK1-204ENST00000441549 EHBP1L1Q8N3D4 1523 aa36.19■■■■□ 3.38
PDPK1-204ENST00000441549 EPRSP07814 1512 aaKnown RBP36.19■■■■□ 3.38
PDPK1-204ENST00000441549 CHD1O14646 1710 aa36.18■■■■□ 3.38
PDPK1-204ENST00000441549 RAPGEF6Q8TEU7 1601 aa36.12■■■■□ 3.37
PDPK1-204ENST00000441549 SUPT6HQ7KZ85 1726 aaKnown RBP36.1■■■■□ 3.37
PDPK1-204ENST00000441549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.09■■■■□ 3.37
PDPK1-204ENST00000441549 NCOA2Q15596 1464 aa36.05■■■■□ 3.36
PDPK1-204ENST00000441549 MAGI3Q5TCQ9 1506 aa36.05■■■■□ 3.36
PDPK1-204ENST00000441549 NUP153P49790 1475 aaKnown RBP36.03■■■■□ 3.36
PDPK1-204ENST00000441549 CDK13Q14004 1512 aaKnown RBP36.03■■■■□ 3.36
PDPK1-204ENST00000441549 ARHGEF11O15085 1522 aa36.02■■■■□ 3.36
PDPK1-204ENST00000441549 FGD6Q6ZV73 1430 aa36■■■■□ 3.35
PDPK1-204ENST00000441549 MYOM3Q5VTT5 1437 aa35.96■■■■□ 3.35
PDPK1-204ENST00000441549 PRG4Q92954 1404 aaPredicted RBP35.95■■■■□ 3.35
PDPK1-204ENST00000441549 SHROOM2Q13796 1616 aa35.94■■■■□ 3.34
PDPK1-204ENST00000441549 FAM50AQ14320 339 aaKnown RBP35.94■■■■□ 3.34
PDPK1-204ENST00000441549 PLB1Q6P1J6 1458 aa35.93■■■■□ 3.34
PDPK1-204ENST00000441549 CDK11AQ9UQ88 783 aaPredicted RBP35.88■■■■□ 3.34
PDPK1-204ENST00000441549 ABCA8O94911 1581 aa35.88■■■■□ 3.33
PDPK1-204ENST00000441549 ITGAEP38570 1179 aa35.88■■■■□ 3.33
PDPK1-204ENST00000441549 ARID3CA6NKF2 412 aa35.83■■■■□ 3.33
PDPK1-204ENST00000441549 CLASP1Q7Z460 1538 aa35.8■■■■□ 3.32
PDPK1-204ENST00000441549 PTPRGP23470 1445 aa35.8■■■■□ 3.32
PDPK1-204ENST00000441549 MIA2Q96PC5 1412 aa35.76■■■■□ 3.32
PDPK1-204ENST00000441549 PTPN23Q9H3S7 1636 aa35.76■■■■□ 3.32
PDPK1-204ENST00000441549 TCOF1Q13428 1488 aaKnown RBP35.75■■■■□ 3.31
PDPK1-204ENST00000441549 CLSPNQ9HAW4 1339 aa35.75■■■■□ 3.31
PDPK1-204ENST00000441549 TROQ12816 1431 aaPredicted RBP35.74■■■■□ 3.31
PDPK1-204ENST00000441549 SETD5Q9C0A6 1442 aa35.74■■■■□ 3.31
PDPK1-204ENST00000441549 DHX57Q6P158 1386 aaKnown RBP35.73■■■■□ 3.31
PDPK1-204ENST00000441549 RAB3GAP2Q9H2M9 1393 aa35.69■■■■□ 3.3
PDPK1-204ENST00000441549 ATP10BO94823 1461 aa35.66■■■■□ 3.3
PDPK1-204ENST00000441549 ADCY10Q96PN6 1610 aa35.66■■■■□ 3.3
PDPK1-204ENST00000441549 UACAQ9BZF9 1416 aa35.61■■■■□ 3.29
PDPK1-204ENST00000441549 ERCC6L2Q5T890 1561 aa35.6■■■■□ 3.29
PDPK1-204ENST00000441549 PTPRKQ15262 1439 aa35.57■■■■□ 3.29
PDPK1-204ENST00000441549 PLEKHD1A6NEE1 506 aa35.57■■■■□ 3.28
PDPK1-204ENST00000441549 HFM1A2PYH4 1435 aa35.53■■■■□ 3.28
PDPK1-204ENST00000441549 ITSN2Q9NZM3 1697 aa35.51■■■■□ 3.28
PDPK1-204ENST00000441549 KIF14Q15058 1648 aa35.5■■■■□ 3.27
PDPK1-204ENST00000441549 ABCC2Q92887 1545 aa35.48■■■■□ 3.27
PDPK1-204ENST00000441549 GPATCH8Q9UKJ3 1502 aaKnown RBP35.46■■■■□ 3.27
PDPK1-204ENST00000441549 AKNAQ7Z591 1439 aa35.43■■■■□ 3.26
PDPK1-204ENST00000441549 UHRF1BP1LA0JNW5 1464 aa35.41■■■■□ 3.26
PDPK1-204ENST00000441549 ABCC10Q5T3U5 1492 aa35.41■■■■□ 3.26
PDPK1-204ENST00000441549 NAIPQ13075 1403 aa35.41■■■■□ 3.26
PDPK1-204ENST00000441549 CFDP1Q9UEE9 299 aaPredicted RBP35.37■■■■□ 3.25
PDPK1-204ENST00000441549 DNMT1P26358 1616 aaKnown RBP35.37■■■■□ 3.25
PDPK1-204ENST00000441549 DAPK1P53355 1430 aa35.35■■■■□ 3.25
PDPK1-204ENST00000441549 MAPKBP1O60336 1514 aa35.33■■■■□ 3.25
PDPK1-204ENST00000441549 CAMSAP2Q08AD1 1489 aa35.33■■■■□ 3.25
PDPK1-204ENST00000441549 GCC2Q8IWJ2 1684 aa35.32■■■■□ 3.24
PDPK1-204ENST00000441549 CDC42BPAQ5VT25 1732 aa35.31■■■■□ 3.24
PDPK1-204ENST00000441549 ABCC5O15440 1437 aa35.3■■■■□ 3.24
PDPK1-204ENST00000441549 ROCK1Q13464 1354 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms