RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
LINC01271-201ENST00000441214 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
LINC01271-201ENST00000441214 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
LINC01271-201ENST00000441214 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
LINC01271-201ENST00000441214 KIF21BO75037 1637 aa20.7■□□□□ 0.9
LINC01271-201ENST00000441214 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
LINC01271-201ENST00000441214 FBLN2P98095 1184 aa20.63■□□□□ 0.89
LINC01271-201ENST00000441214 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
LINC01271-201ENST00000441214 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
LINC01271-201ENST00000441214 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
LINC01271-201ENST00000441214 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
LINC01271-201ENST00000441214 CUL7Q14999 1698 aa20.58■□□□□ 0.88
LINC01271-201ENST00000441214 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
LINC01271-201ENST00000441214 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
LINC01271-201ENST00000441214 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
LINC01271-201ENST00000441214 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
LINC01271-201ENST00000441214 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
LINC01271-201ENST00000441214 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
LINC01271-201ENST00000441214 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
LINC01271-201ENST00000441214 CLIP1P30622 1438 aa20.45■□□□□ 0.86
LINC01271-201ENST00000441214 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
LINC01271-201ENST00000441214 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
LINC01271-201ENST00000441214 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
LINC01271-201ENST00000441214 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
LINC01271-201ENST00000441214 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
LINC01271-201ENST00000441214 CHD1O14646 1710 aa20.35■□□□□ 0.85
LINC01271-201ENST00000441214 UBE2Q2Q8WVN8 375 aa20.34■□□□□ 0.85
LINC01271-201ENST00000441214 CEP170Q5SW79 1584 aa20.33■□□□□ 0.84
LINC01271-201ENST00000441214 DAXXQ9UER7 740 aaPredicted RBP20.31■□□□□ 0.84
LINC01271-201ENST00000441214 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
LINC01271-201ENST00000441214 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
LINC01271-201ENST00000441214 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
LINC01271-201ENST00000441214 IQGAP2Q13576 1575 aa20.26■□□□□ 0.83
LINC01271-201ENST00000441214 EIF5BO60841 1220 aaKnown RBP20.25■□□□□ 0.83
LINC01271-201ENST00000441214 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
LINC01271-201ENST00000441214 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
LINC01271-201ENST00000441214 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
LINC01271-201ENST00000441214 KIAA0586Q9BVV6 1533 aa20.21■□□□□ 0.83
LINC01271-201ENST00000441214 NUP160Q12769 1436 aa20.2■□□□□ 0.82
LINC01271-201ENST00000441214 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
LINC01271-201ENST00000441214 VPS8Q8N3P4 1428 aa20.17■□□□□ 0.82
LINC01271-201ENST00000441214 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
LINC01271-201ENST00000441214 ARID3CA6NKF2 412 aa20.13■□□□□ 0.81
LINC01271-201ENST00000441214 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
LINC01271-201ENST00000441214 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
LINC01271-201ENST00000441214 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
LINC01271-201ENST00000441214 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
LINC01271-201ENST00000441214 DISP1Q96F81 1524 aa20.1■□□□□ 0.81
LINC01271-201ENST00000441214 UGGT2Q9NYU1 1516 aa20.08■□□□□ 0.81
LINC01271-201ENST00000441214 KIAA0556O60303 1618 aa20.06■□□□□ 0.8
LINC01271-201ENST00000441214 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
LINC01271-201ENST00000441214 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
LINC01271-201ENST00000441214 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
LINC01271-201ENST00000441214 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
LINC01271-201ENST00000441214 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
LINC01271-201ENST00000441214 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
LINC01271-201ENST00000441214 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
LINC01271-201ENST00000441214 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
LINC01271-201ENST00000441214 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
LINC01271-201ENST00000441214 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
LINC01271-201ENST00000441214 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
LINC01271-201ENST00000441214 PLB1Q6P1J6 1458 aa19.94■□□□□ 0.78
LINC01271-201ENST00000441214 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
LINC01271-201ENST00000441214 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
LINC01271-201ENST00000441214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
LINC01271-201ENST00000441214 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
LINC01271-201ENST00000441214 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
LINC01271-201ENST00000441214 PTPRGP23470 1445 aa19.88■□□□□ 0.77
LINC01271-201ENST00000441214 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
LINC01271-201ENST00000441214 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
LINC01271-201ENST00000441214 MIER1Q8N108 512 aa19.87■□□□□ 0.77
LINC01271-201ENST00000441214 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
LINC01271-201ENST00000441214 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
LINC01271-201ENST00000441214 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
LINC01271-201ENST00000441214 NUP153P49790 1475 aaKnown RBP19.82■□□□□ 0.76
LINC01271-201ENST00000441214 HECW1Q76N89 1606 aa19.81■□□□□ 0.76
LINC01271-201ENST00000441214 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
LINC01271-201ENST00000441214 DEKP35659 375 aaKnown RBP19.79■□□□□ 0.76
LINC01271-201ENST00000441214 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
LINC01271-201ENST00000441214 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
LINC01271-201ENST00000441214 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
LINC01271-201ENST00000441214 DNAJC5Q9H3Z4 198 aa19.77■□□□□ 0.75
LINC01271-201ENST00000441214 PKNOX2Q96KN3 472 aa19.76■□□□□ 0.75
LINC01271-201ENST00000441214 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
LINC01271-201ENST00000441214 ABCA8O94911 1581 aa19.75■□□□□ 0.75
LINC01271-201ENST00000441214 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
LINC01271-201ENST00000441214 MSH5O43196 834 aa19.71■□□□□ 0.75
LINC01271-201ENST00000441214 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
LINC01271-201ENST00000441214 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
LINC01271-201ENST00000441214 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
LINC01271-201ENST00000441214 MAP3K1Q13233 1512 aa19.69■□□□□ 0.74
LINC01271-201ENST00000441214 ATP10BO94823 1461 aa19.68■□□□□ 0.74
LINC01271-201ENST00000441214 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
LINC01271-201ENST00000441214 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
LINC01271-201ENST00000441214 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
LINC01271-201ENST00000441214 ITGAEP38570 1179 aa19.64■□□□□ 0.74
LINC01271-201ENST00000441214 ABCC2Q92887 1545 aa19.64■□□□□ 0.73
LINC01271-201ENST00000441214 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
LINC01271-201ENST00000441214 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
LINC01271-201ENST00000441214 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms