RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
LINC01271-201ENST00000441214 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
LINC01271-201ENST00000441214 ABCC9O60706 1549 aa24.86■■□□□ 1.57
LINC01271-201ENST00000441214 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
LINC01271-201ENST00000441214 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
LINC01271-201ENST00000441214 PELP1Q8IZL8 1130 aaKnown RBP24.54■■□□□ 1.52
LINC01271-201ENST00000441214 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
LINC01271-201ENST00000441214 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
LINC01271-201ENST00000441214 MYT1Q01538 1121 aa24.12■■□□□ 1.45
LINC01271-201ENST00000441214 NACADO15069 1562 aa24.01■■□□□ 1.43
LINC01271-201ENST00000441214 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
LINC01271-201ENST00000441214 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
LINC01271-201ENST00000441214 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
LINC01271-201ENST00000441214 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
LINC01271-201ENST00000441214 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC01271-201ENST00000441214 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
LINC01271-201ENST00000441214 HRCP23327 699 aa23.21■■□□□ 1.31
LINC01271-201ENST00000441214 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
LINC01271-201ENST00000441214 TTBK1Q5TCY1 1321 aaPredicted RBP23.1■■□□□ 1.29
LINC01271-201ENST00000441214 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
LINC01271-201ENST00000441214 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
LINC01271-201ENST00000441214 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
LINC01271-201ENST00000441214 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
LINC01271-201ENST00000441214 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
LINC01271-201ENST00000441214 WIZO95785 1651 aa22.71■■□□□ 1.23
LINC01271-201ENST00000441214 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
LINC01271-201ENST00000441214 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
LINC01271-201ENST00000441214 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
LINC01271-201ENST00000441214 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
LINC01271-201ENST00000441214 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
LINC01271-201ENST00000441214 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
LINC01271-201ENST00000441214 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
LINC01271-201ENST00000441214 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
LINC01271-201ENST00000441214 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
LINC01271-201ENST00000441214 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
LINC01271-201ENST00000441214 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
LINC01271-201ENST00000441214 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
LINC01271-201ENST00000441214 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
LINC01271-201ENST00000441214 PRKCSHP14314 528 aaPredicted RBP21.95■■□□□ 1.1
LINC01271-201ENST00000441214 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
LINC01271-201ENST00000441214 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
LINC01271-201ENST00000441214 BCL11AQ9H165 835 aa21.86■■□□□ 1.09
LINC01271-201ENST00000441214 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
LINC01271-201ENST00000441214 NESP48681 1621 aa21.76■■□□□ 1.07
LINC01271-201ENST00000441214 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
LINC01271-201ENST00000441214 ACIN1Q9UKV3 1341 aaKnown RBP21.69■■□□□ 1.06
LINC01271-201ENST00000441214 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
LINC01271-201ENST00000441214 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
LINC01271-201ENST00000441214 CFTRP13569 1480 aa21.67■■□□□ 1.06
LINC01271-201ENST00000441214 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
LINC01271-201ENST00000441214 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
LINC01271-201ENST00000441214 APLP2Q06481 763 aa21.59■■□□□ 1.05
LINC01271-201ENST00000441214 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
LINC01271-201ENST00000441214 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
LINC01271-201ENST00000441214 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
LINC01271-201ENST00000441214 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
LINC01271-201ENST00000441214 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
LINC01271-201ENST00000441214 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
LINC01271-201ENST00000441214 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
LINC01271-201ENST00000441214 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
LINC01271-201ENST00000441214 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
LINC01271-201ENST00000441214 CUX1P39880 1505 aa21.38■■□□□ 1.01
LINC01271-201ENST00000441214 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
LINC01271-201ENST00000441214 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
LINC01271-201ENST00000441214 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
LINC01271-201ENST00000441214 TOP2BQ02880 1626 aa21.29■■□□□ 1
LINC01271-201ENST00000441214 ERCC6Q03468 1493 aa21.29■■□□□ 1
LINC01271-201ENST00000441214 SOGA1O94964 1423 aa21.26■□□□□ 0.99
LINC01271-201ENST00000441214 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
LINC01271-201ENST00000441214 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
LINC01271-201ENST00000441214 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
LINC01271-201ENST00000441214 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
LINC01271-201ENST00000441214 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
LINC01271-201ENST00000441214 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
LINC01271-201ENST00000441214 ANP32EQ9BTT0 268 aa21.18■□□□□ 0.98
LINC01271-201ENST00000441214 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
LINC01271-201ENST00000441214 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
LINC01271-201ENST00000441214 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.97
LINC01271-201ENST00000441214 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
LINC01271-201ENST00000441214 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
LINC01271-201ENST00000441214 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
LINC01271-201ENST00000441214 CUX2O14529 1486 aa21.03■□□□□ 0.96
LINC01271-201ENST00000441214 CSRNP3Q8WYN3 585 aa20.99■□□□□ 0.95
LINC01271-201ENST00000441214 WDR62O43379 1518 aa20.99■□□□□ 0.95
LINC01271-201ENST00000441214 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
LINC01271-201ENST00000441214 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
LINC01271-201ENST00000441214 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.94
LINC01271-201ENST00000441214 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
LINC01271-201ENST00000441214 EEA1Q15075 1411 aa20.88■□□□□ 0.93
LINC01271-201ENST00000441214 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
LINC01271-201ENST00000441214 AQRO60306 1485 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC01271-201ENST00000441214 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
LINC01271-201ENST00000441214 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
LINC01271-201ENST00000441214 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
LINC01271-201ENST00000441214 IGF1RP08069 1367 aa20.81■□□□□ 0.92
LINC01271-201ENST00000441214 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
LINC01271-201ENST00000441214 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
LINC01271-201ENST00000441214 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
LINC01271-201ENST00000441214 SLC24A1O60721 1099 aa20.77■□□□□ 0.92
LINC01271-201ENST00000441214 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms