RNA–Protein interactions for RNA: ENST00000428260.1

ZNF646-203, Transcript of zinc finger protein 646, humanhuman

TSL 3

Gene ZNF646, Length 1,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-203ENST00000428260 SHROOM2Q13796 1616 aa34.06■■■■□ 3.04
ZNF646-203ENST00000428260 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
ZNF646-203ENST00000428260 FAM9AQ8IZU1 332 aaPredicted RBP34.04■■■■□ 3.04
ZNF646-203ENST00000428260 CSRNP3Q8WYN3 585 aa33.97■■■■□ 3.03
ZNF646-203ENST00000428260 RAPGEF2Q9Y4G8 1499 aa33.91■■■■□ 3.02
ZNF646-203ENST00000428260 JPH4Q96JJ6 628 aa33.89■■■■□ 3.02
ZNF646-203ENST00000428260 PRG4Q92954 1404 aaPredicted RBP33.88■■■■□ 3.01
ZNF646-203ENST00000428260 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
ZNF646-203ENST00000428260 KIAA0586Q9BVV6 1533 aa33.84■■■■□ 3.01
ZNF646-203ENST00000428260 KIF21BO75037 1637 aa33.72■■■□□ 2.99
ZNF646-203ENST00000428260 TRHP20396 242 aaPredicted RBP33.67■■■□□ 2.98
ZNF646-203ENST00000428260 IQGAP2Q13576 1575 aa33.64■■■□□ 2.98
ZNF646-203ENST00000428260 CTTNBP2Q8WZ74 1663 aa33.61■■■□□ 2.97
ZNF646-203ENST00000428260 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
ZNF646-203ENST00000428260 GOLGA3Q08378 1498 aa33.57■■■□□ 2.97
ZNF646-203ENST00000428260 ADCY10Q96PN6 1610 aa33.46■■■□□ 2.95
ZNF646-203ENST00000428260 CARMIL2Q6F5E8 1435 aa33.46■■■□□ 2.95
ZNF646-203ENST00000428260 UBTFP17480 764 aaKnown RBP33.45■■■□□ 2.95
ZNF646-203ENST00000428260 DISP1Q96F81 1524 aa33.44■■■□□ 2.94
ZNF646-203ENST00000428260 UGGT2Q9NYU1 1516 aa33.43■■■□□ 2.94
ZNF646-203ENST00000428260 TTBK1Q5TCY1 1321 aaPredicted RBP33.42■■■□□ 2.94
ZNF646-203ENST00000428260 PTPRGP23470 1445 aa33.41■■■□□ 2.94
ZNF646-203ENST00000428260 TNIKQ9UKE5 1360 aa33.4■■■□□ 2.94
ZNF646-203ENST00000428260 KIAA0556O60303 1618 aa33.35■■■□□ 2.93
ZNF646-203ENST00000428260 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
ZNF646-203ENST00000428260 NPM1P06748 294 aaKnown RBP eCLIP33.27■■■□□ 2.92
ZNF646-203ENST00000428260 KIF13AQ9H1H9 1805 aa33.27■■■□□ 2.92
ZNF646-203ENST00000428260 MAPKBP1O60336 1514 aa33.24■■■□□ 2.91
ZNF646-203ENST00000428260 UACAQ9BZF9 1416 aa33.18■■■□□ 2.9
ZNF646-203ENST00000428260 SAMD9Q5K651 1589 aa33.17■■■□□ 2.9
ZNF646-203ENST00000428260 UHRF1BP1LA0JNW5 1464 aa33.17■■■□□ 2.9
ZNF646-203ENST00000428260 ABCC2Q92887 1545 aa33.17■■■□□ 2.9
ZNF646-203ENST00000428260 LOC105371045A0A1W2PR82 267 aa33.16■■■□□ 2.9
ZNF646-203ENST00000428260 EFCAB5A4FU69 1503 aa33.12■■■□□ 2.89
ZNF646-203ENST00000428260 ABCC10Q5T3U5 1492 aa33.12■■■□□ 2.89
ZNF646-203ENST00000428260 P3H3Q8IVL6 736 aa33.12■■■□□ 2.89
ZNF646-203ENST00000428260 DIP2BQ9P265 1576 aa33.11■■■□□ 2.89
ZNF646-203ENST00000428260 FAM69CQ0P6D2 419 aa33.07■■■□□ 2.88
ZNF646-203ENST00000428260 PLB1Q6P1J6 1458 aa33.05■■■□□ 2.88
ZNF646-203ENST00000428260 ZCCHC11Q5TAX3 1644 aaKnown RBP33.02■■■□□ 2.88
ZNF646-203ENST00000428260 KDM5BQ9UGL1 1544 aa33.02■■■□□ 2.88
ZNF646-203ENST00000428260 FHOD3Q2V2M9 1422 aa33.02■■■□□ 2.88
ZNF646-203ENST00000428260 ASXL2Q76L83 1435 aa33.01■■■□□ 2.87
ZNF646-203ENST00000428260 ARHGAP35Q9NRY4 1499 aa33■■■□□ 2.87
ZNF646-203ENST00000428260 ABCA8O94911 1581 aa32.99■■■□□ 2.87
ZNF646-203ENST00000428260 CLIP1P30622 1438 aa32.97■■■□□ 2.87
ZNF646-203ENST00000428260 CEP162Q5TB80 1403 aa32.94■■■□□ 2.86
ZNF646-203ENST00000428260 TSPOAP1O95153 1857 aa32.92■■■□□ 2.86
ZNF646-203ENST00000428260 GLI2P10070 1586 aa32.82■■■□□ 2.84
ZNF646-203ENST00000428260 EPRSP07814 1512 aaKnown RBP32.81■■■□□ 2.84
ZNF646-203ENST00000428260 FMN1Q68DA7 1419 aa32.8■■■□□ 2.84
ZNF646-203ENST00000428260 RAPGEF6Q8TEU7 1601 aa32.79■■■□□ 2.84
ZNF646-203ENST00000428260 ARID3CA6NKF2 412 aa32.77■■■□□ 2.84
ZNF646-203ENST00000428260 WDR7Q9Y4E6 1490 aa32.77■■■□□ 2.84
ZNF646-203ENST00000428260 PPRC1Q5VV67 1664 aaKnown RBP32.75■■■□□ 2.83
ZNF646-203ENST00000428260 MAP3K4Q9Y6R4 1608 aa32.72■■■□□ 2.83
ZNF646-203ENST00000428260 ATP10BO94823 1461 aa32.71■■■□□ 2.83
ZNF646-203ENST00000428260 KDM6BO15054 1643 aa32.66■■■□□ 2.82
ZNF646-203ENST00000428260 NUP153P49790 1475 aaKnown RBP32.65■■■□□ 2.82
ZNF646-203ENST00000428260 HECW1Q76N89 1606 aa32.64■■■□□ 2.82
ZNF646-203ENST00000428260 ATP1B4Q9UN42 357 aaPredicted RBP32.64■■■□□ 2.82
ZNF646-203ENST00000428260 PCF11O94913 1555 aaKnown RBP32.63■■■□□ 2.81
ZNF646-203ENST00000428260 KCNH8Q96L42 1107 aa32.63■■■□□ 2.81
ZNF646-203ENST00000428260 CASKIN1Q8WXD9 1431 aa32.58■■■□□ 2.81
ZNF646-203ENST00000428260 FYCO1Q9BQS8 1478 aa32.55■■■□□ 2.8
ZNF646-203ENST00000428260 CFAP43Q8NDM7 1665 aa32.55■■■□□ 2.8
ZNF646-203ENST00000428260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.54■■■□□ 2.8
ZNF646-203ENST00000428260 HNRNPUL2Q1KMD3 747 aaKnown RBP32.54■■■□□ 2.8
ZNF646-203ENST00000428260 TEX14Q8IWB6 1497 aa32.5■■■□□ 2.79
ZNF646-203ENST00000428260 CDK13Q14004 1512 aaKnown RBP32.5■■■□□ 2.79
ZNF646-203ENST00000428260 CD109Q6YHK3 1445 aa32.5■■■□□ 2.79
ZNF646-203ENST00000428260 VPS8Q8N3P4 1428 aa32.5■■■□□ 2.79
ZNF646-203ENST00000428260 LRRIQ1Q96JM4 1722 aa32.46■■■□□ 2.79
ZNF646-203ENST00000428260 COL17A1Q9UMD9 1497 aaPredicted RBP32.45■■■□□ 2.79
ZNF646-203ENST00000428260 MAGI3Q5TCQ9 1506 aa32.44■■■□□ 2.78
ZNF646-203ENST00000428260 CCDC18Q5T9S5 1454 aa32.43■■■□□ 2.78
ZNF646-203ENST00000428260 ABCA9Q8IUA7 1624 aa32.42■■■□□ 2.78
ZNF646-203ENST00000428260 PLEKHD1A6NEE1 506 aa32.34■■■□□ 2.77
ZNF646-203ENST00000428260 CDK11AQ9UQ88 783 aaPredicted RBP32.32■■■□□ 2.76
ZNF646-203ENST00000428260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.24■■■□□ 2.75
ZNF646-203ENST00000428260 TTC37Q6PGP7 1564 aa32.22■■■□□ 2.75
ZNF646-203ENST00000428260 TROQ12816 1431 aaPredicted RBP32.21■■■□□ 2.75
ZNF646-203ENST00000428260 TIAM1Q13009 1591 aa32.2■■■□□ 2.75
ZNF646-203ENST00000428260 ARAP3Q8WWN8 1544 aa32.17■■■□□ 2.74
ZNF646-203ENST00000428260 AEBP2Q6ZN18 517 aaPredicted RBP32.16■■■□□ 2.74
ZNF646-203ENST00000428260 KIF14Q15058 1648 aa32.15■■■□□ 2.74
ZNF646-203ENST00000428260 APLP2Q06481 763 aa32.15■■■□□ 2.74
ZNF646-203ENST00000428260 MTUS2Q5JR59 1369 aa32.15■■■□□ 2.74
ZNF646-203ENST00000428260 NEO1Q92859 1461 aa32.14■■■□□ 2.74
ZNF646-203ENST00000428260 MAP3K1Q13233 1512 aa32.12■■■□□ 2.73
ZNF646-203ENST00000428260 EHBP1L1Q8N3D4 1523 aa32.11■■■□□ 2.73
ZNF646-203ENST00000428260 PHLDB1Q86UU1 1377 aa32.09■■■□□ 2.73
ZNF646-203ENST00000428260 KDM4FA0A1W2PPD8 638 aa32.06■■■□□ 2.72
ZNF646-203ENST00000428260 FANCAO15360 1455 aa32.05■■■□□ 2.72
ZNF646-203ENST00000428260 LRRC9Q6ZRR7 1453 aa32.03■■■□□ 2.72
ZNF646-203ENST00000428260 CFAP74Q9C0B2 1584 aa32.03■■■□□ 2.72
ZNF646-203ENST00000428260 RAPGEF3O95398 923 aa32.03■■■□□ 2.72
ZNF646-203ENST00000428260 FRMPD1Q5SYB0 1578 aa32.02■■■□□ 2.72
ZNF646-203ENST00000428260 MYO5CQ9NQX4 1742 aa32.01■■■□□ 2.72
ZNF646-203ENST00000428260 AKNAQ7Z591 1439 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms