RNA–Protein interactions for RNA: ENST00000428260.1

ZNF646-203, Transcript of zinc finger protein 646, humanhuman

TSL 3

Gene ZNF646, Length 1,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-203ENST00000428260 NISCHQ9Y2I1 1504 aa48.85■■■■■ 5.41
ZNF646-203ENST00000428260 CCDC180Q9P1Z9 1646 aa43.55■■■■■ 4.56
ZNF646-203ENST00000428260 ABCC9O60706 1549 aa42.95■■■■■ 4.47
ZNF646-203ENST00000428260 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
ZNF646-203ENST00000428260 NACADO15069 1562 aa40.99■■■■■ 4.15
ZNF646-203ENST00000428260 DCAF8L2P0C7V8 631 aa40.96■■■■■ 4.15
ZNF646-203ENST00000428260 ZCCHC6Q5VYS8 1495 aaKnown RBP40.76■■■■■ 4.12
ZNF646-203ENST00000428260 MYO15BQ96JP2 1530 aa40.6■■■■■ 4.09
ZNF646-203ENST00000428260 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
ZNF646-203ENST00000428260 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
ZNF646-203ENST00000428260 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
ZNF646-203ENST00000428260 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
ZNF646-203ENST00000428260 SCRIBQ14160 1630 aa39.8■■■■□ 3.96
ZNF646-203ENST00000428260 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
ZNF646-203ENST00000428260 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
ZNF646-203ENST00000428260 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
ZNF646-203ENST00000428260 CC2D2AQ9P2K1 1620 aa38.84■■■■□ 3.81
ZNF646-203ENST00000428260 CECR2Q9BXF3 1484 aa38.58■■■■□ 3.77
ZNF646-203ENST00000428260 SMARCA4P51532 1647 aa38■■■■□ 3.67
ZNF646-203ENST00000428260 BAZ1AQ9NRL2 1556 aaPredicted RBP37.86■■■■□ 3.65
ZNF646-203ENST00000428260 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
ZNF646-203ENST00000428260 NCAPD3P42695 1498 aa37.82■■■■□ 3.64
ZNF646-203ENST00000428260 SMARCA2P51531 1590 aa37.74■■■■□ 3.63
ZNF646-203ENST00000428260 MROH2BQ7Z745 1585 aa37.69■■■■□ 3.62
ZNF646-203ENST00000428260 HMGXB3Q12766 1538 aa37.62■■■■□ 3.61
ZNF646-203ENST00000428260 PEG3Q9GZU2 1588 aa37.58■■■■□ 3.61
ZNF646-203ENST00000428260 BAZ1BQ9UIG0 1483 aaKnown RBP37.51■■■■□ 3.59
ZNF646-203ENST00000428260 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
ZNF646-203ENST00000428260 WIZO95785 1651 aa37.31■■■■□ 3.56
ZNF646-203ENST00000428260 NESP48681 1621 aa37.11■■■■□ 3.53
ZNF646-203ENST00000428260 ERCC6Q03468 1493 aa37■■■■□ 3.51
ZNF646-203ENST00000428260 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
ZNF646-203ENST00000428260 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
ZNF646-203ENST00000428260 SUPT5HO00267 1087 aaKnown RBP36.8■■■■□ 3.48
ZNF646-203ENST00000428260 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
ZNF646-203ENST00000428260 CUX2O14529 1486 aa36.68■■■■□ 3.46
ZNF646-203ENST00000428260 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
ZNF646-203ENST00000428260 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
ZNF646-203ENST00000428260 THOC2Q8NI27 1593 aaKnown RBP36.59■■■■□ 3.45
ZNF646-203ENST00000428260 CCDC88BA6NC98 1476 aa36.44■■■■□ 3.42
ZNF646-203ENST00000428260 CFTRP13569 1480 aa36.44■■■■□ 3.42
ZNF646-203ENST00000428260 FANCD2Q9BXW9 1451 aa36.32■■■■□ 3.41
ZNF646-203ENST00000428260 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
ZNF646-203ENST00000428260 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
ZNF646-203ENST00000428260 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
ZNF646-203ENST00000428260 WDR62O43379 1518 aa36.2■■■■□ 3.39
ZNF646-203ENST00000428260 URB2Q14146 1524 aaKnown RBP36.01■■■■□ 3.36
ZNF646-203ENST00000428260 DNAJC5Q9H3Z4 198 aa35.99■■■■□ 3.35
ZNF646-203ENST00000428260 TOPBP1Q92547 1522 aa35.72■■■■□ 3.31
ZNF646-203ENST00000428260 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
ZNF646-203ENST00000428260 ABCC8Q09428 1581 aa35.61■■■■□ 3.29
ZNF646-203ENST00000428260 IFT140Q96RY7 1462 aa35.52■■■■□ 3.28
ZNF646-203ENST00000428260 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
ZNF646-203ENST00000428260 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
ZNF646-203ENST00000428260 TARBP1Q13395 1621 aaKnown RBP35.38■■■■□ 3.25
ZNF646-203ENST00000428260 CUX1P39880 1505 aa35.37■■■■□ 3.25
ZNF646-203ENST00000428260 EIF4G3O43432 1585 aaKnown RBP35.31■■■■□ 3.24
ZNF646-203ENST00000428260 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
ZNF646-203ENST00000428260 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
ZNF646-203ENST00000428260 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
ZNF646-203ENST00000428260 SOGA1O94964 1423 aa35.22■■■■□ 3.23
ZNF646-203ENST00000428260 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.23
ZNF646-203ENST00000428260 SYNJ1O43426 1573 aa35.13■■■■□ 3.21
ZNF646-203ENST00000428260 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
ZNF646-203ENST00000428260 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
ZNF646-203ENST00000428260 OSCARQ8IYS5 282 aa35.1■■■■□ 3.21
ZNF646-203ENST00000428260 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
ZNF646-203ENST00000428260 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
ZNF646-203ENST00000428260 CHD1O14646 1710 aa34.96■■■■□ 3.19
ZNF646-203ENST00000428260 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
ZNF646-203ENST00000428260 SNAPC4Q5SXM2 1469 aa34.88■■■■□ 3.17
ZNF646-203ENST00000428260 GRIN2BQ13224 1484 aa34.84■■■■□ 3.17
ZNF646-203ENST00000428260 PBRM1Q86U86 1689 aa34.83■■■■□ 3.17
ZNF646-203ENST00000428260 FBLN2P98095 1184 aa34.83■■■■□ 3.17
ZNF646-203ENST00000428260 ABCA5Q8WWZ7 1642 aa34.82■■■■□ 3.16
ZNF646-203ENST00000428260 GAPVD1Q14C86 1478 aa34.82■■■■□ 3.16
ZNF646-203ENST00000428260 MAGI1Q96QZ7 1491 aaPredicted RBP34.77■■■■□ 3.16
ZNF646-203ENST00000428260 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
ZNF646-203ENST00000428260 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
ZNF646-203ENST00000428260 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
ZNF646-203ENST00000428260 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
ZNF646-203ENST00000428260 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
ZNF646-203ENST00000428260 CHMP7Q8WUX9 453 aaPredicted RBP34.64■■■■□ 3.14
ZNF646-203ENST00000428260 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
ZNF646-203ENST00000428260 CHIC1Q5VXU3 224 aa34.55■■■■□ 3.12
ZNF646-203ENST00000428260 CLASP1Q7Z460 1538 aa34.52■■■■□ 3.12
ZNF646-203ENST00000428260 ADAMTS12P58397 1594 aa34.51■■■■□ 3.12
ZNF646-203ENST00000428260 KIF27Q86VH2 1401 aa34.47■■■■□ 3.11
ZNF646-203ENST00000428260 ERICH3Q5RHP9 1530 aa34.45■■■■□ 3.11
ZNF646-203ENST00000428260 GRIN2AQ12879 1464 aa34.41■■■■□ 3.1
ZNF646-203ENST00000428260 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
ZNF646-203ENST00000428260 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
ZNF646-203ENST00000428260 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
ZNF646-203ENST00000428260 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
ZNF646-203ENST00000428260 CYB5RLQ6IPT4 315 aa34.27■■■■□ 3.08
ZNF646-203ENST00000428260 NUP160Q12769 1436 aa34.26■■■■□ 3.07
ZNF646-203ENST00000428260 IGF1RP08069 1367 aa34.22■■■■□ 3.07
ZNF646-203ENST00000428260 CUL7Q14999 1698 aa34.17■■■■□ 3.06
ZNF646-203ENST00000428260 EEA1Q15075 1411 aa34.09■■■■□ 3.05
ZNF646-203ENST00000428260 ERCC6L2Q5T890 1561 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms