RNA–Protein interactions for RNA: ENST00000426572.5

ZKSCAN1-202, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-202ENST00000426572 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.88
ZKSCAN1-202ENST00000426572 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
ZKSCAN1-202ENST00000426572 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
ZKSCAN1-202ENST00000426572 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
ZKSCAN1-202ENST00000426572 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
ZKSCAN1-202ENST00000426572 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
ZKSCAN1-202ENST00000426572 EFCAB5A4FU69 1503 aa20.39■□□□□ 0.86
ZKSCAN1-202ENST00000426572 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
ZKSCAN1-202ENST00000426572 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
ZKSCAN1-202ENST00000426572 IQGAP2Q13576 1575 aa20.35■□□□□ 0.85
ZKSCAN1-202ENST00000426572 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
ZKSCAN1-202ENST00000426572 SAMD9Q5K651 1589 aa20.32■□□□□ 0.84
ZKSCAN1-202ENST00000426572 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
ZKSCAN1-202ENST00000426572 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
ZKSCAN1-202ENST00000426572 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
ZKSCAN1-202ENST00000426572 FBLN2P98095 1184 aa20.28■□□□□ 0.84
ZKSCAN1-202ENST00000426572 APLP2Q06481 763 aa20.28■□□□□ 0.84
ZKSCAN1-202ENST00000426572 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
ZKSCAN1-202ENST00000426572 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
ZKSCAN1-202ENST00000426572 NUP160Q12769 1436 aa20.24■□□□□ 0.83
ZKSCAN1-202ENST00000426572 UGGT2Q9NYU1 1516 aa20.24■□□□□ 0.83
ZKSCAN1-202ENST00000426572 PCF11O94913 1555 aaKnown RBP20.23■□□□□ 0.83
ZKSCAN1-202ENST00000426572 FMN1Q68DA7 1419 aa20.21■□□□□ 0.83
ZKSCAN1-202ENST00000426572 CHD1O14646 1710 aa20.18■□□□□ 0.82
ZKSCAN1-202ENST00000426572 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
ZKSCAN1-202ENST00000426572 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
ZKSCAN1-202ENST00000426572 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
ZKSCAN1-202ENST00000426572 DISP1Q96F81 1524 aa20.14■□□□□ 0.81
ZKSCAN1-202ENST00000426572 TIAM1Q13009 1591 aa20.14■□□□□ 0.81
ZKSCAN1-202ENST00000426572 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
ZKSCAN1-202ENST00000426572 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
ZKSCAN1-202ENST00000426572 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
ZKSCAN1-202ENST00000426572 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
ZKSCAN1-202ENST00000426572 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
ZKSCAN1-202ENST00000426572 LRRC9Q6ZRR7 1453 aa20.04■□□□□ 0.8
ZKSCAN1-202ENST00000426572 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
ZKSCAN1-202ENST00000426572 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
ZKSCAN1-202ENST00000426572 HECW1Q76N89 1606 aa20.01■□□□□ 0.79
ZKSCAN1-202ENST00000426572 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
ZKSCAN1-202ENST00000426572 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
ZKSCAN1-202ENST00000426572 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
ZKSCAN1-202ENST00000426572 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
ZKSCAN1-202ENST00000426572 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
ZKSCAN1-202ENST00000426572 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
ZKSCAN1-202ENST00000426572 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
ZKSCAN1-202ENST00000426572 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
ZKSCAN1-202ENST00000426572 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
ZKSCAN1-202ENST00000426572 RRBP1Q9P2E9 1410 aaKnown RBP19.9■□□□□ 0.78
ZKSCAN1-202ENST00000426572 PLB1Q6P1J6 1458 aa19.89■□□□□ 0.78
ZKSCAN1-202ENST00000426572 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
ZKSCAN1-202ENST00000426572 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
ZKSCAN1-202ENST00000426572 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
ZKSCAN1-202ENST00000426572 ARID3CA6NKF2 412 aa19.85■□□□□ 0.77
ZKSCAN1-202ENST00000426572 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
ZKSCAN1-202ENST00000426572 ABCA8O94911 1581 aa19.83■□□□□ 0.77
ZKSCAN1-202ENST00000426572 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.77
ZKSCAN1-202ENST00000426572 PTPRGP23470 1445 aa19.82■□□□□ 0.76
ZKSCAN1-202ENST00000426572 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
ZKSCAN1-202ENST00000426572 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
ZKSCAN1-202ENST00000426572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
ZKSCAN1-202ENST00000426572 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
ZKSCAN1-202ENST00000426572 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
ZKSCAN1-202ENST00000426572 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
ZKSCAN1-202ENST00000426572 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
ZKSCAN1-202ENST00000426572 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
ZKSCAN1-202ENST00000426572 MYOM3Q5VTT5 1437 aa19.71■□□□□ 0.75
ZKSCAN1-202ENST00000426572 UACAQ9BZF9 1416 aa19.71■□□□□ 0.75
ZKSCAN1-202ENST00000426572 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
ZKSCAN1-202ENST00000426572 ATP10BO94823 1461 aa19.7■□□□□ 0.74
ZKSCAN1-202ENST00000426572 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
ZKSCAN1-202ENST00000426572 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
ZKSCAN1-202ENST00000426572 ABCC2Q92887 1545 aa19.67■□□□□ 0.74
ZKSCAN1-202ENST00000426572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.66■□□□□ 0.74
ZKSCAN1-202ENST00000426572 ITGAEP38570 1179 aa19.64■□□□□ 0.73
ZKSCAN1-202ENST00000426572 ADCY10Q96PN6 1610 aa19.64■□□□□ 0.73
ZKSCAN1-202ENST00000426572 KIF14Q15058 1648 aa19.62■□□□□ 0.73
ZKSCAN1-202ENST00000426572 PTPN23Q9H3S7 1636 aa19.61■□□□□ 0.73
ZKSCAN1-202ENST00000426572 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
ZKSCAN1-202ENST00000426572 UHRF1BP1LA0JNW5 1464 aa19.59■□□□□ 0.73
ZKSCAN1-202ENST00000426572 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
ZKSCAN1-202ENST00000426572 TCOF1Q13428 1488 aaKnown RBP19.57■□□□□ 0.72
ZKSCAN1-202ENST00000426572 ITSN2Q9NZM3 1697 aa19.54■□□□□ 0.72
ZKSCAN1-202ENST00000426572 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
ZKSCAN1-202ENST00000426572 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
ZKSCAN1-202ENST00000426572 ABCC10Q5T3U5 1492 aa19.52■□□□□ 0.71
ZKSCAN1-202ENST00000426572 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
ZKSCAN1-202ENST00000426572 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
ZKSCAN1-202ENST00000426572 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
ZKSCAN1-202ENST00000426572 RAB3GAP2Q9H2M9 1393 aa19.46■□□□□ 0.71
ZKSCAN1-202ENST00000426572 SETD5Q9C0A6 1442 aa19.46■□□□□ 0.71
ZKSCAN1-202ENST00000426572 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
ZKSCAN1-202ENST00000426572 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
ZKSCAN1-202ENST00000426572 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
ZKSCAN1-202ENST00000426572 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
ZKSCAN1-202ENST00000426572 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
ZKSCAN1-202ENST00000426572 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
ZKSCAN1-202ENST00000426572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
ZKSCAN1-202ENST00000426572 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
ZKSCAN1-202ENST00000426572 PREX2Q70Z35 1606 aa19.41■□□□□ 0.7
ZKSCAN1-202ENST00000426572 DAPK1P53355 1430 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms