RNA–Protein interactions for RNA: ENST00000426572.5

ZKSCAN1-202, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-202ENST00000426572 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
ZKSCAN1-202ENST00000426572 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
ZKSCAN1-202ENST00000426572 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
ZKSCAN1-202ENST00000426572 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
ZKSCAN1-202ENST00000426572 ABCC9O60706 1549 aa24.49■■□□□ 1.51
ZKSCAN1-202ENST00000426572 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
ZKSCAN1-202ENST00000426572 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
ZKSCAN1-202ENST00000426572 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
ZKSCAN1-202ENST00000426572 NACADO15069 1562 aa24.08■■□□□ 1.45
ZKSCAN1-202ENST00000426572 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
ZKSCAN1-202ENST00000426572 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
ZKSCAN1-202ENST00000426572 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
ZKSCAN1-202ENST00000426572 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
ZKSCAN1-202ENST00000426572 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
ZKSCAN1-202ENST00000426572 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.28
ZKSCAN1-202ENST00000426572 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
ZKSCAN1-202ENST00000426572 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
ZKSCAN1-202ENST00000426572 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
ZKSCAN1-202ENST00000426572 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
ZKSCAN1-202ENST00000426572 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
ZKSCAN1-202ENST00000426572 WIZO95785 1651 aa22.73■■□□□ 1.23
ZKSCAN1-202ENST00000426572 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
ZKSCAN1-202ENST00000426572 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
ZKSCAN1-202ENST00000426572 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
ZKSCAN1-202ENST00000426572 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
ZKSCAN1-202ENST00000426572 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
ZKSCAN1-202ENST00000426572 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
ZKSCAN1-202ENST00000426572 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
ZKSCAN1-202ENST00000426572 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
ZKSCAN1-202ENST00000426572 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
ZKSCAN1-202ENST00000426572 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
ZKSCAN1-202ENST00000426572 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
ZKSCAN1-202ENST00000426572 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
ZKSCAN1-202ENST00000426572 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
ZKSCAN1-202ENST00000426572 CFTRP13569 1480 aa21.74■■□□□ 1.07
ZKSCAN1-202ENST00000426572 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
ZKSCAN1-202ENST00000426572 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
ZKSCAN1-202ENST00000426572 PRDM2Q13029 1718 aa21.64■■□□□ 1.05
ZKSCAN1-202ENST00000426572 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
ZKSCAN1-202ENST00000426572 SYNJ1O43426 1573 aa21.58■■□□□ 1.04
ZKSCAN1-202ENST00000426572 NESP48681 1621 aa21.5■■□□□ 1.03
ZKSCAN1-202ENST00000426572 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
ZKSCAN1-202ENST00000426572 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
ZKSCAN1-202ENST00000426572 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
ZKSCAN1-202ENST00000426572 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
ZKSCAN1-202ENST00000426572 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
ZKSCAN1-202ENST00000426572 CUX1P39880 1505 aa21.43■■□□□ 1.02
ZKSCAN1-202ENST00000426572 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
ZKSCAN1-202ENST00000426572 SOGA1O94964 1423 aa21.37■■□□□ 1.01
ZKSCAN1-202ENST00000426572 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
ZKSCAN1-202ENST00000426572 EEA1Q15075 1411 aa21.31■■□□□ 1
ZKSCAN1-202ENST00000426572 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
ZKSCAN1-202ENST00000426572 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
ZKSCAN1-202ENST00000426572 KIF21AQ7Z4S6 1674 aa21.25■□□□□ 0.99
ZKSCAN1-202ENST00000426572 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
ZKSCAN1-202ENST00000426572 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
ZKSCAN1-202ENST00000426572 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
ZKSCAN1-202ENST00000426572 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
ZKSCAN1-202ENST00000426572 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
ZKSCAN1-202ENST00000426572 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
ZKSCAN1-202ENST00000426572 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
ZKSCAN1-202ENST00000426572 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
ZKSCAN1-202ENST00000426572 KIF21BO75037 1637 aa21.06■□□□□ 0.96
ZKSCAN1-202ENST00000426572 CUX2O14529 1486 aa21.06■□□□□ 0.96
ZKSCAN1-202ENST00000426572 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
ZKSCAN1-202ENST00000426572 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
ZKSCAN1-202ENST00000426572 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
ZKSCAN1-202ENST00000426572 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
ZKSCAN1-202ENST00000426572 ERCC6Q03468 1493 aa21■□□□□ 0.95
ZKSCAN1-202ENST00000426572 HRCP23327 699 aa20.99■□□□□ 0.95
ZKSCAN1-202ENST00000426572 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
ZKSCAN1-202ENST00000426572 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
ZKSCAN1-202ENST00000426572 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
ZKSCAN1-202ENST00000426572 WDR62O43379 1518 aa20.95■□□□□ 0.94
ZKSCAN1-202ENST00000426572 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
ZKSCAN1-202ENST00000426572 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
ZKSCAN1-202ENST00000426572 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
ZKSCAN1-202ENST00000426572 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
ZKSCAN1-202ENST00000426572 THOC2Q8NI27 1593 aaKnown RBP20.9■□□□□ 0.94
ZKSCAN1-202ENST00000426572 IGF1RP08069 1367 aa20.9■□□□□ 0.94
ZKSCAN1-202ENST00000426572 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
ZKSCAN1-202ENST00000426572 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
ZKSCAN1-202ENST00000426572 ABCA5Q8WWZ7 1642 aa20.85■□□□□ 0.93
ZKSCAN1-202ENST00000426572 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
ZKSCAN1-202ENST00000426572 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
ZKSCAN1-202ENST00000426572 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
ZKSCAN1-202ENST00000426572 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
ZKSCAN1-202ENST00000426572 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
ZKSCAN1-202ENST00000426572 CUL7Q14999 1698 aa20.77■□□□□ 0.91
ZKSCAN1-202ENST00000426572 CLIP1P30622 1438 aa20.7■□□□□ 0.9
ZKSCAN1-202ENST00000426572 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.94e-7■■■■■ 45.3
ZKSCAN1-202ENST00000426572 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
ZKSCAN1-202ENST00000426572 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
ZKSCAN1-202ENST00000426572 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.89
ZKSCAN1-202ENST00000426572 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
ZKSCAN1-202ENST00000426572 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
ZKSCAN1-202ENST00000426572 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
ZKSCAN1-202ENST00000426572 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
ZKSCAN1-202ENST00000426572 CTTNBP2Q8WZ74 1663 aa20.54■□□□□ 0.88
ZKSCAN1-202ENST00000426572 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms