RNA–Protein interactions for RNA: ENST00000425497.5

SMIM25-203, Transcript of small integral membrane protein 25, humanhuman

TSL 1 (best) BASIC

Gene SMIM25, Length 2,010 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM25-203ENST00000425497 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
SMIM25-203ENST00000425497 PRKCSHP14314 528 aaPredicted RBP25.35■■□□□ 1.65
SMIM25-203ENST00000425497 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
SMIM25-203ENST00000425497 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
SMIM25-203ENST00000425497 CLIP1P30622 1438 aa25.23■■□□□ 1.63
SMIM25-203ENST00000425497 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.62
SMIM25-203ENST00000425497 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
SMIM25-203ENST00000425497 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
SMIM25-203ENST00000425497 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
SMIM25-203ENST00000425497 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
SMIM25-203ENST00000425497 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
SMIM25-203ENST00000425497 CTTNBP2Q8WZ74 1663 aa25.1■■□□□ 1.61
SMIM25-203ENST00000425497 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
SMIM25-203ENST00000425497 RANGAP1P46060 587 aaPredicted RBP25.03■■□□□ 1.6
SMIM25-203ENST00000425497 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
SMIM25-203ENST00000425497 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
SMIM25-203ENST00000425497 ERICH6Q7L0X2 663 aa25■■□□□ 1.59
SMIM25-203ENST00000425497 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
SMIM25-203ENST00000425497 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
SMIM25-203ENST00000425497 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
SMIM25-203ENST00000425497 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
SMIM25-203ENST00000425497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
SMIM25-203ENST00000425497 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
SMIM25-203ENST00000425497 TSHZ2Q9NRE2 1034 aa24.93■■□□□ 1.58
SMIM25-203ENST00000425497 EFCAB5A4FU69 1503 aa24.93■■□□□ 1.58
SMIM25-203ENST00000425497 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
SMIM25-203ENST00000425497 GRIN2AQ12879 1464 aa24.88■■□□□ 1.57
SMIM25-203ENST00000425497 IQGAP2Q13576 1575 aa24.84■■□□□ 1.57
SMIM25-203ENST00000425497 APLP2Q06481 763 aa24.83■■□□□ 1.57
SMIM25-203ENST00000425497 SUPT16HQ9Y5B9 1047 aaKnown RBP24.81■■□□□ 1.56
SMIM25-203ENST00000425497 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
SMIM25-203ENST00000425497 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
SMIM25-203ENST00000425497 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
SMIM25-203ENST00000425497 KIAA0586Q9BVV6 1533 aa24.76■■□□□ 1.55
SMIM25-203ENST00000425497 MIER1Q8N108 512 aa24.74■■□□□ 1.55
SMIM25-203ENST00000425497 FHOD3Q2V2M9 1422 aa24.73■■□□□ 1.55
SMIM25-203ENST00000425497 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
SMIM25-203ENST00000425497 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
SMIM25-203ENST00000425497 NUP160Q12769 1436 aa24.69■■□□□ 1.54
SMIM25-203ENST00000425497 FBLN2P98095 1184 aa24.69■■□□□ 1.54
SMIM25-203ENST00000425497 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
SMIM25-203ENST00000425497 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
SMIM25-203ENST00000425497 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
SMIM25-203ENST00000425497 CHD1O14646 1710 aa24.63■■□□□ 1.53
SMIM25-203ENST00000425497 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
SMIM25-203ENST00000425497 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
SMIM25-203ENST00000425497 CASKIN1Q8WXD9 1431 aa24.61■■□□□ 1.53
SMIM25-203ENST00000425497 KIAA0556O60303 1618 aa24.58■■□□□ 1.52
SMIM25-203ENST00000425497 TIAM1Q13009 1591 aa24.57■■□□□ 1.52
SMIM25-203ENST00000425497 CFAP43Q8NDM7 1665 aa24.56■■□□□ 1.52
SMIM25-203ENST00000425497 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
SMIM25-203ENST00000425497 CARMIL2Q6F5E8 1435 aa24.48■■□□□ 1.51
SMIM25-203ENST00000425497 JPH4Q96JJ6 628 aa24.46■■□□□ 1.51
SMIM25-203ENST00000425497 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.51
SMIM25-203ENST00000425497 ATP1B4Q9UN42 357 aaPredicted RBP24.45■■□□□ 1.51
SMIM25-203ENST00000425497 HECW1Q76N89 1606 aa24.45■■□□□ 1.5
SMIM25-203ENST00000425497 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
SMIM25-203ENST00000425497 LRRIQ1Q96JM4 1722 aa24.4■■□□□ 1.5
SMIM25-203ENST00000425497 CCDC18Q5T9S5 1454 aa24.4■■□□□ 1.5
SMIM25-203ENST00000425497 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
SMIM25-203ENST00000425497 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
SMIM25-203ENST00000425497 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
SMIM25-203ENST00000425497 PRG4Q92954 1404 aaPredicted RBP24.33■■□□□ 1.48
SMIM25-203ENST00000425497 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
SMIM25-203ENST00000425497 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
SMIM25-203ENST00000425497 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
SMIM25-203ENST00000425497 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
SMIM25-203ENST00000425497 RRBP1Q9P2E9 1410 aaKnown RBP24.26■■□□□ 1.47
SMIM25-203ENST00000425497 NUP153P49790 1475 aaKnown RBP24.24■■□□□ 1.47
SMIM25-203ENST00000425497 RBM19Q9Y4C8 960 aaKnown RBP24.23■■□□□ 1.47
SMIM25-203ENST00000425497 ABCA8O94911 1581 aa24.22■■□□□ 1.47
SMIM25-203ENST00000425497 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
SMIM25-203ENST00000425497 SUPT6HQ7KZ85 1726 aaKnown RBP24.21■■□□□ 1.47
SMIM25-203ENST00000425497 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
SMIM25-203ENST00000425497 PTPRGP23470 1445 aa24.18■■□□□ 1.46
SMIM25-203ENST00000425497 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
SMIM25-203ENST00000425497 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
SMIM25-203ENST00000425497 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
SMIM25-203ENST00000425497 ERCC6L2Q5T890 1561 aa24.13■■□□□ 1.45
SMIM25-203ENST00000425497 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
SMIM25-203ENST00000425497 MSH5O43196 834 aa24.11■■□□□ 1.45
SMIM25-203ENST00000425497 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
SMIM25-203ENST00000425497 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
SMIM25-203ENST00000425497 ARID3CA6NKF2 412 aa24.08■■□□□ 1.45
SMIM25-203ENST00000425497 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
SMIM25-203ENST00000425497 FANCIQ9NVI1 1328 aa24.07■■□□□ 1.44
SMIM25-203ENST00000425497 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
SMIM25-203ENST00000425497 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
SMIM25-203ENST00000425497 MYOM3Q5VTT5 1437 aa24.04■■□□□ 1.44
SMIM25-203ENST00000425497 FGD6Q6ZV73 1430 aa24.04■■□□□ 1.44
SMIM25-203ENST00000425497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMIM25-203ENST00000425497 TROQ12816 1431 aaPredicted RBP24.03■■□□□ 1.44
SMIM25-203ENST00000425497 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
SMIM25-203ENST00000425497 ATP10BO94823 1461 aa24.01■■□□□ 1.43
SMIM25-203ENST00000425497 ADCY10Q96PN6 1610 aa24■■□□□ 1.43
SMIM25-203ENST00000425497 ERICH6BQ5W0A0 696 aa23.99■■□□□ 1.43
SMIM25-203ENST00000425497 ANO8Q9HCE9 1232 aaPredicted RBP23.98■■□□□ 1.43
SMIM25-203ENST00000425497 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
SMIM25-203ENST00000425497 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
SMIM25-203ENST00000425497 PTPN23Q9H3S7 1636 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms