RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 EFCAB5A4FU69 1503 aa21.08■□□□□ 0.96
TMEM50B-201ENST00000420455 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
TMEM50B-201ENST00000420455 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
TMEM50B-201ENST00000420455 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
TMEM50B-201ENST00000420455 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
TMEM50B-201ENST00000420455 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
TMEM50B-201ENST00000420455 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
TMEM50B-201ENST00000420455 MAP3K1Q13233 1512 aa20.92■□□□□ 0.94
TMEM50B-201ENST00000420455 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
TMEM50B-201ENST00000420455 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
TMEM50B-201ENST00000420455 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
TMEM50B-201ENST00000420455 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
TMEM50B-201ENST00000420455 NUP160Q12769 1436 aa20.87■□□□□ 0.93
TMEM50B-201ENST00000420455 HRCP23327 699 aa20.86■□□□□ 0.93
TMEM50B-201ENST00000420455 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.93
TMEM50B-201ENST00000420455 FHOD3Q2V2M9 1422 aa20.83■□□□□ 0.93
TMEM50B-201ENST00000420455 FYCO1Q9BQS8 1478 aa20.82■□□□□ 0.92
TMEM50B-201ENST00000420455 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
TMEM50B-201ENST00000420455 PPARGC1BQ86YN6 1023 aaKnown RBP20.81■□□□□ 0.92
TMEM50B-201ENST00000420455 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
TMEM50B-201ENST00000420455 FMN1Q68DA7 1419 aa20.81■□□□□ 0.92
TMEM50B-201ENST00000420455 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
TMEM50B-201ENST00000420455 DISP1Q96F81 1524 aa20.77■□□□□ 0.92
TMEM50B-201ENST00000420455 KIAA0556O60303 1618 aa20.76■□□□□ 0.91
TMEM50B-201ENST00000420455 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
TMEM50B-201ENST00000420455 CHD1O14646 1710 aa20.75■□□□□ 0.91
TMEM50B-201ENST00000420455 LRRIQ1Q96JM4 1722 aa20.72■□□□□ 0.91
TMEM50B-201ENST00000420455 APLP2Q06481 763 aa20.72■□□□□ 0.91
TMEM50B-201ENST00000420455 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
TMEM50B-201ENST00000420455 LRRC9Q6ZRR7 1453 aa20.68■□□□□ 0.9
TMEM50B-201ENST00000420455 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
TMEM50B-201ENST00000420455 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
TMEM50B-201ENST00000420455 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
TMEM50B-201ENST00000420455 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
TMEM50B-201ENST00000420455 RRBP1Q9P2E9 1410 aaKnown RBP20.59■□□□□ 0.89
TMEM50B-201ENST00000420455 FBLN2P98095 1184 aa20.58■□□□□ 0.88
TMEM50B-201ENST00000420455 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
TMEM50B-201ENST00000420455 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
TMEM50B-201ENST00000420455 CARMIL2Q6F5E8 1435 aa20.56■□□□□ 0.88
TMEM50B-201ENST00000420455 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
TMEM50B-201ENST00000420455 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
TMEM50B-201ENST00000420455 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
TMEM50B-201ENST00000420455 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
TMEM50B-201ENST00000420455 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
TMEM50B-201ENST00000420455 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
TMEM50B-201ENST00000420455 ABCA8O94911 1581 aa20.49■□□□□ 0.87
TMEM50B-201ENST00000420455 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
TMEM50B-201ENST00000420455 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
TMEM50B-201ENST00000420455 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
TMEM50B-201ENST00000420455 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
TMEM50B-201ENST00000420455 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
TMEM50B-201ENST00000420455 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
TMEM50B-201ENST00000420455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
TMEM50B-201ENST00000420455 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
TMEM50B-201ENST00000420455 ATP1B4Q9UN42 357 aaPredicted RBP20.38■□□□□ 0.85
TMEM50B-201ENST00000420455 MTUS2Q5JR59 1369 aa20.38■□□□□ 0.85
TMEM50B-201ENST00000420455 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
TMEM50B-201ENST00000420455 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
TMEM50B-201ENST00000420455 ADCY10Q96PN6 1610 aa20.35■□□□□ 0.85
TMEM50B-201ENST00000420455 PTPRGP23470 1445 aa20.32■□□□□ 0.84
TMEM50B-201ENST00000420455 MYOM3Q5VTT5 1437 aa20.32■□□□□ 0.84
TMEM50B-201ENST00000420455 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
TMEM50B-201ENST00000420455 ATP10BO94823 1461 aa20.28■□□□□ 0.84
TMEM50B-201ENST00000420455 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
TMEM50B-201ENST00000420455 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.83
TMEM50B-201ENST00000420455 UACAQ9BZF9 1416 aa20.27■□□□□ 0.83
TMEM50B-201ENST00000420455 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
TMEM50B-201ENST00000420455 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
TMEM50B-201ENST00000420455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.25■□□□□ 0.83
TMEM50B-201ENST00000420455 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
TMEM50B-201ENST00000420455 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
TMEM50B-201ENST00000420455 ZEB1P37275 1124 aaPredicted RBP20.24■□□□□ 0.83
TMEM50B-201ENST00000420455 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
TMEM50B-201ENST00000420455 CDK11AQ9UQ88 783 aaPredicted RBP20.21■□□□□ 0.83
TMEM50B-201ENST00000420455 KIF14Q15058 1648 aa20.18■□□□□ 0.82
TMEM50B-201ENST00000420455 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
TMEM50B-201ENST00000420455 ABCC10Q5T3U5 1492 aa20.16■□□□□ 0.82
TMEM50B-201ENST00000420455 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
TMEM50B-201ENST00000420455 OSCARQ8IYS5 282 aa20.14■□□□□ 0.82
TMEM50B-201ENST00000420455 ZCCHC11Q5TAX3 1644 aaKnown RBP20.12■□□□□ 0.81
TMEM50B-201ENST00000420455 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
TMEM50B-201ENST00000420455 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
TMEM50B-201ENST00000420455 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
TMEM50B-201ENST00000420455 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
TMEM50B-201ENST00000420455 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
TMEM50B-201ENST00000420455 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
TMEM50B-201ENST00000420455 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
TMEM50B-201ENST00000420455 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
TMEM50B-201ENST00000420455 DNMT1P26358 1616 aaKnown RBP20.07■□□□□ 0.8
TMEM50B-201ENST00000420455 AKNAQ7Z591 1439 aa20.06■□□□□ 0.8
TMEM50B-201ENST00000420455 HFM1A2PYH4 1435 aa20.04■□□□□ 0.8
TMEM50B-201ENST00000420455 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
TMEM50B-201ENST00000420455 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
TMEM50B-201ENST00000420455 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
TMEM50B-201ENST00000420455 GCC2Q8IWJ2 1684 aa20.02■□□□□ 0.8
TMEM50B-201ENST00000420455 CAMSAP2Q08AD1 1489 aa20.01■□□□□ 0.79
TMEM50B-201ENST00000420455 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
TMEM50B-201ENST00000420455 CROCC2H7BZ55 1655 aa20■□□□□ 0.79
TMEM50B-201ENST00000420455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20■□□□□ 0.79
TMEM50B-201ENST00000420455 CDC42BPBQ9Y5S2 1711 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms