RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CARMIL1Q5VZK9 1371 aa36.34■■■■□ 3.41
CPNE1-211ENST00000420363 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
CPNE1-211ENST00000420363 PRG4Q92954 1404 aaPredicted RBP36.27■■■■□ 3.4
CPNE1-211ENST00000420363 KIAA0586Q9BVV6 1533 aa36.23■■■■□ 3.39
CPNE1-211ENST00000420363 RAPGEF2Q9Y4G8 1499 aa36.17■■■■□ 3.38
CPNE1-211ENST00000420363 IQGAP2Q13576 1575 aa36.04■■■■□ 3.36
CPNE1-211ENST00000420363 PRXQ9BXM0 1461 aa36.04■■■■□ 3.36
CPNE1-211ENST00000420363 EEA1Q15075 1411 aa36.03■■■■□ 3.36
CPNE1-211ENST00000420363 NPM1P06748 294 aaKnown RBP eCLIP36.03■■■■□ 3.36
CPNE1-211ENST00000420363 AEBP2Q6ZN18 517 aaPredicted RBP36.02■■■■□ 3.36
CPNE1-211ENST00000420363 CTTNBP2Q8WZ74 1663 aa35.93■■■■□ 3.34
CPNE1-211ENST00000420363 CHIC1Q5VXU3 224 aa35.91■■■■□ 3.34
CPNE1-211ENST00000420363 FAM69CQ0P6D2 419 aa35.87■■■■□ 3.33
CPNE1-211ENST00000420363 UGGT2Q9NYU1 1516 aa35.85■■■■□ 3.33
CPNE1-211ENST00000420363 KIF13AQ9H1H9 1805 aa35.83■■■■□ 3.33
CPNE1-211ENST00000420363 CSRNP3Q8WYN3 585 aa35.83■■■■□ 3.33
CPNE1-211ENST00000420363 CARMIL2Q6F5E8 1435 aa35.82■■■■□ 3.32
CPNE1-211ENST00000420363 ABCC10Q5T3U5 1492 aa35.78■■■■□ 3.32
CPNE1-211ENST00000420363 ADCY10Q96PN6 1610 aa35.76■■■■□ 3.32
CPNE1-211ENST00000420363 MAPKBP1O60336 1514 aa35.75■■■■□ 3.31
CPNE1-211ENST00000420363 DISP1Q96F81 1524 aa35.75■■■■□ 3.31
CPNE1-211ENST00000420363 TTBK1Q5TCY1 1321 aaPredicted RBP35.74■■■■□ 3.31
CPNE1-211ENST00000420363 PTPRGP23470 1445 aa35.73■■■■□ 3.31
CPNE1-211ENST00000420363 KIAA0556O60303 1618 aa35.71■■■■□ 3.31
CPNE1-211ENST00000420363 TNIKQ9UKE5 1360 aa35.7■■■■□ 3.31
CPNE1-211ENST00000420363 KIF21BO75037 1637 aa35.68■■■■□ 3.3
CPNE1-211ENST00000420363 DIP2BQ9P265 1576 aa35.62■■■■□ 3.29
CPNE1-211ENST00000420363 GOLGA3Q08378 1498 aa35.61■■■■□ 3.29
CPNE1-211ENST00000420363 FAM9AQ8IZU1 332 aaPredicted RBP35.54■■■■□ 3.28
CPNE1-211ENST00000420363 UHRF1BP1LA0JNW5 1464 aa35.5■■■■□ 3.27
CPNE1-211ENST00000420363 ABCC2Q92887 1545 aa35.48■■■■□ 3.27
CPNE1-211ENST00000420363 UACAQ9BZF9 1416 aa35.45■■■■□ 3.27
CPNE1-211ENST00000420363 SAMD9Q5K651 1589 aa35.45■■■■□ 3.27
CPNE1-211ENST00000420363 TSPOAP1O95153 1857 aa35.4■■■■□ 3.26
CPNE1-211ENST00000420363 ASXL2Q76L83 1435 aa35.39■■■■□ 3.26
CPNE1-211ENST00000420363 PLB1Q6P1J6 1458 aa35.38■■■■□ 3.25
CPNE1-211ENST00000420363 KDM6BO15054 1643 aa35.37■■■■□ 3.25
CPNE1-211ENST00000420363 KDM5BQ9UGL1 1544 aa35.32■■■■□ 3.24
CPNE1-211ENST00000420363 ABCA8O94911 1581 aa35.31■■■■□ 3.24
CPNE1-211ENST00000420363 EFCAB5A4FU69 1503 aa35.28■■■■□ 3.24
CPNE1-211ENST00000420363 GLI2P10070 1586 aa35.24■■■■□ 3.23
CPNE1-211ENST00000420363 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
CPNE1-211ENST00000420363 EPRSP07814 1512 aaKnown RBP35.15■■■■□ 3.22
CPNE1-211ENST00000420363 KDM4FA0A1W2PPD8 638 aa35.14■■■■□ 3.22
CPNE1-211ENST00000420363 UBTFP17480 764 aaKnown RBP35.13■■■■□ 3.21
CPNE1-211ENST00000420363 P3H3Q8IVL6 736 aa35.11■■■■□ 3.21
CPNE1-211ENST00000420363 FHOD3Q2V2M9 1422 aa35.11■■■■□ 3.21
CPNE1-211ENST00000420363 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
CPNE1-211ENST00000420363 PPRC1Q5VV67 1664 aaKnown RBP35.08■■■■□ 3.21
CPNE1-211ENST00000420363 WDR7Q9Y4E6 1490 aa35.03■■■■□ 3.2
CPNE1-211ENST00000420363 TEX14Q8IWB6 1497 aa35.02■■■■□ 3.2
CPNE1-211ENST00000420363 RANGAP1P46060 587 aaPredicted RBP35.01■■■■□ 3.2
CPNE1-211ENST00000420363 EHMT2Q96KQ7 1210 aa35.01■■■■□ 3.2
CPNE1-211ENST00000420363 MAP3K4Q9Y6R4 1608 aa35■■■■□ 3.19
CPNE1-211ENST00000420363 ARHGAP35Q9NRY4 1499 aa34.98■■■■□ 3.19
CPNE1-211ENST00000420363 KCNH8Q96L42 1107 aa34.97■■■■□ 3.19
CPNE1-211ENST00000420363 COL17A1Q9UMD9 1497 aaPredicted RBP34.96■■■■□ 3.19
CPNE1-211ENST00000420363 ATP10BO94823 1461 aa34.94■■■■□ 3.18
CPNE1-211ENST00000420363 NUP153P49790 1475 aaKnown RBP34.94■■■■□ 3.18
CPNE1-211ENST00000420363 FMN1Q68DA7 1419 aa34.89■■■■□ 3.18
CPNE1-211ENST00000420363 CD109Q6YHK3 1445 aa34.87■■■■□ 3.17
CPNE1-211ENST00000420363 ARID3CA6NKF2 412 aa34.82■■■■□ 3.16
CPNE1-211ENST00000420363 CFAP43Q8NDM7 1665 aa34.81■■■■□ 3.16
CPNE1-211ENST00000420363 HECW1Q76N89 1606 aa34.79■■■■□ 3.16
CPNE1-211ENST00000420363 ADGRL1O94910 1474 aa34.78■■■■□ 3.16
CPNE1-211ENST00000420363 MAGI3Q5TCQ9 1506 aa34.77■■■■□ 3.16
CPNE1-211ENST00000420363 CLIP1P30622 1438 aa34.71■■■■□ 3.15
CPNE1-211ENST00000420363 ABCA9Q8IUA7 1624 aa34.69■■■■□ 3.14
CPNE1-211ENST00000420363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.65■■■■□ 3.14
CPNE1-211ENST00000420363 HNRNPUL2Q1KMD3 747 aaKnown RBP34.65■■■■□ 3.14
CPNE1-211ENST00000420363 CDK13Q14004 1512 aaKnown RBP34.65■■■■□ 3.14
CPNE1-211ENST00000420363 PCF11O94913 1555 aaKnown RBP34.62■■■■□ 3.13
CPNE1-211ENST00000420363 CASKIN1Q8WXD9 1431 aa34.59■■■■□ 3.13
CPNE1-211ENST00000420363 LRRIQ1Q96JM4 1722 aa34.56■■■■□ 3.12
CPNE1-211ENST00000420363 FYCO1Q9BQS8 1478 aa34.55■■■■□ 3.12
CPNE1-211ENST00000420363 PLEKHD1A6NEE1 506 aa34.55■■■■□ 3.12
CPNE1-211ENST00000420363 CEP162Q5TB80 1403 aa34.53■■■■□ 3.12
CPNE1-211ENST00000420363 CCDC18Q5T9S5 1454 aa34.52■■■■□ 3.12
CPNE1-211ENST00000420363 PHLDB1Q86UU1 1377 aa34.52■■■■□ 3.12
CPNE1-211ENST00000420363 ARAP3Q8WWN8 1544 aa34.51■■■■□ 3.12
CPNE1-211ENST00000420363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.45■■■■□ 3.111e-38■■□□□ 13.2
CPNE1-211ENST00000420363 ATP1B4Q9UN42 357 aaPredicted RBP34.44■■■■□ 3.1
CPNE1-211ENST00000420363 CDK11AQ9UQ88 783 aaPredicted RBP34.43■■■■□ 3.1
CPNE1-211ENST00000420363 TTC37Q6PGP7 1564 aa34.43■■■■□ 3.1
CPNE1-211ENST00000420363 RAPGEF3O95398 923 aa34.41■■■■□ 3.1
CPNE1-211ENST00000420363 NEO1Q92859 1461 aa34.4■■■■□ 3.1
CPNE1-211ENST00000420363 TROQ12816 1431 aaPredicted RBP34.39■■■■□ 3.1
CPNE1-211ENST00000420363 KIF14Q15058 1648 aa34.39■■■■□ 3.1
CPNE1-211ENST00000420363 CFAP74Q9C0B2 1584 aa34.36■■■■□ 3.09
CPNE1-211ENST00000420363 LOC105371045A0A1W2PR82 267 aa34.32■■■■□ 3.08
CPNE1-211ENST00000420363 HECW2Q9P2P5 1572 aa34.3■■■■□ 3.08
CPNE1-211ENST00000420363 MYO5CQ9NQX4 1742 aa34.28■■■■□ 3.08
CPNE1-211ENST00000420363 FANCAO15360 1455 aa34.26■■■■□ 3.07
CPNE1-211ENST00000420363 PLCH2O75038 1416 aa34.23■■■■□ 3.07
CPNE1-211ENST00000420363 ARID4BQ4LE39 1312 aaPredicted RBP34.21■■■■□ 3.07
CPNE1-211ENST00000420363 ILDR1Q86SU0 546 aaPredicted RBP34.19■■■■□ 3.06
CPNE1-211ENST00000420363 AKNAQ7Z591 1439 aa34.17■■■■□ 3.06
CPNE1-211ENST00000420363 FRMPD1Q5SYB0 1578 aa34.16■■■■□ 3.06
CPNE1-211ENST00000420363 VPS8Q8N3P4 1428 aa34.16■■■■□ 3.06
CPNE1-211ENST00000420363 DENND4BO75064 1496 aaPredicted RBP34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms