RNA–Protein interactions for RNA: ENST00000418590.3

SBF1-204, Transcript of SET binding factor 1, humanhuman

TSL 1 (best)

Gene SBF1, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-204ENST00000418590 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
SBF1-204ENST00000418590 CYB5RLQ6IPT4 315 aa25.76■■□□□ 1.71
SBF1-204ENST00000418590 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
SBF1-204ENST00000418590 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
SBF1-204ENST00000418590 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
SBF1-204ENST00000418590 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
SBF1-204ENST00000418590 CEP162Q5TB80 1403 aa25.66■■□□□ 1.7
SBF1-204ENST00000418590 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
SBF1-204ENST00000418590 FHAD1B1AJZ9 1412 aa25.6■■□□□ 1.69
SBF1-204ENST00000418590 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
SBF1-204ENST00000418590 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
SBF1-204ENST00000418590 NUP160Q12769 1436 aa25.52■■□□□ 1.68
SBF1-204ENST00000418590 CLIP1P30622 1438 aa25.5■■□□□ 1.67
SBF1-204ENST00000418590 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
SBF1-204ENST00000418590 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
SBF1-204ENST00000418590 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
SBF1-204ENST00000418590 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
SBF1-204ENST00000418590 ARHGAP35Q9NRY4 1499 aa25.34■■□□□ 1.65
SBF1-204ENST00000418590 JPH4Q96JJ6 628 aa25.32■■□□□ 1.64
SBF1-204ENST00000418590 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
SBF1-204ENST00000418590 IQGAP2Q13576 1575 aa25.28■■□□□ 1.64
SBF1-204ENST00000418590 EFCAB5A4FU69 1503 aa25.27■■□□□ 1.64
SBF1-204ENST00000418590 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
SBF1-204ENST00000418590 KIAA0586Q9BVV6 1533 aa25.25■■□□□ 1.63
SBF1-204ENST00000418590 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
SBF1-204ENST00000418590 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
SBF1-204ENST00000418590 UGGT2Q9NYU1 1516 aa25.16■■□□□ 1.62
SBF1-204ENST00000418590 FHOD3Q2V2M9 1422 aa25.13■■□□□ 1.61
SBF1-204ENST00000418590 P3H3Q8IVL6 736 aa25.07■■□□□ 1.6
SBF1-204ENST00000418590 KIAA0556O60303 1618 aa25.04■■□□□ 1.6
SBF1-204ENST00000418590 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
SBF1-204ENST00000418590 FMN1Q68DA7 1419 aa25.01■■□□□ 1.59
SBF1-204ENST00000418590 PCF11O94913 1555 aaKnown RBP25■■□□□ 1.59
SBF1-204ENST00000418590 ADCY10Q96PN6 1610 aa24.98■■□□□ 1.59
SBF1-204ENST00000418590 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.58
SBF1-204ENST00000418590 FYCO1Q9BQS8 1478 aa24.94■■□□□ 1.58
SBF1-204ENST00000418590 PTPRGP23470 1445 aa24.94■■□□□ 1.58
SBF1-204ENST00000418590 CARMIL2Q6F5E8 1435 aa24.93■■□□□ 1.58
SBF1-204ENST00000418590 APLP2Q06481 763 aa24.91■■□□□ 1.58
SBF1-204ENST00000418590 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
SBF1-204ENST00000418590 NPM1P06748 294 aaKnown RBP eCLIP24.89■■□□□ 1.58
SBF1-204ENST00000418590 MAP3K1Q13233 1512 aa24.87■■□□□ 1.57
SBF1-204ENST00000418590 KIF13AQ9H1H9 1805 aa24.87■■□□□ 1.57
SBF1-204ENST00000418590 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
SBF1-204ENST00000418590 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
SBF1-204ENST00000418590 FAM69CQ0P6D2 419 aa24.8■■□□□ 1.56
SBF1-204ENST00000418590 HECW1Q76N89 1606 aa24.8■■□□□ 1.56
SBF1-204ENST00000418590 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
SBF1-204ENST00000418590 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
SBF1-204ENST00000418590 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
SBF1-204ENST00000418590 KANK4Q5T7N3 995 aaPredicted RBP24.76■■□□□ 1.55
SBF1-204ENST00000418590 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
SBF1-204ENST00000418590 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
SBF1-204ENST00000418590 UACAQ9BZF9 1416 aa24.75■■□□□ 1.55
SBF1-204ENST00000418590 ABCC10Q5T3U5 1492 aa24.74■■□□□ 1.55
SBF1-204ENST00000418590 DIP2BQ9P265 1576 aa24.73■■□□□ 1.55
SBF1-204ENST00000418590 ABCC2Q92887 1545 aa24.72■■□□□ 1.55
SBF1-204ENST00000418590 CCDC18Q5T9S5 1454 aa24.72■■□□□ 1.55
SBF1-204ENST00000418590 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
SBF1-204ENST00000418590 PLB1Q6P1J6 1458 aa24.7■■□□□ 1.54
SBF1-204ENST00000418590 EPRSP07814 1512 aaKnown RBP24.7■■□□□ 1.54
SBF1-204ENST00000418590 NUP153P49790 1475 aaKnown RBP24.69■■□□□ 1.54
SBF1-204ENST00000418590 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
SBF1-204ENST00000418590 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
SBF1-204ENST00000418590 ABCA8O94911 1581 aa24.69■■□□□ 1.54
SBF1-204ENST00000418590 UHRF1BP1LA0JNW5 1464 aa24.67■■□□□ 1.54
SBF1-204ENST00000418590 ASXL2Q76L83 1435 aa24.66■■□□□ 1.54
SBF1-204ENST00000418590 ARID3CA6NKF2 412 aa24.64■■□□□ 1.54
SBF1-204ENST00000418590 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.53
SBF1-204ENST00000418590 ZCCHC11Q5TAX3 1644 aaKnown RBP24.63■■□□□ 1.53
SBF1-204ENST00000418590 EHBP1L1Q8N3D4 1523 aa24.59■■□□□ 1.53
SBF1-204ENST00000418590 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
SBF1-204ENST00000418590 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.52
SBF1-204ENST00000418590 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
SBF1-204ENST00000418590 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
SBF1-204ENST00000418590 PHLDB1Q86UU1 1377 aa24.48■■□□□ 1.51
SBF1-204ENST00000418590 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
SBF1-204ENST00000418590 ATP10BO94823 1461 aa24.48■■□□□ 1.51
SBF1-204ENST00000418590 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
SBF1-204ENST00000418590 PPRC1Q5VV67 1664 aaKnown RBP24.46■■□□□ 1.51
SBF1-204ENST00000418590 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
SBF1-204ENST00000418590 GLI2P10070 1586 aa24.44■■□□□ 1.5
SBF1-204ENST00000418590 WDR7Q9Y4E6 1490 aa24.44■■□□□ 1.5
SBF1-204ENST00000418590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.43■■□□□ 1.5
SBF1-204ENST00000418590 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
SBF1-204ENST00000418590 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
SBF1-204ENST00000418590 KDM6BO15054 1643 aa24.43■■□□□ 1.5
SBF1-204ENST00000418590 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
SBF1-204ENST00000418590 CCNB3Q8WWL7 1395 aa24.39■■□□□ 1.49
SBF1-204ENST00000418590 MAP3K4Q9Y6R4 1608 aa24.38■■□□□ 1.49
SBF1-204ENST00000418590 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
SBF1-204ENST00000418590 FGD6Q6ZV73 1430 aa24.32■■□□□ 1.48
SBF1-204ENST00000418590 KIF14Q15058 1648 aa24.32■■□□□ 1.48
SBF1-204ENST00000418590 PLEKHD1A6NEE1 506 aa24.32■■□□□ 1.48
SBF1-204ENST00000418590 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
SBF1-204ENST00000418590 CD109Q6YHK3 1445 aa24.27■■□□□ 1.48
SBF1-204ENST00000418590 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
SBF1-204ENST00000418590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.47
SBF1-204ENST00000418590 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
SBF1-204ENST00000418590 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms