RNA–Protein interactions for RNA: ENST00000418590.3

SBF1-204, Transcript of SET binding factor 1, humanhuman

TSL 1 (best)

Gene SBF1, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-204ENST00000418590 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
SBF1-204ENST00000418590 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
SBF1-204ENST00000418590 ABCC9O60706 1549 aa32.2■■■□□ 2.75
SBF1-204ENST00000418590 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
SBF1-204ENST00000418590 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
SBF1-204ENST00000418590 RB1CC1Q8TDY2 1594 aa30.64■■■□□ 2.5
SBF1-204ENST00000418590 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.47
SBF1-204ENST00000418590 NACADO15069 1562 aa30.49■■■□□ 2.47
SBF1-204ENST00000418590 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
SBF1-204ENST00000418590 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.419e-7■■■□□ 16.3
SBF1-204ENST00000418590 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
SBF1-204ENST00000418590 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
SBF1-204ENST00000418590 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
SBF1-204ENST00000418590 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
SBF1-204ENST00000418590 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
SBF1-204ENST00000418590 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
SBF1-204ENST00000418590 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
SBF1-204ENST00000418590 CECR2Q9BXF3 1484 aa28.87■■■□□ 2.21
SBF1-204ENST00000418590 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
SBF1-204ENST00000418590 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
SBF1-204ENST00000418590 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
SBF1-204ENST00000418590 MROH2BQ7Z745 1585 aa28.44■■■□□ 2.14
SBF1-204ENST00000418590 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
SBF1-204ENST00000418590 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
SBF1-204ENST00000418590 WIZO95785 1651 aa28.19■■■□□ 2.1
SBF1-204ENST00000418590 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
SBF1-204ENST00000418590 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
SBF1-204ENST00000418590 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
SBF1-204ENST00000418590 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
SBF1-204ENST00000418590 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
SBF1-204ENST00000418590 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
SBF1-204ENST00000418590 NESP48681 1621 aa27.79■■■□□ 2.04
SBF1-204ENST00000418590 ERCC6Q03468 1493 aa27.7■■■□□ 2.02
SBF1-204ENST00000418590 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
SBF1-204ENST00000418590 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
SBF1-204ENST00000418590 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
SBF1-204ENST00000418590 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
SBF1-204ENST00000418590 CUX2O14529 1486 aa27.37■■□□□ 1.97
SBF1-204ENST00000418590 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
SBF1-204ENST00000418590 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
SBF1-204ENST00000418590 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
SBF1-204ENST00000418590 CFTRP13569 1480 aa27.13■■□□□ 1.93
SBF1-204ENST00000418590 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
SBF1-204ENST00000418590 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
SBF1-204ENST00000418590 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
SBF1-204ENST00000418590 DNAJC5Q9H3Z4 198 aa26.99■■□□□ 1.91
SBF1-204ENST00000418590 WDR62O43379 1518 aa26.98■■□□□ 1.91
SBF1-204ENST00000418590 ABCC8Q09428 1581 aa26.95■■□□□ 1.91
SBF1-204ENST00000418590 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
SBF1-204ENST00000418590 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.9
SBF1-204ENST00000418590 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
SBF1-204ENST00000418590 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
SBF1-204ENST00000418590 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
SBF1-204ENST00000418590 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
SBF1-204ENST00000418590 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
SBF1-204ENST00000418590 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
SBF1-204ENST00000418590 CUX1P39880 1505 aa26.62■■□□□ 1.85
SBF1-204ENST00000418590 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
SBF1-204ENST00000418590 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
SBF1-204ENST00000418590 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
SBF1-204ENST00000418590 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
SBF1-204ENST00000418590 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.81
SBF1-204ENST00000418590 SOGA1O94964 1423 aa26.39■■□□□ 1.81
SBF1-204ENST00000418590 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
SBF1-204ENST00000418590 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
SBF1-204ENST00000418590 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
SBF1-204ENST00000418590 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.81
SBF1-204ENST00000418590 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
SBF1-204ENST00000418590 EEA1Q15075 1411 aa26.33■■□□□ 1.81
SBF1-204ENST00000418590 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
SBF1-204ENST00000418590 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
SBF1-204ENST00000418590 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
SBF1-204ENST00000418590 FBLN2P98095 1184 aa26.16■■□□□ 1.78
SBF1-204ENST00000418590 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
SBF1-204ENST00000418590 CSRNP3Q8WYN3 585 aa26.14■■□□□ 1.78
SBF1-204ENST00000418590 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.77
SBF1-204ENST00000418590 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
SBF1-204ENST00000418590 CHD1O14646 1710 aa26.13■■□□□ 1.77
SBF1-204ENST00000418590 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
SBF1-204ENST00000418590 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
SBF1-204ENST00000418590 KIF21BO75037 1637 aa26.02■■□□□ 1.76
SBF1-204ENST00000418590 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
SBF1-204ENST00000418590 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
SBF1-204ENST00000418590 GAPVD1Q14C86 1478 aa25.96■■□□□ 1.75
SBF1-204ENST00000418590 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
SBF1-204ENST00000418590 RIMBP3CA6NJZ7 1639 aa25.95■■□□□ 1.75
SBF1-204ENST00000418590 RIMBP3BA6NNM3 1639 aa25.95■■□□□ 1.75
SBF1-204ENST00000418590 RIMBP3Q9UFD9 1639 aa25.95■■□□□ 1.75
SBF1-204ENST00000418590 GOLGA3Q08378 1498 aa25.95■■□□□ 1.74
SBF1-204ENST00000418590 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
SBF1-204ENST00000418590 EHMT2Q96KQ7 1210 aa25.94■■□□□ 1.74
SBF1-204ENST00000418590 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
SBF1-204ENST00000418590 IGF1RP08069 1367 aa25.92■■□□□ 1.74
SBF1-204ENST00000418590 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.73
SBF1-204ENST00000418590 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
SBF1-204ENST00000418590 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
SBF1-204ENST00000418590 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
SBF1-204ENST00000418590 SYNJ2O15056 1496 aa25.83■■□□□ 1.73
SBF1-204ENST00000418590 CUL7Q14999 1698 aa25.8■■□□□ 1.72
SBF1-204ENST00000418590 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms