RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
RUFY3-203ENST00000417478 CLIP1P30622 1438 aa31.81■■■□□ 2.68
RUFY3-203ENST00000417478 CHD1O14646 1710 aa31.76■■■□□ 2.67
RUFY3-203ENST00000417478 CEP170Q5SW79 1584 aa31.7■■■□□ 2.67
RUFY3-203ENST00000417478 ARHGAP35Q9NRY4 1499 aa31.64■■■□□ 2.66
RUFY3-203ENST00000417478 IQGAP2Q13576 1575 aa31.64■■■□□ 2.66
RUFY3-203ENST00000417478 NUP160Q12769 1436 aa31.63■■■□□ 2.65
RUFY3-203ENST00000417478 KIAA0586Q9BVV6 1533 aa31.61■■■□□ 2.65
RUFY3-203ENST00000417478 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
RUFY3-203ENST00000417478 P3H3Q8IVL6 736 aa31.55■■■□□ 2.64
RUFY3-203ENST00000417478 PCGF6Q9BYE7 350 aa31.52■■■□□ 2.64
RUFY3-203ENST00000417478 EFCAB5A4FU69 1503 aa31.5■■■□□ 2.63
RUFY3-203ENST00000417478 SAMD9Q5K651 1589 aa31.49■■■□□ 2.63
RUFY3-203ENST00000417478 FHOD3Q2V2M9 1422 aa31.46■■■□□ 2.63
RUFY3-203ENST00000417478 UGGT2Q9NYU1 1516 aa31.46■■■□□ 2.63
RUFY3-203ENST00000417478 VPS8Q8N3P4 1428 aa31.45■■■□□ 2.63
RUFY3-203ENST00000417478 TRIM26Q12899 539 aaPredicted RBP31.45■■■□□ 2.62
RUFY3-203ENST00000417478 JPH4Q96JJ6 628 aa31.39■■■□□ 2.61
RUFY3-203ENST00000417478 DISP1Q96F81 1524 aa31.37■■■□□ 2.61
RUFY3-203ENST00000417478 KIAA0556O60303 1618 aa31.33■■■□□ 2.61
RUFY3-203ENST00000417478 CLASP1Q7Z460 1538 aa31.32■■■□□ 2.6
RUFY3-203ENST00000417478 SHROOM2Q13796 1616 aa31.27■■■□□ 2.6
RUFY3-203ENST00000417478 PPARGC1BQ86YN6 1023 aaKnown RBP31.26■■■□□ 2.59
RUFY3-203ENST00000417478 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
RUFY3-203ENST00000417478 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
RUFY3-203ENST00000417478 TTBK1Q5TCY1 1321 aaPredicted RBP31.22■■■□□ 2.59
RUFY3-203ENST00000417478 FMN1Q68DA7 1419 aa31.21■■■□□ 2.59
RUFY3-203ENST00000417478 CARMIL2Q6F5E8 1435 aa31.21■■■□□ 2.59
RUFY3-203ENST00000417478 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
RUFY3-203ENST00000417478 ERCC6L2Q5T890 1561 aa31.16■■■□□ 2.58
RUFY3-203ENST00000417478 ATP1B4Q9UN42 357 aaPredicted RBP31.13■■■□□ 2.57
RUFY3-203ENST00000417478 CASKIN1Q8WXD9 1431 aa31.13■■■□□ 2.57
RUFY3-203ENST00000417478 FYCO1Q9BQS8 1478 aa31.1■■■□□ 2.57
RUFY3-203ENST00000417478 APLP2Q06481 763 aa31.1■■■□□ 2.57
RUFY3-203ENST00000417478 LRRIQ1Q96JM4 1722 aa31.06■■■□□ 2.56
RUFY3-203ENST00000417478 PLB1Q6P1J6 1458 aa30.99■■■□□ 2.55
RUFY3-203ENST00000417478 TIAM1Q13009 1591 aa30.99■■■□□ 2.55
RUFY3-203ENST00000417478 KANK4Q5T7N3 995 aaPredicted RBP30.98■■■□□ 2.55
RUFY3-203ENST00000417478 RAPGEF6Q8TEU7 1601 aa30.98■■■□□ 2.55
RUFY3-203ENST00000417478 PTPRGP23470 1445 aa30.98■■■□□ 2.55
RUFY3-203ENST00000417478 HRCP23327 699 aa30.97■■■□□ 2.55
RUFY3-203ENST00000417478 HECW1Q76N89 1606 aa30.96■■■□□ 2.55
RUFY3-203ENST00000417478 CFAP43Q8NDM7 1665 aa30.96■■■□□ 2.55
RUFY3-203ENST00000417478 ARID3CA6NKF2 412 aa30.94■■■□□ 2.54
RUFY3-203ENST00000417478 MAP3K1Q13233 1512 aa30.93■■■□□ 2.54
RUFY3-203ENST00000417478 ABCA8O94911 1581 aa30.9■■■□□ 2.54
RUFY3-203ENST00000417478 NUP153P49790 1475 aaKnown RBP30.9■■■□□ 2.54
RUFY3-203ENST00000417478 EPRSP07814 1512 aaKnown RBP30.88■■■□□ 2.53
RUFY3-203ENST00000417478 CDK13Q14004 1512 aaKnown RBP30.87■■■□□ 2.53
RUFY3-203ENST00000417478 LRRC9Q6ZRR7 1453 aa30.84■■■□□ 2.53
RUFY3-203ENST00000417478 CCDC18Q5T9S5 1454 aa30.83■■■□□ 2.53
RUFY3-203ENST00000417478 UACAQ9BZF9 1416 aa30.78■■■□□ 2.52
RUFY3-203ENST00000417478 MAGI3Q5TCQ9 1506 aa30.76■■■□□ 2.51
RUFY3-203ENST00000417478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.73■■■□□ 2.51
RUFY3-203ENST00000417478 HNRNPUL2Q1KMD3 747 aaKnown RBP30.73■■■□□ 2.51
RUFY3-203ENST00000417478 ARHGEF11O15085 1522 aa30.72■■■□□ 2.51
RUFY3-203ENST00000417478 MTUS2Q5JR59 1369 aa30.71■■■□□ 2.51
RUFY3-203ENST00000417478 ABCC2Q92887 1545 aa30.71■■■□□ 2.51
RUFY3-203ENST00000417478 ATP10BO94823 1461 aa30.69■■■□□ 2.5
RUFY3-203ENST00000417478 EHBP1L1Q8N3D4 1523 aa30.65■■■□□ 2.5
RUFY3-203ENST00000417478 ADCY10Q96PN6 1610 aa30.63■■■□□ 2.49
RUFY3-203ENST00000417478 UHRF1BP1LA0JNW5 1464 aa30.63■■■□□ 2.49
RUFY3-203ENST00000417478 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
RUFY3-203ENST00000417478 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
RUFY3-203ENST00000417478 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
RUFY3-203ENST00000417478 SUPT6HQ7KZ85 1726 aaKnown RBP30.58■■■□□ 2.49
RUFY3-203ENST00000417478 PHLDB1Q86UU1 1377 aa30.57■■■□□ 2.48
RUFY3-203ENST00000417478 CDK11AQ9UQ88 783 aaPredicted RBP30.57■■■□□ 2.48
RUFY3-203ENST00000417478 ZCCHC11Q5TAX3 1644 aaKnown RBP30.55■■■□□ 2.48
RUFY3-203ENST00000417478 NCOA2Q15596 1464 aa30.55■■■□□ 2.48
RUFY3-203ENST00000417478 KDM5BQ9UGL1 1544 aa30.53■■■□□ 2.48
RUFY3-203ENST00000417478 TROQ12816 1431 aaPredicted RBP30.52■■■□□ 2.48
RUFY3-203ENST00000417478 PLEKHD1A6NEE1 506 aa30.5■■■□□ 2.47
RUFY3-203ENST00000417478 KIF14Q15058 1648 aa30.48■■■□□ 2.47
RUFY3-203ENST00000417478 CYB5RLQ6IPT4 315 aa30.47■■■□□ 2.47
RUFY3-203ENST00000417478 RRBP1Q9P2E9 1410 aaKnown RBP30.43■■■□□ 2.46
RUFY3-203ENST00000417478 ZEB1P37275 1124 aaPredicted RBP30.43■■■□□ 2.46
RUFY3-203ENST00000417478 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
RUFY3-203ENST00000417478 MYOM3Q5VTT5 1437 aa30.37■■■□□ 2.45
RUFY3-203ENST00000417478 FGD6Q6ZV73 1430 aa30.35■■■□□ 2.45
RUFY3-203ENST00000417478 KCNH8Q96L42 1107 aa30.32■■■□□ 2.44
RUFY3-203ENST00000417478 NPM1P06748 294 aaKnown RBP eCLIP30.31■■■□□ 2.44
RUFY3-203ENST00000417478 ABCC10Q5T3U5 1492 aa30.3■■■□□ 2.44
RUFY3-203ENST00000417478 FAM50AQ14320 339 aaKnown RBP30.29■■■□□ 2.44
RUFY3-203ENST00000417478 ASXL2Q76L83 1435 aa30.27■■■□□ 2.44
RUFY3-203ENST00000417478 CDC42BPAQ5VT25 1732 aa30.26■■■□□ 2.44
RUFY3-203ENST00000417478 WDR7Q9Y4E6 1490 aa30.26■■■□□ 2.43
RUFY3-203ENST00000417478 GPATCH8Q9UKJ3 1502 aaKnown RBP30.25■■■□□ 2.43
RUFY3-203ENST00000417478 PTPN23Q9H3S7 1636 aa30.25■■■□□ 2.43
RUFY3-203ENST00000417478 TTC37Q6PGP7 1564 aa30.25■■■□□ 2.43
RUFY3-203ENST00000417478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.43
RUFY3-203ENST00000417478 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
RUFY3-203ENST00000417478 ITGAEP38570 1179 aa30.22■■■□□ 2.43
RUFY3-203ENST00000417478 MIA2Q96PC5 1412 aa30.2■■■□□ 2.42
RUFY3-203ENST00000417478 CFDP1Q9UEE9 299 aaPredicted RBP30.16■■■□□ 2.42
RUFY3-203ENST00000417478 ZNF644Q9H582 1327 aaPredicted RBP30.16■■■□□ 2.42
RUFY3-203ENST00000417478 CDC42BPBQ9Y5S2 1711 aa30.15■■■□□ 2.42
RUFY3-203ENST00000417478 TCOF1Q13428 1488 aaKnown RBP30.15■■■□□ 2.42
RUFY3-203ENST00000417478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.14■■■□□ 2.42
RUFY3-203ENST00000417478 MYO5CQ9NQX4 1742 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms