RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
RUFY3-203ENST00000417478 CCDC180Q9P1Z9 1646 aa40.37■■■■■ 4.05
RUFY3-203ENST00000417478 ABCC9O60706 1549 aa38.63■■■■□ 3.77
RUFY3-203ENST00000417478 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
RUFY3-203ENST00000417478 DCAF8L2P0C7V8 631 aa38.27■■■■□ 3.72
RUFY3-203ENST00000417478 DCAF1Q9Y4B6 1507 aa38.04■■■■□ 3.68
RUFY3-203ENST00000417478 MYO15BQ96JP2 1530 aa37.73■■■■□ 3.63
RUFY3-203ENST00000417478 NACADO15069 1562 aa37.68■■■■□ 3.62
RUFY3-203ENST00000417478 RB1CC1Q8TDY2 1594 aa37.48■■■■□ 3.59
RUFY3-203ENST00000417478 SHROOM4Q9ULL8 1493 aa37.4■■■■□ 3.58
RUFY3-203ENST00000417478 SCRIBQ14160 1630 aa37.15■■■■□ 3.54
RUFY3-203ENST00000417478 UNC13AQ9UPW8 1703 aa36.84■■■■□ 3.49
RUFY3-203ENST00000417478 BICRAQ9NZM4 1560 aa36.42■■■■□ 3.42
RUFY3-203ENST00000417478 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
RUFY3-203ENST00000417478 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
RUFY3-203ENST00000417478 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
RUFY3-203ENST00000417478 MROH2BQ7Z745 1585 aa35.64■■■■□ 3.3
RUFY3-203ENST00000417478 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
RUFY3-203ENST00000417478 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
RUFY3-203ENST00000417478 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
RUFY3-203ENST00000417478 WIZO95785 1651 aa35.35■■■■□ 3.25
RUFY3-203ENST00000417478 EIF4G1Q04637 1599 aaKnown RBP35.33■■■■□ 3.25
RUFY3-203ENST00000417478 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
RUFY3-203ENST00000417478 ATAD2BQ9ULI0 1458 aa35.04■■■■□ 3.2
RUFY3-203ENST00000417478 SMARCA2P51531 1590 aa34.98■■■■□ 3.19
RUFY3-203ENST00000417478 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
RUFY3-203ENST00000417478 TOP2AP11388 1531 aaKnown RBP34.9■■■■□ 3.18
RUFY3-203ENST00000417478 BAZ1BQ9UIG0 1483 aaKnown RBP34.82■■■■□ 3.16
RUFY3-203ENST00000417478 NCAPD3P42695 1498 aa34.78■■■■□ 3.16
RUFY3-203ENST00000417478 HMGXB3Q12766 1538 aa34.7■■■■□ 3.15
RUFY3-203ENST00000417478 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
RUFY3-203ENST00000417478 DNAJC5BQ9UF47 199 aa34.49■■■■□ 3.11
RUFY3-203ENST00000417478 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
RUFY3-203ENST00000417478 CFTRP13569 1480 aa33.91■■■■□ 3.02
RUFY3-203ENST00000417478 CADPSQ9ULU8 1353 aa33.87■■■■□ 3.01
RUFY3-203ENST00000417478 NESP48681 1621 aa33.81■■■■□ 3
RUFY3-203ENST00000417478 PRDM2Q13029 1718 aa33.77■■■■□ 3
RUFY3-203ENST00000417478 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
RUFY3-203ENST00000417478 LAMC3Q9Y6N6 1575 aa33.68■■■□□ 2.98
RUFY3-203ENST00000417478 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
RUFY3-203ENST00000417478 FANCD2Q9BXW9 1451 aa33.53■■■□□ 2.96
RUFY3-203ENST00000417478 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
RUFY3-203ENST00000417478 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
RUFY3-203ENST00000417478 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
RUFY3-203ENST00000417478 KIF21AQ7Z4S6 1674 aa33.4■■■□□ 2.94
RUFY3-203ENST00000417478 CUX1P39880 1505 aa33.34■■■□□ 2.93
RUFY3-203ENST00000417478 CEP164Q9UPV0 1460 aa33.34■■■□□ 2.93
RUFY3-203ENST00000417478 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
RUFY3-203ENST00000417478 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
RUFY3-203ENST00000417478 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
RUFY3-203ENST00000417478 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
RUFY3-203ENST00000417478 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
RUFY3-203ENST00000417478 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
RUFY3-203ENST00000417478 FAM9AQ8IZU1 332 aaPredicted RBP33.04■■■□□ 2.88
RUFY3-203ENST00000417478 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
RUFY3-203ENST00000417478 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
RUFY3-203ENST00000417478 SOGA1O94964 1423 aa33.01■■■□□ 2.87
RUFY3-203ENST00000417478 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.86
RUFY3-203ENST00000417478 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
RUFY3-203ENST00000417478 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
RUFY3-203ENST00000417478 WDR62O43379 1518 aa32.89■■■□□ 2.86
RUFY3-203ENST00000417478 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
RUFY3-203ENST00000417478 CUX2O14529 1486 aa32.73■■■□□ 2.83
RUFY3-203ENST00000417478 EEA1Q15075 1411 aa32.73■■■□□ 2.83
RUFY3-203ENST00000417478 LOC105371045A0A1W2PR82 267 aa32.71■■■□□ 2.83
RUFY3-203ENST00000417478 ABCA10Q8WWZ4 1543 aa32.69■■■□□ 2.82
RUFY3-203ENST00000417478 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
RUFY3-203ENST00000417478 WDR97A6NE52 1622 aa32.68■■■□□ 2.82
RUFY3-203ENST00000417478 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
RUFY3-203ENST00000417478 CSRNP3Q8WYN3 585 aa32.67■■■□□ 2.82
RUFY3-203ENST00000417478 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
RUFY3-203ENST00000417478 TDRD9Q8NDG6 1382 aaKnown RBP32.56■■■□□ 2.8
RUFY3-203ENST00000417478 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
RUFY3-203ENST00000417478 ABCA5Q8WWZ7 1642 aa32.5■■■□□ 2.79
RUFY3-203ENST00000417478 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
RUFY3-203ENST00000417478 IGF1RP08069 1367 aa32.47■■■□□ 2.79
RUFY3-203ENST00000417478 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
RUFY3-203ENST00000417478 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.782e-6■■■□□ 18.3
RUFY3-203ENST00000417478 KIF21BO75037 1637 aa32.41■■■□□ 2.78
RUFY3-203ENST00000417478 PRXQ9BXM0 1461 aa32.37■■■□□ 2.77
RUFY3-203ENST00000417478 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
RUFY3-203ENST00000417478 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
RUFY3-203ENST00000417478 EIF4G3O43432 1585 aaKnown RBP32.33■■■□□ 2.77
RUFY3-203ENST00000417478 GOLGA3Q08378 1498 aa32.32■■■□□ 2.76
RUFY3-203ENST00000417478 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
RUFY3-203ENST00000417478 CARMIL1Q5VZK9 1371 aa32.28■■■□□ 2.76
RUFY3-203ENST00000417478 UBTFP17480 764 aaKnown RBP32.24■■■□□ 2.75
RUFY3-203ENST00000417478 CUL7Q14999 1698 aa32.24■■■□□ 2.75
RUFY3-203ENST00000417478 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
RUFY3-203ENST00000417478 TNIKQ9UKE5 1360 aa32.13■■■□□ 2.73
RUFY3-203ENST00000417478 SNAPC4Q5SXM2 1469 aa32.1■■■□□ 2.73
RUFY3-203ENST00000417478 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
RUFY3-203ENST00000417478 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
RUFY3-203ENST00000417478 MAGI1Q96QZ7 1491 aaPredicted RBP32■■■□□ 2.71
RUFY3-203ENST00000417478 CEP162Q5TB80 1403 aa31.97■■■□□ 2.71
RUFY3-203ENST00000417478 RANGAP1P46060 587 aaPredicted RBP31.93■■■□□ 2.7
RUFY3-203ENST00000417478 SYNJ2O15056 1496 aa31.89■■■□□ 2.7
RUFY3-203ENST00000417478 CTTNBP2Q8WZ74 1663 aa31.87■■■□□ 2.69
RUFY3-203ENST00000417478 FBLN2P98095 1184 aa31.86■■■□□ 2.69
RUFY3-203ENST00000417478 GRIN2AQ12879 1464 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms