RNA–Protein interactions for RNA: ENST00000415696.1

KARSP2-201, Transcript of lysyl-tRNA synthetase pseudogene 2, humanhuman

BASIC

Gene KARSP2, Length 1,639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP2-201ENST00000415696 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
KARSP2-201ENST00000415696 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
KARSP2-201ENST00000415696 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
KARSP2-201ENST00000415696 ADAMTS12P58397 1594 aa11.27□□□□□ -0.6
KARSP2-201ENST00000415696 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
KARSP2-201ENST00000415696 MAGI1Q96QZ7 1491 aaPredicted RBP11.27□□□□□ -0.61
KARSP2-201ENST00000415696 CTTNBP2Q8WZ74 1663 aa11.26□□□□□ -0.61
KARSP2-201ENST00000415696 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
KARSP2-201ENST00000415696 APLP2Q06481 763 aa11.24□□□□□ -0.61
KARSP2-201ENST00000415696 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
KARSP2-201ENST00000415696 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
KARSP2-201ENST00000415696 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
KARSP2-201ENST00000415696 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
KARSP2-201ENST00000415696 ARHGAP35Q9NRY4 1499 aa11.22□□□□□ -0.61
KARSP2-201ENST00000415696 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
KARSP2-201ENST00000415696 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
KARSP2-201ENST00000415696 KCNA4P22459 653 aa11.19□□□□□ -0.62
KARSP2-201ENST00000415696 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
KARSP2-201ENST00000415696 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
KARSP2-201ENST00000415696 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
KARSP2-201ENST00000415696 KIAA0586Q9BVV6 1533 aa11.16□□□□□ -0.62
KARSP2-201ENST00000415696 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
KARSP2-201ENST00000415696 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.62
KARSP2-201ENST00000415696 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
KARSP2-201ENST00000415696 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
KARSP2-201ENST00000415696 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
KARSP2-201ENST00000415696 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
KARSP2-201ENST00000415696 FBLN2P98095 1184 aa11.1□□□□□ -0.63
KARSP2-201ENST00000415696 NUP160Q12769 1436 aa11.1□□□□□ -0.63
KARSP2-201ENST00000415696 FHOD3Q2V2M9 1422 aa11.1□□□□□ -0.63
KARSP2-201ENST00000415696 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
KARSP2-201ENST00000415696 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
KARSP2-201ENST00000415696 P3H3Q8IVL6 736 aa11.07□□□□□ -0.64
KARSP2-201ENST00000415696 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
KARSP2-201ENST00000415696 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
KARSP2-201ENST00000415696 PCF11O94913 1555 aaKnown RBP11.05□□□□□ -0.64
KARSP2-201ENST00000415696 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
KARSP2-201ENST00000415696 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
KARSP2-201ENST00000415696 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
KARSP2-201ENST00000415696 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
KARSP2-201ENST00000415696 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.65
KARSP2-201ENST00000415696 DISP1Q96F81 1524 aa11.01□□□□□ -0.65
KARSP2-201ENST00000415696 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
KARSP2-201ENST00000415696 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
KARSP2-201ENST00000415696 CHD1O14646 1710 aa11.01□□□□□ -0.65
KARSP2-201ENST00000415696 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
KARSP2-201ENST00000415696 TTBK1Q5TCY1 1321 aaPredicted RBP10.99□□□□□ -0.65
KARSP2-201ENST00000415696 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
KARSP2-201ENST00000415696 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
KARSP2-201ENST00000415696 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
KARSP2-201ENST00000415696 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.66
KARSP2-201ENST00000415696 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
KARSP2-201ENST00000415696 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
KARSP2-201ENST00000415696 RAPGEF6Q8TEU7 1601 aa10.94□□□□□ -0.66
KARSP2-201ENST00000415696 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
KARSP2-201ENST00000415696 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
KARSP2-201ENST00000415696 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
KARSP2-201ENST00000415696 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
KARSP2-201ENST00000415696 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
KARSP2-201ENST00000415696 CCNB3Q8WWL7 1395 aa10.91□□□□□ -0.66
KARSP2-201ENST00000415696 PTPRGP23470 1445 aa10.9□□□□□ -0.66
KARSP2-201ENST00000415696 SUPT6HQ7KZ85 1726 aaKnown RBP10.9□□□□□ -0.67
KARSP2-201ENST00000415696 NUP153P49790 1475 aaKnown RBP10.89□□□□□ -0.67
KARSP2-201ENST00000415696 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
KARSP2-201ENST00000415696 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
KARSP2-201ENST00000415696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.88□□□□□ -0.67
KARSP2-201ENST00000415696 ABCA8O94911 1581 aa10.87□□□□□ -0.67
KARSP2-201ENST00000415696 LRRIQ1Q96JM4 1722 aa10.87□□□□□ -0.67
KARSP2-201ENST00000415696 HRCP23327 699 aa10.87□□□□□ -0.67
KARSP2-201ENST00000415696 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
KARSP2-201ENST00000415696 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
KARSP2-201ENST00000415696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
KARSP2-201ENST00000415696 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
KARSP2-201ENST00000415696 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
KARSP2-201ENST00000415696 PHLDB1Q86UU1 1377 aa10.85□□□□□ -0.67
KARSP2-201ENST00000415696 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
KARSP2-201ENST00000415696 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
KARSP2-201ENST00000415696 UACAQ9BZF9 1416 aa10.84□□□□□ -0.67
KARSP2-201ENST00000415696 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
KARSP2-201ENST00000415696 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
KARSP2-201ENST00000415696 TROQ12816 1431 aaPredicted RBP10.83□□□□□ -0.68
KARSP2-201ENST00000415696 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
KARSP2-201ENST00000415696 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
KARSP2-201ENST00000415696 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
KARSP2-201ENST00000415696 MAGI3Q5TCQ9 1506 aa10.8□□□□□ -0.68
KARSP2-201ENST00000415696 ABCC2Q92887 1545 aa10.8□□□□□ -0.68
KARSP2-201ENST00000415696 UHRF1BP1LA0JNW5 1464 aa10.8□□□□□ -0.68
KARSP2-201ENST00000415696 FAM50AQ14320 339 aaKnown RBP10.8□□□□□ -0.68
KARSP2-201ENST00000415696 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
KARSP2-201ENST00000415696 CCER1Q8TC90 406 aaPredicted RBP10.79□□□□□ -0.68
KARSP2-201ENST00000415696 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
KARSP2-201ENST00000415696 ATP10BO94823 1461 aa10.78□□□□□ -0.68
KARSP2-201ENST00000415696 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
KARSP2-201ENST00000415696 KIF14Q15058 1648 aa10.77□□□□□ -0.68
KARSP2-201ENST00000415696 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
KARSP2-201ENST00000415696 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
KARSP2-201ENST00000415696 ERCC6L2Q5T890 1561 aa10.76□□□□□ -0.69
KARSP2-201ENST00000415696 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
KARSP2-201ENST00000415696 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
KARSP2-201ENST00000415696 ITGAEP38570 1179 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms