RNA–Protein interactions for RNA: ENST00000415696.1

KARSP2-201, Transcript of lysyl-tRNA synthetase pseudogene 2, humanhuman

BASIC

Gene KARSP2, Length 1,639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP2-201ENST00000415696 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
KARSP2-201ENST00000415696 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
KARSP2-201ENST00000415696 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.09
KARSP2-201ENST00000415696 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
KARSP2-201ENST00000415696 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.22
KARSP2-201ENST00000415696 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
KARSP2-201ENST00000415696 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
KARSP2-201ENST00000415696 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
KARSP2-201ENST00000415696 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
KARSP2-201ENST00000415696 ABCC9O60706 1549 aa13.36□□□□□ -0.27
KARSP2-201ENST00000415696 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
KARSP2-201ENST00000415696 NACADO15069 1562 aa13.27□□□□□ -0.29
KARSP2-201ENST00000415696 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
KARSP2-201ENST00000415696 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
KARSP2-201ENST00000415696 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
KARSP2-201ENST00000415696 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
KARSP2-201ENST00000415696 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
KARSP2-201ENST00000415696 SUPT5HO00267 1087 aaKnown RBP12.7□□□□□ -0.38
KARSP2-201ENST00000415696 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
KARSP2-201ENST00000415696 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
KARSP2-201ENST00000415696 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
KARSP2-201ENST00000415696 PABPN1Q86U42 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
KARSP2-201ENST00000415696 CECR2Q9BXF3 1484 aa12.55□□□□□ -0.4
KARSP2-201ENST00000415696 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
KARSP2-201ENST00000415696 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
KARSP2-201ENST00000415696 WIZO95785 1651 aa12.39□□□□□ -0.43
KARSP2-201ENST00000415696 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
KARSP2-201ENST00000415696 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
KARSP2-201ENST00000415696 TOP2AP11388 1531 aaKnown RBP12.35□□□□□ -0.43
KARSP2-201ENST00000415696 FOXD1Q16676 465 aa12.32□□□□□ -0.44
KARSP2-201ENST00000415696 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
KARSP2-201ENST00000415696 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
KARSP2-201ENST00000415696 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
KARSP2-201ENST00000415696 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
KARSP2-201ENST00000415696 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
KARSP2-201ENST00000415696 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
KARSP2-201ENST00000415696 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
KARSP2-201ENST00000415696 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
KARSP2-201ENST00000415696 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
KARSP2-201ENST00000415696 ADRA2BP18089 450 aa11.97□□□□□ -0.49
KARSP2-201ENST00000415696 CFTRP13569 1480 aa11.93□□□□□ -0.5
KARSP2-201ENST00000415696 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.51
KARSP2-201ENST00000415696 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
KARSP2-201ENST00000415696 PRDM2Q13029 1718 aa11.87□□□□□ -0.51
KARSP2-201ENST00000415696 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
KARSP2-201ENST00000415696 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
KARSP2-201ENST00000415696 EEA1Q15075 1411 aa11.8□□□□□ -0.52
KARSP2-201ENST00000415696 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
KARSP2-201ENST00000415696 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
KARSP2-201ENST00000415696 BIVM-ERCC5R4GMW8 1640 aa11.76□□□□□ -0.53
KARSP2-201ENST00000415696 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
KARSP2-201ENST00000415696 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
KARSP2-201ENST00000415696 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.54
KARSP2-201ENST00000415696 CUX1P39880 1505 aa11.7□□□□□ -0.54
KARSP2-201ENST00000415696 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
KARSP2-201ENST00000415696 NESP48681 1621 aa11.68□□□□□ -0.54
KARSP2-201ENST00000415696 DNAJC5BQ9UF47 199 aa11.68□□□□□ -0.54
KARSP2-201ENST00000415696 DNMBPQ6XZF7 1577 aa11.66□□□□□ -0.54
KARSP2-201ENST00000415696 SOGA1O94964 1423 aa11.66□□□□□ -0.54
KARSP2-201ENST00000415696 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
KARSP2-201ENST00000415696 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
KARSP2-201ENST00000415696 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
KARSP2-201ENST00000415696 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
KARSP2-201ENST00000415696 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
KARSP2-201ENST00000415696 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
KARSP2-201ENST00000415696 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
KARSP2-201ENST00000415696 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
KARSP2-201ENST00000415696 KIF21BO75037 1637 aa11.57□□□□□ -0.56
KARSP2-201ENST00000415696 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
KARSP2-201ENST00000415696 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
KARSP2-201ENST00000415696 URB2Q14146 1524 aaKnown RBP11.56□□□□□ -0.56
KARSP2-201ENST00000415696 POLA1P09884 1462 aaPredicted RBP11.55□□□□□ -0.56
KARSP2-201ENST00000415696 CUX2O14529 1486 aa11.54□□□□□ -0.56
KARSP2-201ENST00000415696 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
KARSP2-201ENST00000415696 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
KARSP2-201ENST00000415696 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
KARSP2-201ENST00000415696 ERICH3Q5RHP9 1530 aa11.53□□□□□ -0.56
KARSP2-201ENST00000415696 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
KARSP2-201ENST00000415696 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
KARSP2-201ENST00000415696 WDR62O43379 1518 aa11.49□□□□□ -0.57
KARSP2-201ENST00000415696 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
KARSP2-201ENST00000415696 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
KARSP2-201ENST00000415696 IGF1RP08069 1367 aa11.45□□□□□ -0.58
KARSP2-201ENST00000415696 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
KARSP2-201ENST00000415696 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
KARSP2-201ENST00000415696 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
KARSP2-201ENST00000415696 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
KARSP2-201ENST00000415696 CUL7Q14999 1698 aa11.43□□□□□ -0.58
KARSP2-201ENST00000415696 CARMIL1Q5VZK9 1371 aa11.42□□□□□ -0.58
KARSP2-201ENST00000415696 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
KARSP2-201ENST00000415696 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
KARSP2-201ENST00000415696 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
KARSP2-201ENST00000415696 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
KARSP2-201ENST00000415696 CLIP1P30622 1438 aa11.37□□□□□ -0.59
KARSP2-201ENST00000415696 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
KARSP2-201ENST00000415696 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
KARSP2-201ENST00000415696 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
KARSP2-201ENST00000415696 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
KARSP2-201ENST00000415696 MSH5O43196 834 aa11.31□□□□□ -0.6
KARSP2-201ENST00000415696 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms