RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 CTTNBP2Q8WZ74 1663 aa29.58■■■□□ 2.33
PPM1N-206ENST00000415077 ADAMTS12P58397 1594 aa29.56■■■□□ 2.32
PPM1N-206ENST00000415077 APLP2Q06481 763 aa29.54■■■□□ 2.32
PPM1N-206ENST00000415077 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.31
PPM1N-206ENST00000415077 SNAPC4Q5SXM2 1469 aa29.48■■■□□ 2.31
PPM1N-206ENST00000415077 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
PPM1N-206ENST00000415077 P3H3Q8IVL6 736 aa29.42■■■□□ 2.3
PPM1N-206ENST00000415077 MAGI1Q96QZ7 1491 aaPredicted RBP29.41■■■□□ 2.3
PPM1N-206ENST00000415077 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
PPM1N-206ENST00000415077 GRIN2AQ12879 1464 aa29.33■■■□□ 2.29
PPM1N-206ENST00000415077 CHMP7Q8WUX9 453 aaPredicted RBP29.32■■■□□ 2.28
PPM1N-206ENST00000415077 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
PPM1N-206ENST00000415077 IQGAP2Q13576 1575 aa29.3■■■□□ 2.28
PPM1N-206ENST00000415077 SAMD9Q5K651 1589 aa29.29■■■□□ 2.28
PPM1N-206ENST00000415077 FBLN2P98095 1184 aa29.26■■■□□ 2.27
PPM1N-206ENST00000415077 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
PPM1N-206ENST00000415077 FMN1Q68DA7 1419 aa29.22■■■□□ 2.27
PPM1N-206ENST00000415077 KANK4Q5T7N3 995 aaPredicted RBP29.21■■■□□ 2.27
PPM1N-206ENST00000415077 PCF11O94913 1555 aaKnown RBP29.18■■■□□ 2.26
PPM1N-206ENST00000415077 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
PPM1N-206ENST00000415077 ATP1B4Q9UN42 357 aaPredicted RBP29.15■■■□□ 2.26
PPM1N-206ENST00000415077 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
PPM1N-206ENST00000415077 FYCO1Q9BQS8 1478 aa29.15■■■□□ 2.26
PPM1N-206ENST00000415077 UGGT2Q9NYU1 1516 aa29.14■■■□□ 2.26
PPM1N-206ENST00000415077 TIAM1Q13009 1591 aa29.12■■■□□ 2.25
PPM1N-206ENST00000415077 CEP170Q5SW79 1584 aa29.12■■■□□ 2.25
PPM1N-206ENST00000415077 HRCP23327 699 aa29.1■■■□□ 2.25
PPM1N-206ENST00000415077 NUP160Q12769 1436 aa29.09■■■□□ 2.25
PPM1N-206ENST00000415077 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
PPM1N-206ENST00000415077 LRRC9Q6ZRR7 1453 aa29.01■■■□□ 2.23
PPM1N-206ENST00000415077 DISP1Q96F81 1524 aa29.01■■■□□ 2.23
PPM1N-206ENST00000415077 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
PPM1N-206ENST00000415077 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
PPM1N-206ENST00000415077 CHD1O14646 1710 aa28.92■■■□□ 2.22
PPM1N-206ENST00000415077 CARMIL2Q6F5E8 1435 aa28.88■■■□□ 2.21
PPM1N-206ENST00000415077 LRRIQ1Q96JM4 1722 aa28.87■■■□□ 2.21
PPM1N-206ENST00000415077 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
PPM1N-206ENST00000415077 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
PPM1N-206ENST00000415077 HECW1Q76N89 1606 aa28.85■■■□□ 2.21
PPM1N-206ENST00000415077 CCDC18Q5T9S5 1454 aa28.83■■■□□ 2.21
PPM1N-206ENST00000415077 MTUS2Q5JR59 1369 aa28.81■■■□□ 2.2
PPM1N-206ENST00000415077 CCNB3Q8WWL7 1395 aa28.8■■■□□ 2.2
PPM1N-206ENST00000415077 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
PPM1N-206ENST00000415077 EPRSP07814 1512 aaKnown RBP28.77■■■□□ 2.2
PPM1N-206ENST00000415077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.75■■■□□ 2.19
PPM1N-206ENST00000415077 RAPGEF6Q8TEU7 1601 aa28.73■■■□□ 2.19
PPM1N-206ENST00000415077 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
PPM1N-206ENST00000415077 ZEB1P37275 1124 aaPredicted RBP28.7■■■□□ 2.19
PPM1N-206ENST00000415077 ARID3CA6NKF2 412 aa28.7■■■□□ 2.18
PPM1N-206ENST00000415077 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
PPM1N-206ENST00000415077 EHBP1L1Q8N3D4 1523 aa28.69■■■□□ 2.18
PPM1N-206ENST00000415077 NUP153P49790 1475 aaKnown RBP28.68■■■□□ 2.18
PPM1N-206ENST00000415077 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
PPM1N-206ENST00000415077 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
PPM1N-206ENST00000415077 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
PPM1N-206ENST00000415077 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
PPM1N-206ENST00000415077 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
PPM1N-206ENST00000415077 NCOA2Q15596 1464 aa28.63■■■□□ 2.17
PPM1N-206ENST00000415077 FAM50AQ14320 339 aaKnown RBP28.59■■■□□ 2.17
PPM1N-206ENST00000415077 PTPRGP23470 1445 aa28.58■■■□□ 2.17
PPM1N-206ENST00000415077 ITGAEP38570 1179 aa28.58■■■□□ 2.17
PPM1N-206ENST00000415077 CDK11AQ9UQ88 783 aaPredicted RBP28.57■■■□□ 2.16
PPM1N-206ENST00000415077 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
PPM1N-206ENST00000415077 FGD6Q6ZV73 1430 aa28.55■■■□□ 2.16
PPM1N-206ENST00000415077 ABCA8O94911 1581 aa28.54■■■□□ 2.16
PPM1N-206ENST00000415077 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
PPM1N-206ENST00000415077 MYOM3Q5VTT5 1437 aa28.53■■■□□ 2.16
PPM1N-206ENST00000415077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.52■■■□□ 2.16
PPM1N-206ENST00000415077 ERCC6L2Q5T890 1561 aa28.47■■■□□ 2.15
PPM1N-206ENST00000415077 TROQ12816 1431 aaPredicted RBP28.42■■■□□ 2.14
PPM1N-206ENST00000415077 ATP10BO94823 1461 aa28.41■■■□□ 2.14
PPM1N-206ENST00000415077 UACAQ9BZF9 1416 aa28.4■■■□□ 2.14
PPM1N-206ENST00000415077 PLEKHD1A6NEE1 506 aa28.37■■■□□ 2.13
PPM1N-206ENST00000415077 PTPN23Q9H3S7 1636 aa28.37■■■□□ 2.13
PPM1N-206ENST00000415077 MIA2Q96PC5 1412 aa28.35■■■□□ 2.13
PPM1N-206ENST00000415077 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
PPM1N-206ENST00000415077 TCOF1Q13428 1488 aaKnown RBP28.3■■■□□ 2.12
PPM1N-206ENST00000415077 SETD5Q9C0A6 1442 aa28.29■■■□□ 2.12
PPM1N-206ENST00000415077 ADCY10Q96PN6 1610 aa28.28■■■□□ 2.12
PPM1N-206ENST00000415077 ABCC2Q92887 1545 aa28.28■■■□□ 2.12
PPM1N-206ENST00000415077 RAB3GAP2Q9H2M9 1393 aa28.27■■■□□ 2.12
PPM1N-206ENST00000415077 KIF14Q15058 1648 aa28.26■■■□□ 2.12
PPM1N-206ENST00000415077 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
PPM1N-206ENST00000415077 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
PPM1N-206ENST00000415077 GPATCH8Q9UKJ3 1502 aaKnown RBP28.19■■■□□ 2.1
PPM1N-206ENST00000415077 UHRF1BP1LA0JNW5 1464 aa28.19■■■□□ 2.1
PPM1N-206ENST00000415077 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
PPM1N-206ENST00000415077 ITSN2Q9NZM3 1697 aa28.18■■■□□ 2.1
PPM1N-206ENST00000415077 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
PPM1N-206ENST00000415077 ABCC10Q5T3U5 1492 aa28.14■■■□□ 2.1
PPM1N-206ENST00000415077 ZNF644Q9H582 1327 aaPredicted RBP28.14■■■□□ 2.1
PPM1N-206ENST00000415077 HFM1A2PYH4 1435 aa28.13■■■□□ 2.09
PPM1N-206ENST00000415077 CHIC2Q9UKJ5 165 aa28.1■■■□□ 2.09
PPM1N-206ENST00000415077 KDM5BQ9UGL1 1544 aa28.09■■■□□ 2.09
PPM1N-206ENST00000415077 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
PPM1N-206ENST00000415077 ZCCHC11Q5TAX3 1644 aaKnown RBP28.08■■■□□ 2.09
PPM1N-206ENST00000415077 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
PPM1N-206ENST00000415077 CAMSAP2Q08AD1 1489 aa28.07■■■□□ 2.08
PPM1N-206ENST00000415077 NAIPQ13075 1403 aa28.07■■■□□ 2.08
PPM1N-206ENST00000415077 DAPK1P53355 1430 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms