RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 CARMIL1Q5VZK9 1371 aa42.94■■■■■ 4.46
C2orf88-204ENST00000409870 ERCC6L2Q5T890 1561 aa42.92■■■■■ 4.46
C2orf88-204ENST00000409870 TRHP20396 242 aaPredicted RBP42.8■■■■■ 4.44
C2orf88-204ENST00000409870 RAPGEF2Q9Y4G8 1499 aa42.77■■■■■ 4.44
C2orf88-204ENST00000409870 PRXQ9BXM0 1461 aa42.75■■■■■ 4.43
C2orf88-204ENST00000409870 CSRNP3Q8WYN3 585 aa42.74■■■■■ 4.43
C2orf88-204ENST00000409870 FAM9AQ8IZU1 332 aaPredicted RBP42.67■■■■■ 4.42
C2orf88-204ENST00000409870 PRG4Q92954 1404 aaPredicted RBP42.62■■■■■ 4.41
C2orf88-204ENST00000409870 JPH4Q96JJ6 628 aa42.55■■■■■ 4.4
C2orf88-204ENST00000409870 KIAA0586Q9BVV6 1533 aa42.53■■■■■ 4.4
C2orf88-204ENST00000409870 KIF21BO75037 1637 aa42.51■■■■■ 4.4
C2orf88-204ENST00000409870 CTTNBP2Q8WZ74 1663 aa42.41■■■■■ 4.38
C2orf88-204ENST00000409870 IQGAP2Q13576 1575 aa42.39■■■■■ 4.38
C2orf88-204ENST00000409870 GOLGA3Q08378 1498 aa42.25■■■■■ 4.35
C2orf88-204ENST00000409870 ADCY10Q96PN6 1610 aa42.18■■■■■ 4.34
C2orf88-204ENST00000409870 UGGT2Q9NYU1 1516 aa42.18■■■■■ 4.34
C2orf88-204ENST00000409870 KIF13AQ9H1H9 1805 aa42.13■■■■■ 4.34
C2orf88-204ENST00000409870 MAPKBP1O60336 1514 aa42.06■■■■■ 4.32
C2orf88-204ENST00000409870 DISP1Q96F81 1524 aa42.05■■■■■ 4.32
C2orf88-204ENST00000409870 CARMIL2Q6F5E8 1435 aa42.05■■■■■ 4.32
C2orf88-204ENST00000409870 EHMT2Q96KQ7 1210 aa42.04■■■■■ 4.32
C2orf88-204ENST00000409870 KIAA0556O60303 1618 aa42■■■■■ 4.31
C2orf88-204ENST00000409870 NPM1P06748 294 aaKnown RBP eCLIP41.99■■■■■ 4.31
C2orf88-204ENST00000409870 UBTFP17480 764 aaKnown RBP41.99■■■■■ 4.31
C2orf88-204ENST00000409870 PTPRGP23470 1445 aa41.97■■■■■ 4.31
C2orf88-204ENST00000409870 TNIKQ9UKE5 1360 aa41.96■■■■■ 4.31
C2orf88-204ENST00000409870 ABCC10Q5T3U5 1492 aa41.93■■■■■ 4.3
C2orf88-204ENST00000409870 DIP2BQ9P265 1576 aa41.91■■■■■ 4.3
C2orf88-204ENST00000409870 SAMD9Q5K651 1589 aa41.89■■■■■ 4.3
C2orf88-204ENST00000409870 TTBK1Q5TCY1 1321 aaPredicted RBP41.83■■■■■ 4.29
C2orf88-204ENST00000409870 EFCAB5A4FU69 1503 aa41.78■■■■■ 4.28
C2orf88-204ENST00000409870 ABCC2Q92887 1545 aa41.78■■■■■ 4.28
C2orf88-204ENST00000409870 FAM69CQ0P6D2 419 aa41.78■■■■■ 4.28
C2orf88-204ENST00000409870 UHRF1BP1LA0JNW5 1464 aa41.75■■■■■ 4.27
C2orf88-204ENST00000409870 RANGAP1P46060 587 aaPredicted RBP41.71■■■■■ 4.27
C2orf88-204ENST00000409870 UACAQ9BZF9 1416 aa41.7■■■■■ 4.27
C2orf88-204ENST00000409870 P3H3Q8IVL6 736 aa41.63■■■■■ 4.26
C2orf88-204ENST00000409870 ARHGAP35Q9NRY4 1499 aa41.6■■■■■ 4.25
C2orf88-204ENST00000409870 FHOD3Q2V2M9 1422 aa41.59■■■■■ 4.25
C2orf88-204ENST00000409870 LOC105371045A0A1W2PR82 267 aa41.59■■■■■ 4.25
C2orf88-204ENST00000409870 ASXL2Q76L83 1435 aa41.57■■■■■ 4.25
C2orf88-204ENST00000409870 TSPOAP1O95153 1857 aa41.57■■■■■ 4.24
C2orf88-204ENST00000409870 PLB1Q6P1J6 1458 aa41.56■■■■■ 4.24
C2orf88-204ENST00000409870 KDM5BQ9UGL1 1544 aa41.55■■■■■ 4.24
C2orf88-204ENST00000409870 ZCCHC11Q5TAX3 1644 aaKnown RBP41.53■■■■■ 4.24
C2orf88-204ENST00000409870 ABCA8O94911 1581 aa41.5■■■■■ 4.23
C2orf88-204ENST00000409870 CLIP1P30622 1438 aa41.48■■■■■ 4.23
C2orf88-204ENST00000409870 GLI2P10070 1586 aa41.47■■■■■ 4.23
C2orf88-204ENST00000409870 KDM6BO15054 1643 aa41.45■■■■■ 4.23
C2orf88-204ENST00000409870 CEP162Q5TB80 1403 aa41.42■■■■■ 4.22
C2orf88-204ENST00000409870 RAPGEF6Q8TEU7 1601 aa41.37■■■■■ 4.21
C2orf88-204ENST00000409870 PPRC1Q5VV67 1664 aaKnown RBP41.37■■■■■ 4.21
C2orf88-204ENST00000409870 EPRSP07814 1512 aaKnown RBP41.35■■■■■ 4.21
C2orf88-204ENST00000409870 FMN1Q68DA7 1419 aa41.33■■■■■ 4.21
C2orf88-204ENST00000409870 MAP3K4Q9Y6R4 1608 aa41.29■■■■■ 4.2
C2orf88-204ENST00000409870 WDR7Q9Y4E6 1490 aa41.27■■■■■ 4.2
C2orf88-204ENST00000409870 AEBP2Q6ZN18 517 aaPredicted RBP41.26■■■■■ 4.19
C2orf88-204ENST00000409870 NUP153P49790 1475 aaKnown RBP41.21■■■■■ 4.19
C2orf88-204ENST00000409870 HECW1Q76N89 1606 aa41.13■■■■■ 4.18
C2orf88-204ENST00000409870 PCF11O94913 1555 aaKnown RBP41.12■■■■■ 4.17
C2orf88-204ENST00000409870 ATP10BO94823 1461 aa41.11■■■■■ 4.17
C2orf88-204ENST00000409870 TEX14Q8IWB6 1497 aa41.11■■■■■ 4.17
C2orf88-204ENST00000409870 CASKIN1Q8WXD9 1431 aa41.07■■■■■ 4.16
C2orf88-204ENST00000409870 CFAP43Q8NDM7 1665 aa41.06■■■■■ 4.16
C2orf88-204ENST00000409870 ARID3CA6NKF2 412 aa41.03■■■■■ 4.16
C2orf88-204ENST00000409870 FYCO1Q9BQS8 1478 aa41.02■■■■■ 4.16
C2orf88-204ENST00000409870 LRRIQ1Q96JM4 1722 aa40.97■■■■■ 4.15
C2orf88-204ENST00000409870 CDK13Q14004 1512 aaKnown RBP40.96■■■■■ 4.15
C2orf88-204ENST00000409870 COL17A1Q9UMD9 1497 aaPredicted RBP40.93■■■■■ 4.14
C2orf88-204ENST00000409870 MAGI3Q5TCQ9 1506 aa40.93■■■■■ 4.14
C2orf88-204ENST00000409870 ATP1B4Q9UN42 357 aaPredicted RBP40.93■■■■■ 4.14
C2orf88-204ENST00000409870 CD109Q6YHK3 1445 aa40.92■■■■■ 4.14
C2orf88-204ENST00000409870 KCNH8Q96L42 1107 aa40.91■■■■■ 4.14
C2orf88-204ENST00000409870 VPS8Q8N3P4 1428 aa40.9■■■■■ 4.14
C2orf88-204ENST00000409870 CCDC18Q5T9S5 1454 aa40.88■■■■■ 4.13
C2orf88-204ENST00000409870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.87■■■■■ 4.13
C2orf88-204ENST00000409870 HNRNPUL2Q1KMD3 747 aaKnown RBP40.87■■■■■ 4.13
C2orf88-204ENST00000409870 ABCA9Q8IUA7 1624 aa40.79■■■■■ 4.12
C2orf88-204ENST00000409870 PLEKHD1A6NEE1 506 aa40.73■■■■■ 4.11
C2orf88-204ENST00000409870 KDM4FA0A1W2PPD8 638 aa40.71■■■■■ 4.11
C2orf88-204ENST00000409870 CDK11AQ9UQ88 783 aaPredicted RBP40.68■■■■■ 4.1
C2orf88-204ENST00000409870 TROQ12816 1431 aaPredicted RBP40.63■■■■■ 4.09
C2orf88-204ENST00000409870 ADGRL1O94910 1474 aa40.6■■■■■ 4.09
C2orf88-204ENST00000409870 ARAP3Q8WWN8 1544 aa40.58■■■■■ 4.09
C2orf88-204ENST00000409870 TIAM1Q13009 1591 aa40.57■■■■■ 4.08
C2orf88-204ENST00000409870 KIF14Q15058 1648 aa40.54■■■■■ 4.08
C2orf88-204ENST00000409870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.52■■■■■ 4.08
C2orf88-204ENST00000409870 MAP3K1Q13233 1512 aa40.51■■■■■ 4.08
C2orf88-204ENST00000409870 PHLDB1Q86UU1 1377 aa40.5■■■■■ 4.07
C2orf88-204ENST00000409870 TTC37Q6PGP7 1564 aa40.5■■■■■ 4.07
C2orf88-204ENST00000409870 NEO1Q92859 1461 aa40.5■■■■■ 4.07
C2orf88-204ENST00000409870 EHBP1L1Q8N3D4 1523 aa40.46■■■■■ 4.07
C2orf88-204ENST00000409870 MTUS2Q5JR59 1369 aa40.44■■■■■ 4.06
C2orf88-204ENST00000409870 CFAP74Q9C0B2 1584 aa40.37■■■■■ 4.05
C2orf88-204ENST00000409870 LRRC9Q6ZRR7 1453 aa40.35■■■■■ 4.05
C2orf88-204ENST00000409870 FRMPD1Q5SYB0 1578 aa40.34■■■■■ 4.05
C2orf88-204ENST00000409870 MYO5CQ9NQX4 1742 aa40.33■■■■■ 4.05
C2orf88-204ENST00000409870 APLP2Q06481 763 aa40.31■■■■■ 4.04
C2orf88-204ENST00000409870 FANCAO15360 1455 aa40.27■■■■■ 4.04
C2orf88-204ENST00000409870 SUPT6HQ7KZ85 1726 aaKnown RBP40.27■■■■■ 4.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms