RNA–Protein interactions for RNA: ENST00000407246.6

SCP2-204, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-204ENST00000407246 APLP2Q06481 763 aa25■■□□□ 1.59
SCP2-204ENST00000407246 GTF3C3Q9Y5Q9 886 aa24.9■■□□□ 1.58
SCP2-204ENST00000407246 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
SCP2-204ENST00000407246 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.58
SCP2-204ENST00000407246 WDR62O43379 1518 aa24.89■■□□□ 1.57
SCP2-204ENST00000407246 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
SCP2-204ENST00000407246 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
SCP2-204ENST00000407246 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
SCP2-204ENST00000407246 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
SCP2-204ENST00000407246 PBRM1Q86U86 1689 aa24.83■■□□□ 1.57
SCP2-204ENST00000407246 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
SCP2-204ENST00000407246 ZNF608Q9ULD9 1512 aaPredicted RBP24.82■■□□□ 1.56
SCP2-204ENST00000407246 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
SCP2-204ENST00000407246 FHOD3Q2V2M9 1422 aa24.77■■□□□ 1.56
SCP2-204ENST00000407246 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
SCP2-204ENST00000407246 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
SCP2-204ENST00000407246 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
SCP2-204ENST00000407246 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
SCP2-204ENST00000407246 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
SCP2-204ENST00000407246 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
SCP2-204ENST00000407246 PCF11O94913 1555 aaKnown RBP24.69■■□□□ 1.54
SCP2-204ENST00000407246 TIAM1Q13009 1591 aa24.66■■□□□ 1.54
SCP2-204ENST00000407246 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
SCP2-204ENST00000407246 ATP1B4Q9UN42 357 aaPredicted RBP24.64■■□□□ 1.54
SCP2-204ENST00000407246 SAMD9Q5K651 1589 aa24.62■■□□□ 1.53
SCP2-204ENST00000407246 YTHDC1Q96MU7 727 aaKnown RBP24.62■■□□□ 1.53
SCP2-204ENST00000407246 SNAPC4Q5SXM2 1469 aa24.59■■□□□ 1.53
SCP2-204ENST00000407246 MAP3K1Q13233 1512 aa24.59■■□□□ 1.53
SCP2-204ENST00000407246 MIER1Q8N108 512 aa24.57■■□□□ 1.52
SCP2-204ENST00000407246 CASKIN1Q8WXD9 1431 aa24.55■■□□□ 1.52
SCP2-204ENST00000407246 LRRC9Q6ZRR7 1453 aa24.55■■□□□ 1.52
SCP2-204ENST00000407246 CFAP43Q8NDM7 1665 aa24.55■■□□□ 1.52
SCP2-204ENST00000407246 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
SCP2-204ENST00000407246 FMN1Q68DA7 1419 aa24.53■■□□□ 1.52
SCP2-204ENST00000407246 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
SCP2-204ENST00000407246 IQGAP2Q13576 1575 aa24.52■■□□□ 1.52
SCP2-204ENST00000407246 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
SCP2-204ENST00000407246 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
SCP2-204ENST00000407246 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
SCP2-204ENST00000407246 PHLDB1Q86UU1 1377 aa24.44■■□□□ 1.5
SCP2-204ENST00000407246 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
SCP2-204ENST00000407246 FBLN2P98095 1184 aa24.38■■□□□ 1.49
SCP2-204ENST00000407246 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
SCP2-204ENST00000407246 KIAA0586Q9BVV6 1533 aa24.38■■□□□ 1.49
SCP2-204ENST00000407246 ITGAEP38570 1179 aa24.38■■□□□ 1.49
SCP2-204ENST00000407246 UGGT2Q9NYU1 1516 aa24.37■■□□□ 1.49
SCP2-204ENST00000407246 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
SCP2-204ENST00000407246 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
SCP2-204ENST00000407246 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
SCP2-204ENST00000407246 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
SCP2-204ENST00000407246 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
SCP2-204ENST00000407246 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
SCP2-204ENST00000407246 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
SCP2-204ENST00000407246 ARID3CA6NKF2 412 aa24.25■■□□□ 1.47
SCP2-204ENST00000407246 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
SCP2-204ENST00000407246 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
SCP2-204ENST00000407246 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
SCP2-204ENST00000407246 NUP160Q12769 1436 aa24.22■■□□□ 1.47
SCP2-204ENST00000407246 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.47
SCP2-204ENST00000407246 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.46
SCP2-204ENST00000407246 CCDC18Q5T9S5 1454 aa24.2■■□□□ 1.46
SCP2-204ENST00000407246 NCOA2Q15596 1464 aa24.18■■□□□ 1.46
SCP2-204ENST00000407246 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
SCP2-204ENST00000407246 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
SCP2-204ENST00000407246 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
SCP2-204ENST00000407246 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
SCP2-204ENST00000407246 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
SCP2-204ENST00000407246 RAPGEF6Q8TEU7 1601 aa24.09■■□□□ 1.45
SCP2-204ENST00000407246 NUP153P49790 1475 aaKnown RBP24.09■■□□□ 1.45
SCP2-204ENST00000407246 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
SCP2-204ENST00000407246 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
SCP2-204ENST00000407246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.07■■□□□ 1.44
SCP2-204ENST00000407246 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
SCP2-204ENST00000407246 SETD5Q9C0A6 1442 aa24.06■■□□□ 1.44
SCP2-204ENST00000407246 CHD1O14646 1710 aa24.05■■□□□ 1.44
SCP2-204ENST00000407246 CARMIL2Q6F5E8 1435 aa24.04■■□□□ 1.44
SCP2-204ENST00000407246 MYT1Q01538 1121 aa24.02■■□□□ 1.44
SCP2-204ENST00000407246 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
SCP2-204ENST00000407246 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SCP2-204ENST00000407246 PRG4Q92954 1404 aaPredicted RBP23.94■■□□□ 1.42
SCP2-204ENST00000407246 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
SCP2-204ENST00000407246 MAPKBP1O60336 1514 aa23.9■■□□□ 1.42
SCP2-204ENST00000407246 TCOF1Q13428 1488 aaKnown RBP23.89■■□□□ 1.42
SCP2-204ENST00000407246 ABCA8O94911 1581 aa23.89■■□□□ 1.41
SCP2-204ENST00000407246 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
SCP2-204ENST00000407246 TROQ12816 1431 aaPredicted RBP23.85■■□□□ 1.41
SCP2-204ENST00000407246 MIA2Q96PC5 1412 aa23.85■■□□□ 1.41
SCP2-204ENST00000407246 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
SCP2-204ENST00000407246 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
SCP2-204ENST00000407246 PTPRGP23470 1445 aa23.82■■□□□ 1.4
SCP2-204ENST00000407246 KIF14Q15058 1648 aa23.82■■□□□ 1.4
SCP2-204ENST00000407246 NAIPQ13075 1403 aa23.82■■□□□ 1.4
SCP2-204ENST00000407246 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
SCP2-204ENST00000407246 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
SCP2-204ENST00000407246 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
SCP2-204ENST00000407246 ATP10BO94823 1461 aa23.8■■□□□ 1.4
SCP2-204ENST00000407246 RRP7BPQ9NSQ0 103 aa23.79■■□□□ 1.4
SCP2-204ENST00000407246 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
SCP2-204ENST00000407246 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
SCP2-204ENST00000407246 ADCY10Q96PN6 1610 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms