RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CHIC2Q9UKJ5 165 aa6.6□□□□□ -1.35
PCDH11X-207ENST00000406881 RUSC2Q8N2Y8 1516 aa6.58□□□□□ -1.36
PCDH11X-207ENST00000406881 CARMIL2Q6F5E8 1435 aa6.58□□□□□ -1.36
PCDH11X-207ENST00000406881 CFDP1Q9UEE9 299 aaPredicted RBP6.58□□□□□ -1.36
PCDH11X-207ENST00000406881 PEG3Q9GZU2 1588 aa6.57□□□□□ -1.36
PCDH11X-207ENST00000406881 TIMELESSQ9UNS1 1208 aa6.57□□□□□ -1.36
PCDH11X-207ENST00000406881 ARHGAP35Q9NRY4 1499 aa6.57□□□□□ -1.36
PCDH11X-207ENST00000406881 FGD5Q6ZNL6 1462 aa6.57□□□□□ -1.36
PCDH11X-207ENST00000406881 IGF1RP08069 1367 aa6.56□□□□□ -1.36
PCDH11X-207ENST00000406881 RRP7BPQ9NSQ0 103 aa6.55□□□□□ -1.36
PCDH11X-207ENST00000406881 KIF21BO75037 1637 aa6.55□□□□□ -1.36
PCDH11X-207ENST00000406881 SLC4A1APQ9BWU0 796 aaKnown RBP6.55□□□□□ -1.36
PCDH11X-207ENST00000406881 ERICH3Q5RHP9 1530 aa6.54□□□□□ -1.36
PCDH11X-207ENST00000406881 CNGB1Q14028 1251 aaPredicted RBP6.54□□□□□ -1.36
PCDH11X-207ENST00000406881 KANK4Q5T7N3 995 aaPredicted RBP6.54□□□□□ -1.36
PCDH11X-207ENST00000406881 SETD5Q9C0A6 1442 aa6.53□□□□□ -1.36
PCDH11X-207ENST00000406881 TOP2BQ02880 1626 aa6.53□□□□□ -1.36
PCDH11X-207ENST00000406881 SYNJ1O43426 1573 aa6.52□□□□□ -1.37
PCDH11X-207ENST00000406881 GAPVD1Q14C86 1478 aa6.52□□□□□ -1.37
PCDH11X-207ENST00000406881 CC2D2AQ9P2K1 1620 aa6.52□□□□□ -1.37
PCDH11X-207ENST00000406881 EIF4G2P78344 907 aaKnown RBP eCLIP6.52□□□□□ -1.37
PCDH11X-207ENST00000406881 FHOD3Q2V2M9 1422 aa6.51□□□□□ -1.37
PCDH11X-207ENST00000406881 DDX10Q13206 875 aaKnown RBP6.51□□□□□ -1.37
PCDH11X-207ENST00000406881 GTF3C3Q9Y5Q9 886 aa6.51□□□□□ -1.37
PCDH11X-207ENST00000406881 KCNH8Q96L42 1107 aa6.5□□□□□ -1.37
PCDH11X-207ENST00000406881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.5□□□□□ -1.37
PCDH11X-207ENST00000406881 ESF1Q9H501 851 aaKnown RBP6.5□□□□□ -1.37
PCDH11X-207ENST00000406881 PRXQ9BXM0 1461 aa6.49□□□□□ -1.37
PCDH11X-207ENST00000406881 UNC13AQ9UPW8 1703 aa6.49□□□□□ -1.37
PCDH11X-207ENST00000406881 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
PCDH11X-207ENST00000406881 CCDC18Q5T9S5 1454 aa6.49□□□□□ -1.37
PCDH11X-207ENST00000406881 CUX1P39880 1505 aa6.48□□□□□ -1.37
PCDH11X-207ENST00000406881 JPH4Q96JJ6 628 aa6.47□□□□□ -1.37
PCDH11X-207ENST00000406881 RSPH4AQ5TD94 716 aa6.47□□□□□ -1.37
PCDH11X-207ENST00000406881 TOPBP1Q92547 1522 aa6.47□□□□□ -1.37
PCDH11X-207ENST00000406881 DNMBPQ6XZF7 1577 aa6.47□□□□□ -1.37
PCDH11X-207ENST00000406881 CHGAP10645 457 aaKnown RBP6.47□□□□□ -1.37
PCDH11X-207ENST00000406881 RAB3GAP2Q9H2M9 1393 aa6.46□□□□□ -1.37
PCDH11X-207ENST00000406881 GRIN2BQ13224 1484 aa6.46□□□□□ -1.37
PCDH11X-207ENST00000406881 MRC2Q9UBG0 1479 aa6.46□□□□□ -1.37
PCDH11X-207ENST00000406881 MIER1Q8N108 512 aa6.46□□□□□ -1.38
PCDH11X-207ENST00000406881 LAMC3Q9Y6N6 1575 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 STAG3Q9UJ98 1225 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 KDM2AQ9Y2K7 1162 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 ANKRD30AQ9BXX3 1397 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 SIN3AQ96ST3 1273 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 IFT140Q96RY7 1462 aa6.45□□□□□ -1.38
PCDH11X-207ENST00000406881 EFCAB5A4FU69 1503 aa6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 POLA1P09884 1462 aaPredicted RBP6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 NEFMP07197 916 aa6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 DAXXQ9UER7 740 aaPredicted RBP6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 CASKIN1Q8WXD9 1431 aa6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 EFCAB2Q5VUJ9 269 aa6.44□□□□□ -1.38
PCDH11X-207ENST00000406881 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 NESP48681 1621 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 BCANQ96GW7 911 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 SLC24A1O60721 1099 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 ABCA10Q8WWZ4 1543 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 HNRNPUQ00839 825 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
PCDH11X-207ENST00000406881 KANK1Q14678 1352 aa6.42□□□□□ -1.38
PCDH11X-207ENST00000406881 PTPRGP23470 1445 aa6.42□□□□□ -1.38
PCDH11X-207ENST00000406881 FYCO1Q9BQS8 1478 aa6.42□□□□□ -1.38
PCDH11X-207ENST00000406881 MRS2Q9HD23 443 aa6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 LRRC9Q6ZRR7 1453 aa6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 AQRO60306 1485 aaKnown RBP eCLIP6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 MPHOSPH9Q99550 1183 aa6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 DHX57Q6P158 1386 aaKnown RBP6.41□□□□□ -1.38
PCDH11X-207ENST00000406881 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
PCDH11X-207ENST00000406881 BIVM-ERCC5R4GMW8 1640 aa6.4□□□□□ -1.38
PCDH11X-207ENST00000406881 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 PPP1R15AO75807 674 aaPredicted RBP6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 MYOM3Q5VTT5 1437 aa6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 FGD6Q6ZV73 1430 aa6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 PKD2Q13563 968 aa6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 HIRIP3Q9BW71 556 aaPredicted RBP6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 RRBP1Q9P2E9 1410 aaKnown RBP6.39□□□□□ -1.39
PCDH11X-207ENST00000406881 NUP155O75694 1391 aa6.38□□□□□ -1.39
PCDH11X-207ENST00000406881 CUL7Q14999 1698 aa6.37□□□□□ -1.39
PCDH11X-207ENST00000406881 CCER2I3L3R5 266 aa6.37□□□□□ -1.39
PCDH11X-207ENST00000406881 WDR43Q15061 677 aaKnown RBP eCLIP6.37□□□□□ -1.39
PCDH11X-207ENST00000406881 CANXP27824 592 aaKnown RBP6.37□□□□□ -1.39
PCDH11X-207ENST00000406881 FKBP8Q14318 412 aa6.36□□□□□ -1.39
PCDH11X-207ENST00000406881 PHLDB1Q86UU1 1377 aa6.36□□□□□ -1.39
PCDH11X-207ENST00000406881 MAP3K1Q13233 1512 aa6.36□□□□□ -1.39
PCDH11X-207ENST00000406881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.35□□□□□ -1.39
PCDH11X-207ENST00000406881 DCAF11Q8TEB1 546 aa6.35□□□□□ -1.39
PCDH11X-207ENST00000406881 NCOA2Q15596 1464 aa6.35□□□□□ -1.39
PCDH11X-207ENST00000406881 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.35□□□□□ -1.39
PCDH11X-207ENST00000406881 KIAA0586Q9BVV6 1533 aa6.35□□□□□ -1.39
PCDH11X-207ENST00000406881 EHBP1L1Q8N3D4 1523 aa6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 SPAG9O60271 1321 aaKnown RBP6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 TIAM1Q13009 1591 aa6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 HSPA5P11021 654 aaKnown RBP6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 HNRNPMP52272 730 aaKnown RBP eCLIP6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 TMF1P82094 1093 aa6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 KNSTRNQ9Y448 316 aa6.34□□□□□ -1.39
PCDH11X-207ENST00000406881 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms