RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 NISCHQ9Y2I1 1504 aa9.03□□□□□ -0.96
PCDH11X-207ENST00000406881 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
PCDH11X-207ENST00000406881 SUPT5HO00267 1087 aaKnown RBP8□□□□□ -1.13
PCDH11X-207ENST00000406881 SHROOM4Q9ULL8 1493 aa7.99□□□□□ -1.13
PCDH11X-207ENST00000406881 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
PCDH11X-207ENST00000406881 ZCCHC6Q5VYS8 1495 aaKnown RBP7.54□□□□□ -1.2
PCDH11X-207ENST00000406881 TRIM41Q8WV44 630 aa7.52□□□□□ -1.21
PCDH11X-207ENST00000406881 ABCC9O60706 1549 aa7.51□□□□□ -1.21
PCDH11X-207ENST00000406881 FAM9AQ8IZU1 332 aaPredicted RBP7.45□□□□□ -1.22
PCDH11X-207ENST00000406881 APLP2Q06481 763 aa7.44□□□□□ -1.22
PCDH11X-207ENST00000406881 EHMT2Q96KQ7 1210 aa7.42□□□□□ -1.22
PCDH11X-207ENST00000406881 CHIC1Q5VXU3 224 aa7.4□□□□□ -1.22
PCDH11X-207ENST00000406881 DCAF1Q9Y4B6 1507 aa7.35□□□□□ -1.23
PCDH11X-207ENST00000406881 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
PCDH11X-207ENST00000406881 PCGF6Q9BYE7 350 aa7.31□□□□□ -1.24
PCDH11X-207ENST00000406881 ZEB1P37275 1124 aaPredicted RBP7.3□□□□□ -1.24
PCDH11X-207ENST00000406881 PABPN1Q86U42 306 aaKnown RBP eCLIP7.29□□□□□ -1.24
PCDH11X-207ENST00000406881 NACADO15069 1562 aa7.29□□□□□ -1.24
PCDH11X-207ENST00000406881 SCRIBQ14160 1630 aa7.28□□□□□ -1.24
PCDH11X-207ENST00000406881 RB1CC1Q8TDY2 1594 aa7.27□□□□□ -1.25
PCDH11X-207ENST00000406881 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
PCDH11X-207ENST00000406881 LOC105371045A0A1W2PR82 267 aa7.19□□□□□ -1.26
PCDH11X-207ENST00000406881 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
PCDH11X-207ENST00000406881 RANGAP1P46060 587 aaPredicted RBP7.19□□□□□ -1.26
PCDH11X-207ENST00000406881 TTBK1Q5TCY1 1321 aaPredicted RBP7.17□□□□□ -1.26
PCDH11X-207ENST00000406881 CCER1Q8TC90 406 aaPredicted RBP7.16□□□□□ -1.26
PCDH11X-207ENST00000406881 RSF1Q96T23 1441 aaPredicted RBP7.14□□□□□ -1.27
PCDH11X-207ENST00000406881 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
PCDH11X-207ENST00000406881 PELP1Q8IZL8 1130 aaKnown RBP7.09□□□□□ -1.27
PCDH11X-207ENST00000406881 HRCP23327 699 aa7.09□□□□□ -1.27
PCDH11X-207ENST00000406881 CSRNP3Q8WYN3 585 aa7.08□□□□□ -1.28
PCDH11X-207ENST00000406881 BAZ1AQ9NRL2 1556 aaPredicted RBP7.07□□□□□ -1.28
PCDH11X-207ENST00000406881 PPARGC1BQ86YN6 1023 aaKnown RBP7.05□□□□□ -1.28
PCDH11X-207ENST00000406881 MYT1Q01538 1121 aa7.01□□□□□ -1.29
PCDH11X-207ENST00000406881 EEA1Q15075 1411 aa7.01□□□□□ -1.29
PCDH11X-207ENST00000406881 CENPBP07199 599 aaPredicted RBP7□□□□□ -1.29
PCDH11X-207ENST00000406881 CECR2Q9BXF3 1484 aa7□□□□□ -1.29
PCDH11X-207ENST00000406881 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
PCDH11X-207ENST00000406881 HNRNPUL2Q1KMD3 747 aaKnown RBP6.96□□□□□ -1.29
PCDH11X-207ENST00000406881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.95□□□□□ -1.3
PCDH11X-207ENST00000406881 MROH2BQ7Z745 1585 aa6.94□□□□□ -1.3
PCDH11X-207ENST00000406881 WRNQ14191 1432 aaPredicted RBP eCLIP6.93□□□□□ -1.3
PCDH11X-207ENST00000406881 ITGAEP38570 1179 aa6.93□□□□□ -1.3
PCDH11X-207ENST00000406881 SMARCA2P51531 1590 aa6.92□□□□□ -1.3
PCDH11X-207ENST00000406881 GOLGA3Q08378 1498 aa6.89□□□□□ -1.31
PCDH11X-207ENST00000406881 TOP2AP11388 1531 aaKnown RBP6.89□□□□□ -1.31
PCDH11X-207ENST00000406881 FAM50AQ14320 339 aaKnown RBP6.87□□□□□ -1.31
PCDH11X-207ENST00000406881 CCDC88BA6NC98 1476 aa6.87□□□□□ -1.31
PCDH11X-207ENST00000406881 TNIKQ9UKE5 1360 aa6.86□□□□□ -1.31
PCDH11X-207ENST00000406881 KIF27Q86VH2 1401 aa6.86□□□□□ -1.31
PCDH11X-207ENST00000406881 CEP164Q9UPV0 1460 aa6.86□□□□□ -1.31
PCDH11X-207ENST00000406881 CLIP1P30622 1438 aa6.85□□□□□ -1.31
PCDH11X-207ENST00000406881 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
PCDH11X-207ENST00000406881 CDK11AQ9UQ88 783 aaPredicted RBP6.83□□□□□ -1.32
PCDH11X-207ENST00000406881 WIZO95785 1651 aa6.83□□□□□ -1.32
PCDH11X-207ENST00000406881 CEP162Q5TB80 1403 aa6.83□□□□□ -1.32
PCDH11X-207ENST00000406881 FBLN2P98095 1184 aa6.82□□□□□ -1.32
PCDH11X-207ENST00000406881 ATAD2BQ9ULI0 1458 aa6.82□□□□□ -1.32
PCDH11X-207ENST00000406881 P3H3Q8IVL6 736 aa6.81□□□□□ -1.32
PCDH11X-207ENST00000406881 MYT1LQ9UL68 1186 aa6.8□□□□□ -1.32
PCDH11X-207ENST00000406881 NEFLP07196 543 aa6.79□□□□□ -1.32
PCDH11X-207ENST00000406881 DIEXFQ68CQ4 756 aaKnown RBP6.79□□□□□ -1.32
PCDH11X-207ENST00000406881 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
PCDH11X-207ENST00000406881 YTHDC1Q96MU7 727 aaKnown RBP6.76□□□□□ -1.33
PCDH11X-207ENST00000406881 SOGA1O94964 1423 aa6.75□□□□□ -1.33
PCDH11X-207ENST00000406881 ZNF316A6NFI3 1004 aaPredicted RBP6.75□□□□□ -1.33
PCDH11X-207ENST00000406881 CADPSQ9ULU8 1353 aa6.75□□□□□ -1.33
PCDH11X-207ENST00000406881 PDS5BQ9NTI5 1447 aa6.74□□□□□ -1.33
PCDH11X-207ENST00000406881 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
PCDH11X-207ENST00000406881 ACIN1Q9UKV3 1341 aaKnown RBP6.74□□□□□ -1.33
PCDH11X-207ENST00000406881 CUX2O14529 1486 aa6.73□□□□□ -1.33
PCDH11X-207ENST00000406881 MTUS2Q5JR59 1369 aa6.73□□□□□ -1.33
PCDH11X-207ENST00000406881 CHMP7Q8WUX9 453 aaPredicted RBP6.73□□□□□ -1.33
PCDH11X-207ENST00000406881 CARMIL1Q5VZK9 1371 aa6.73□□□□□ -1.33
PCDH11X-207ENST00000406881 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
PCDH11X-207ENST00000406881 NCAPD3P42695 1498 aa6.72□□□□□ -1.33
PCDH11X-207ENST00000406881 FHAD1B1AJZ9 1412 aa6.71□□□□□ -1.33
PCDH11X-207ENST00000406881 VPS8Q8N3P4 1428 aa6.69□□□□□ -1.34
PCDH11X-207ENST00000406881 ERCC6Q03468 1493 aa6.69□□□□□ -1.34
PCDH11X-207ENST00000406881 ARID3CA6NKF2 412 aa6.68□□□□□ -1.34
PCDH11X-207ENST00000406881 POLR3GLQ9BT43 218 aa6.68□□□□□ -1.34
PCDH11X-207ENST00000406881 ZNF777Q9ULD5 760 aaPredicted RBP6.67□□□□□ -1.34
PCDH11X-207ENST00000406881 EIF4G1Q04637 1599 aaKnown RBP6.67□□□□□ -1.34
PCDH11X-207ENST00000406881 TONSLQ96HA7 1378 aa6.66□□□□□ -1.34
PCDH11X-207ENST00000406881 ANP32CO43423 234 aa6.66□□□□□ -1.34
PCDH11X-207ENST00000406881 CLSPNQ9HAW4 1339 aa6.65□□□□□ -1.34
PCDH11X-207ENST00000406881 NPM1P06748 294 aaKnown RBP eCLIP6.65□□□□□ -1.35
PCDH11X-207ENST00000406881 TSPY4P0CV99 314 aa6.64□□□□□ -1.35
PCDH11X-207ENST00000406881 TSPY10P0CW01 314 aa6.64□□□□□ -1.35
PCDH11X-207ENST00000406881 RAPGEF2Q9Y4G8 1499 aa6.64□□□□□ -1.35
PCDH11X-207ENST00000406881 HMGXB3Q12766 1538 aa6.64□□□□□ -1.35
PCDH11X-207ENST00000406881 PLEKHD1A6NEE1 506 aa6.64□□□□□ -1.35
PCDH11X-207ENST00000406881 FANCD2Q9BXW9 1451 aa6.63□□□□□ -1.35
PCDH11X-207ENST00000406881 CCNB3Q8WWL7 1395 aa6.62□□□□□ -1.35
PCDH11X-207ENST00000406881 FMN1Q68DA7 1419 aa6.62□□□□□ -1.35
PCDH11X-207ENST00000406881 BICRAQ9NZM4 1560 aa6.61□□□□□ -1.35
PCDH11X-207ENST00000406881 ZNF326Q5BKZ1 582 aaKnown RBP6.6□□□□□ -1.35
PCDH11X-207ENST00000406881 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
PCDH11X-207ENST00000406881 CFTRP13569 1480 aa6.6□□□□□ -1.35
PCDH11X-207ENST00000406881 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms