RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.61
PARVB-203ENST00000404989 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
PARVB-203ENST00000404989 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
PARVB-203ENST00000404989 APLP2Q06481 763 aa25.07■■□□□ 1.6
PARVB-203ENST00000404989 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
PARVB-203ENST00000404989 EFCAB5A4FU69 1503 aa25.05■■□□□ 1.6
PARVB-203ENST00000404989 SNAPC4Q5SXM2 1469 aa24.97■■□□□ 1.59
PARVB-203ENST00000404989 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
PARVB-203ENST00000404989 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
PARVB-203ENST00000404989 FHOD3Q2V2M9 1422 aa24.96■■□□□ 1.59
PARVB-203ENST00000404989 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
PARVB-203ENST00000404989 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
PARVB-203ENST00000404989 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
PARVB-203ENST00000404989 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
PARVB-203ENST00000404989 TIAM1Q13009 1591 aa24.88■■□□□ 1.57
PARVB-203ENST00000404989 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
PARVB-203ENST00000404989 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
PARVB-203ENST00000404989 CASKIN1Q8WXD9 1431 aa24.84■■□□□ 1.57
PARVB-203ENST00000404989 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
PARVB-203ENST00000404989 FMN1Q68DA7 1419 aa24.81■■□□□ 1.56
PARVB-203ENST00000404989 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
PARVB-203ENST00000404989 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
PARVB-203ENST00000404989 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
PARVB-203ENST00000404989 UGGT2Q9NYU1 1516 aa24.79■■□□□ 1.56
PARVB-203ENST00000404989 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
PARVB-203ENST00000404989 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
PARVB-203ENST00000404989 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
PARVB-203ENST00000404989 CEP170Q5SW79 1584 aa24.73■■□□□ 1.55
PARVB-203ENST00000404989 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
PARVB-203ENST00000404989 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
PARVB-203ENST00000404989 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
PARVB-203ENST00000404989 NUP160Q12769 1436 aa24.68■■□□□ 1.54
PARVB-203ENST00000404989 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
PARVB-203ENST00000404989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
PARVB-203ENST00000404989 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
PARVB-203ENST00000404989 KIAA0556O60303 1618 aa24.64■■□□□ 1.53
PARVB-203ENST00000404989 FBLN2P98095 1184 aa24.63■■□□□ 1.53
PARVB-203ENST00000404989 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.52
PARVB-203ENST00000404989 PHLDB1Q86UU1 1377 aa24.57■■□□□ 1.52
PARVB-203ENST00000404989 CCER1Q8TC90 406 aaPredicted RBP24.54■■□□□ 1.52
PARVB-203ENST00000404989 HECW1Q76N89 1606 aa24.54■■□□□ 1.52
PARVB-203ENST00000404989 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
PARVB-203ENST00000404989 CHD1O14646 1710 aa24.51■■□□□ 1.51
PARVB-203ENST00000404989 JPH4Q96JJ6 628 aa24.5■■□□□ 1.51
PARVB-203ENST00000404989 EPRSP07814 1512 aaKnown RBP24.47■■□□□ 1.51
PARVB-203ENST00000404989 MAGI3Q5TCQ9 1506 aa24.47■■□□□ 1.51
PARVB-203ENST00000404989 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
PARVB-203ENST00000404989 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.5
PARVB-203ENST00000404989 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
PARVB-203ENST00000404989 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
PARVB-203ENST00000404989 CDK13Q14004 1512 aaKnown RBP24.41■■□□□ 1.5
PARVB-203ENST00000404989 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
PARVB-203ENST00000404989 NUP153P49790 1475 aaKnown RBP24.39■■□□□ 1.5
PARVB-203ENST00000404989 NCOA2Q15596 1464 aa24.39■■□□□ 1.5
PARVB-203ENST00000404989 ARHGEF11O15085 1522 aa24.39■■□□□ 1.5
PARVB-203ENST00000404989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.37■■□□□ 1.49
PARVB-203ENST00000404989 FGD6Q6ZV73 1430 aa24.34■■□□□ 1.49
PARVB-203ENST00000404989 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
PARVB-203ENST00000404989 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
PARVB-203ENST00000404989 ITGAEP38570 1179 aa24.31■■□□□ 1.48
PARVB-203ENST00000404989 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
PARVB-203ENST00000404989 MYOM3Q5VTT5 1437 aa24.31■■□□□ 1.48
PARVB-203ENST00000404989 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
PARVB-203ENST00000404989 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
PARVB-203ENST00000404989 ABCA8O94911 1581 aa24.29■■□□□ 1.48
PARVB-203ENST00000404989 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
PARVB-203ENST00000404989 DHX57Q6P158 1386 aaKnown RBP24.22■■□□□ 1.47
PARVB-203ENST00000404989 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
PARVB-203ENST00000404989 PTPRGP23470 1445 aa24.18■■□□□ 1.46
PARVB-203ENST00000404989 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
PARVB-203ENST00000404989 TCOF1Q13428 1488 aaKnown RBP24.18■■□□□ 1.46
PARVB-203ENST00000404989 RAB3GAP2Q9H2M9 1393 aa24.17■■□□□ 1.46
PARVB-203ENST00000404989 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
PARVB-203ENST00000404989 TROQ12816 1431 aaPredicted RBP24.16■■□□□ 1.46
PARVB-203ENST00000404989 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
PARVB-203ENST00000404989 PTPRKQ15262 1439 aa24.15■■□□□ 1.46
PARVB-203ENST00000404989 ATP10BO94823 1461 aa24.14■■□□□ 1.46
PARVB-203ENST00000404989 MIA2Q96PC5 1412 aa24.14■■□□□ 1.46
PARVB-203ENST00000404989 ADCY10Q96PN6 1610 aa24.12■■□□□ 1.45
PARVB-203ENST00000404989 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
PARVB-203ENST00000404989 KIF14Q15058 1648 aa24.07■■□□□ 1.44
PARVB-203ENST00000404989 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
PARVB-203ENST00000404989 HFM1A2PYH4 1435 aa24.01■■□□□ 1.43
PARVB-203ENST00000404989 PLEKHD1A6NEE1 506 aa24.01■■□□□ 1.43
PARVB-203ENST00000404989 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
PARVB-203ENST00000404989 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
PARVB-203ENST00000404989 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
PARVB-203ENST00000404989 NAIPQ13075 1403 aa23.97■■□□□ 1.43
PARVB-203ENST00000404989 ABCC2Q92887 1545 aa23.97■■□□□ 1.43
PARVB-203ENST00000404989 MAPKBP1O60336 1514 aa23.97■■□□□ 1.43
PARVB-203ENST00000404989 ZNF644Q9H582 1327 aaPredicted RBP23.95■■□□□ 1.42
PARVB-203ENST00000404989 CDC42BPAQ5VT25 1732 aa23.93■■□□□ 1.42
PARVB-203ENST00000404989 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
PARVB-203ENST00000404989 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
PARVB-203ENST00000404989 ABCC5O15440 1437 aa23.91■■□□□ 1.42
PARVB-203ENST00000404989 DAPK1P53355 1430 aa23.91■■□□□ 1.42
PARVB-203ENST00000404989 GCC2Q8IWJ2 1684 aa23.91■■□□□ 1.42
PARVB-203ENST00000404989 UHRF1BP1LA0JNW5 1464 aa23.9■■□□□ 1.42
PARVB-203ENST00000404989 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
PARVB-203ENST00000404989 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms