RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
PARVB-203ENST00000404989 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
PARVB-203ENST00000404989 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
PARVB-203ENST00000404989 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
PARVB-203ENST00000404989 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
PARVB-203ENST00000404989 SHROOM4Q9ULL8 1493 aa29.84■■■□□ 2.37
PARVB-203ENST00000404989 ABCC9O60706 1549 aa29.66■■■□□ 2.34
PARVB-203ENST00000404989 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
PARVB-203ENST00000404989 NACADO15069 1562 aa29.33■■■□□ 2.29
PARVB-203ENST00000404989 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
PARVB-203ENST00000404989 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
PARVB-203ENST00000404989 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
PARVB-203ENST00000404989 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
PARVB-203ENST00000404989 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
PARVB-203ENST00000404989 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
PARVB-203ENST00000404989 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
PARVB-203ENST00000404989 MROH2BQ7Z745 1585 aa28.13■■■□□ 2.09
PARVB-203ENST00000404989 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
PARVB-203ENST00000404989 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
PARVB-203ENST00000404989 WIZO95785 1651 aa27.92■■■□□ 2.06
PARVB-203ENST00000404989 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
PARVB-203ENST00000404989 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
PARVB-203ENST00000404989 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
PARVB-203ENST00000404989 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
PARVB-203ENST00000404989 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
PARVB-203ENST00000404989 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
PARVB-203ENST00000404989 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
PARVB-203ENST00000404989 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
PARVB-203ENST00000404989 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.94
PARVB-203ENST00000404989 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
PARVB-203ENST00000404989 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
PARVB-203ENST00000404989 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
PARVB-203ENST00000404989 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
PARVB-203ENST00000404989 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
PARVB-203ENST00000404989 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
PARVB-203ENST00000404989 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
PARVB-203ENST00000404989 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
PARVB-203ENST00000404989 CFTRP13569 1480 aa26.56■■□□□ 1.84
PARVB-203ENST00000404989 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
PARVB-203ENST00000404989 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
PARVB-203ENST00000404989 SOGA1O94964 1423 aa26.41■■□□□ 1.82
PARVB-203ENST00000404989 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
PARVB-203ENST00000404989 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
PARVB-203ENST00000404989 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
PARVB-203ENST00000404989 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
PARVB-203ENST00000404989 EEA1Q15075 1411 aa26.31■■□□□ 1.8
PARVB-203ENST00000404989 CUX1P39880 1505 aa26.28■■□□□ 1.8
PARVB-203ENST00000404989 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
PARVB-203ENST00000404989 CSRNP3Q8WYN3 585 aa26.2■■□□□ 1.79
PARVB-203ENST00000404989 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.79
PARVB-203ENST00000404989 NESP48681 1621 aa26.15■■□□□ 1.78
PARVB-203ENST00000404989 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
PARVB-203ENST00000404989 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
PARVB-203ENST00000404989 KIF21BO75037 1637 aa26.01■■□□□ 1.75
PARVB-203ENST00000404989 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
PARVB-203ENST00000404989 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
PARVB-203ENST00000404989 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.75
PARVB-203ENST00000404989 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
PARVB-203ENST00000404989 DNMBPQ6XZF7 1577 aa25.92■■□□□ 1.74
PARVB-203ENST00000404989 KIF27Q86VH2 1401 aa25.89■■□□□ 1.73
PARVB-203ENST00000404989 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
PARVB-203ENST00000404989 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
PARVB-203ENST00000404989 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
PARVB-203ENST00000404989 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
PARVB-203ENST00000404989 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
PARVB-203ENST00000404989 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
PARVB-203ENST00000404989 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.72
PARVB-203ENST00000404989 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
PARVB-203ENST00000404989 CUX2O14529 1486 aa25.79■■□□□ 1.72
PARVB-203ENST00000404989 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
PARVB-203ENST00000404989 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
PARVB-203ENST00000404989 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
PARVB-203ENST00000404989 IGF1RP08069 1367 aa25.7■■□□□ 1.71
PARVB-203ENST00000404989 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
PARVB-203ENST00000404989 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
PARVB-203ENST00000404989 TRIM26Q12899 539 aaPredicted RBP25.63■■□□□ 1.69
PARVB-203ENST00000404989 WDR97A6NE52 1622 aa25.62■■□□□ 1.69
PARVB-203ENST00000404989 CLIP1P30622 1438 aa25.58■■□□□ 1.69
PARVB-203ENST00000404989 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
PARVB-203ENST00000404989 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
PARVB-203ENST00000404989 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
PARVB-203ENST00000404989 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
PARVB-203ENST00000404989 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
PARVB-203ENST00000404989 WDR62O43379 1518 aa25.43■■□□□ 1.66
PARVB-203ENST00000404989 TDRD9Q8NDG6 1382 aaKnown RBP25.42■■□□□ 1.66
PARVB-203ENST00000404989 CUL7Q14999 1698 aa25.42■■□□□ 1.66
PARVB-203ENST00000404989 VPS8Q8N3P4 1428 aa25.4■■□□□ 1.66
PARVB-203ENST00000404989 GAPVD1Q14C86 1478 aa25.39■■□□□ 1.66
PARVB-203ENST00000404989 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.65
PARVB-203ENST00000404989 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
PARVB-203ENST00000404989 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
PARVB-203ENST00000404989 THOC2Q8NI27 1593 aaKnown RBP25.32■■□□□ 1.64
PARVB-203ENST00000404989 ARHGAP35Q9NRY4 1499 aa25.3■■□□□ 1.64
PARVB-203ENST00000404989 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
PARVB-203ENST00000404989 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
PARVB-203ENST00000404989 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.634e-8■■■■■ 34.1
PARVB-203ENST00000404989 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.63
PARVB-203ENST00000404989 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
PARVB-203ENST00000404989 HRCP23327 699 aa25.18■■□□□ 1.62
PARVB-203ENST00000404989 GRIN2BQ13224 1484 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms