RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
TOP3B-202ENST00000398793 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
TOP3B-202ENST00000398793 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
TOP3B-202ENST00000398793 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
TOP3B-202ENST00000398793 KIF21BO75037 1637 aa19.78■□□□□ 0.76
TOP3B-202ENST00000398793 ARHGAP35Q9NRY4 1499 aa19.76■□□□□ 0.75
TOP3B-202ENST00000398793 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
TOP3B-202ENST00000398793 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
TOP3B-202ENST00000398793 ACIN1Q9UKV3 1341 aaKnown RBP19.72■□□□□ 0.75
TOP3B-202ENST00000398793 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
TOP3B-202ENST00000398793 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
TOP3B-202ENST00000398793 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
TOP3B-202ENST00000398793 ZNF777Q9ULD5 760 aaPredicted RBP19.68■□□□□ 0.74
TOP3B-202ENST00000398793 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
TOP3B-202ENST00000398793 WDR62O43379 1518 aa19.66■□□□□ 0.74
TOP3B-202ENST00000398793 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
TOP3B-202ENST00000398793 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
TOP3B-202ENST00000398793 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
TOP3B-202ENST00000398793 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
TOP3B-202ENST00000398793 KCNH8Q96L42 1107 aa19.64■□□□□ 0.73
TOP3B-202ENST00000398793 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
TOP3B-202ENST00000398793 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
TOP3B-202ENST00000398793 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
TOP3B-202ENST00000398793 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
TOP3B-202ENST00000398793 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
TOP3B-202ENST00000398793 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
TOP3B-202ENST00000398793 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
TOP3B-202ENST00000398793 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
TOP3B-202ENST00000398793 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
TOP3B-202ENST00000398793 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
TOP3B-202ENST00000398793 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
TOP3B-202ENST00000398793 ADAMTS12P58397 1594 aa19.43■□□□□ 0.7
TOP3B-202ENST00000398793 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
TOP3B-202ENST00000398793 CENPBP07199 599 aaPredicted RBP19.42■□□□□ 0.7
TOP3B-202ENST00000398793 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
TOP3B-202ENST00000398793 PLB1Q6P1J6 1458 aa19.42■□□□□ 0.7
TOP3B-202ENST00000398793 CUL7Q14999 1698 aa19.42■□□□□ 0.7
TOP3B-202ENST00000398793 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
TOP3B-202ENST00000398793 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
TOP3B-202ENST00000398793 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
TOP3B-202ENST00000398793 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
TOP3B-202ENST00000398793 MYT1LQ9UL68 1186 aa19.38■□□□□ 0.69
TOP3B-202ENST00000398793 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
TOP3B-202ENST00000398793 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
TOP3B-202ENST00000398793 FMN1Q68DA7 1419 aa19.35■□□□□ 0.69
TOP3B-202ENST00000398793 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
TOP3B-202ENST00000398793 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
TOP3B-202ENST00000398793 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
TOP3B-202ENST00000398793 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
TOP3B-202ENST00000398793 PTPRGP23470 1445 aa19.33■□□□□ 0.68
TOP3B-202ENST00000398793 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
TOP3B-202ENST00000398793 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
TOP3B-202ENST00000398793 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
TOP3B-202ENST00000398793 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
TOP3B-202ENST00000398793 LRRC9Q6ZRR7 1453 aa19.27■□□□□ 0.68
TOP3B-202ENST00000398793 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.68
TOP3B-202ENST00000398793 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
TOP3B-202ENST00000398793 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.67
TOP3B-202ENST00000398793 DISP1Q96F81 1524 aa19.26■□□□□ 0.67
TOP3B-202ENST00000398793 FOXD1Q16676 465 aa19.26■□□□□ 0.67
TOP3B-202ENST00000398793 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
TOP3B-202ENST00000398793 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.672e-6■■■■■ 28.8
TOP3B-202ENST00000398793 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
TOP3B-202ENST00000398793 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
TOP3B-202ENST00000398793 CHD1O14646 1710 aa19.19■□□□□ 0.66
TOP3B-202ENST00000398793 NUP160Q12769 1436 aa19.17■□□□□ 0.66
TOP3B-202ENST00000398793 EPRSP07814 1512 aaKnown RBP19.16■□□□□ 0.66
TOP3B-202ENST00000398793 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
TOP3B-202ENST00000398793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.664e-7■■■□□ 14.6
TOP3B-202ENST00000398793 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
TOP3B-202ENST00000398793 EFCAB5A4FU69 1503 aa19.14■□□□□ 0.66
TOP3B-202ENST00000398793 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
TOP3B-202ENST00000398793 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
TOP3B-202ENST00000398793 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
TOP3B-202ENST00000398793 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
TOP3B-202ENST00000398793 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
TOP3B-202ENST00000398793 KIAA0556O60303 1618 aa19.11■□□□□ 0.65
TOP3B-202ENST00000398793 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
TOP3B-202ENST00000398793 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.65
TOP3B-202ENST00000398793 PRKCSHP14314 528 aaPredicted RBP19.07■□□□□ 0.64
TOP3B-202ENST00000398793 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
TOP3B-202ENST00000398793 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
TOP3B-202ENST00000398793 FGD6Q6ZV73 1430 aa19.04■□□□□ 0.64
TOP3B-202ENST00000398793 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
TOP3B-202ENST00000398793 ATP10BO94823 1461 aa19.03■□□□□ 0.64
TOP3B-202ENST00000398793 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
TOP3B-202ENST00000398793 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
TOP3B-202ENST00000398793 CNGB1Q14028 1251 aaPredicted RBP19.01■□□□□ 0.63
TOP3B-202ENST00000398793 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
TOP3B-202ENST00000398793 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
TOP3B-202ENST00000398793 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
TOP3B-202ENST00000398793 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
TOP3B-202ENST00000398793 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
TOP3B-202ENST00000398793 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
TOP3B-202ENST00000398793 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
TOP3B-202ENST00000398793 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
TOP3B-202ENST00000398793 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
TOP3B-202ENST00000398793 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
TOP3B-202ENST00000398793 HECW1Q76N89 1606 aa18.95■□□□□ 0.62
TOP3B-202ENST00000398793 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms