RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 FHAD1B1AJZ9 1412 aa39.18■■■■□ 3.86
SHARPIN-202ENST00000398712 MAP3K1Q13233 1512 aa39.15■■■■□ 3.86
SHARPIN-202ENST00000398712 THOC2Q8NI27 1593 aaKnown RBP39.14■■■■□ 3.86
SHARPIN-202ENST00000398712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.11■■■■□ 3.85
SHARPIN-202ENST00000398712 KANK4Q5T7N3 995 aaPredicted RBP39.09■■■■□ 3.85
SHARPIN-202ENST00000398712 CCER1Q8TC90 406 aaPredicted RBP39.09■■■■□ 3.85
SHARPIN-202ENST00000398712 AQRO60306 1485 aaKnown RBP eCLIP39.07■■■■□ 3.847e-9■■■■■ 34.6
SHARPIN-202ENST00000398712 TIAM1Q13009 1591 aa39.06■■■■□ 3.84
SHARPIN-202ENST00000398712 GRIN2BQ13224 1484 aa39.06■■■■□ 3.84
SHARPIN-202ENST00000398712 ADAMTS12P58397 1594 aa39.04■■■■□ 3.84
SHARPIN-202ENST00000398712 PCF11O94913 1555 aaKnown RBP39■■■■□ 3.83
SHARPIN-202ENST00000398712 FHOD3Q2V2M9 1422 aa39■■■■□ 3.83
SHARPIN-202ENST00000398712 SAMD9Q5K651 1589 aa38.97■■■■□ 3.83
SHARPIN-202ENST00000398712 P3H3Q8IVL6 736 aa38.96■■■■□ 3.83
SHARPIN-202ENST00000398712 CFAP43Q8NDM7 1665 aa38.95■■■■□ 3.83
SHARPIN-202ENST00000398712 FYCO1Q9BQS8 1478 aa38.94■■■■□ 3.82
SHARPIN-202ENST00000398712 ZNF608Q9ULD9 1512 aaPredicted RBP38.92■■■■□ 3.82
SHARPIN-202ENST00000398712 HNRNPUL2Q1KMD3 747 aaKnown RBP38.92■■■■□ 3.82
SHARPIN-202ENST00000398712 FMN1Q68DA7 1419 aa38.9■■■■□ 3.82
SHARPIN-202ENST00000398712 RRBP1Q9P2E9 1410 aaKnown RBP38.9■■■■□ 3.82
SHARPIN-202ENST00000398712 CASKIN1Q8WXD9 1431 aa38.89■■■■□ 3.82
SHARPIN-202ENST00000398712 LRRC9Q6ZRR7 1453 aa38.85■■■■□ 3.81
SHARPIN-202ENST00000398712 EIF4G3O43432 1585 aaKnown RBP38.84■■■■□ 3.81
SHARPIN-202ENST00000398712 IQGAP2Q13576 1575 aa38.79■■■■□ 3.8
SHARPIN-202ENST00000398712 SNAPC4Q5SXM2 1469 aa38.74■■■■□ 3.79
SHARPIN-202ENST00000398712 CCNB3Q8WWL7 1395 aa38.73■■■■□ 3.79
SHARPIN-202ENST00000398712 ATP1B4Q9UN42 357 aaPredicted RBP38.69■■■■□ 3.78
SHARPIN-202ENST00000398712 MAGI1Q96QZ7 1491 aaPredicted RBP38.65■■■■□ 3.78
SHARPIN-202ENST00000398712 GRIN2AQ12879 1464 aa38.6■■■■□ 3.77
SHARPIN-202ENST00000398712 UGGT2Q9NYU1 1516 aa38.59■■■■□ 3.77
SHARPIN-202ENST00000398712 KIAA0586Q9BVV6 1533 aa38.56■■■■□ 3.76
SHARPIN-202ENST00000398712 PHLDB1Q86UU1 1377 aa38.53■■■■□ 3.76
SHARPIN-202ENST00000398712 LRRIQ1Q96JM4 1722 aa38.51■■■■□ 3.76
SHARPIN-202ENST00000398712 SYNJ2O15056 1496 aa38.49■■■■□ 3.75
SHARPIN-202ENST00000398712 HECW1Q76N89 1606 aa38.44■■■■□ 3.74
SHARPIN-202ENST00000398712 CCDC18Q5T9S5 1454 aa38.43■■■■□ 3.74
SHARPIN-202ENST00000398712 MTUS2Q5JR59 1369 aa38.41■■■■□ 3.74
SHARPIN-202ENST00000398712 KIAA0556O60303 1618 aa38.38■■■■□ 3.73
SHARPIN-202ENST00000398712 CHMP7Q8WUX9 453 aaPredicted RBP38.37■■■■□ 3.73
SHARPIN-202ENST00000398712 EHBP1L1Q8N3D4 1523 aa38.36■■■■□ 3.73
SHARPIN-202ENST00000398712 CEP170Q5SW79 1584 aa38.33■■■■□ 3.73
SHARPIN-202ENST00000398712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.33■■■■□ 3.73
SHARPIN-202ENST00000398712 DISP1Q96F81 1524 aa38.32■■■■□ 3.73
SHARPIN-202ENST00000398712 SUPT6HQ7KZ85 1726 aaKnown RBP38.3■■■■□ 3.72
SHARPIN-202ENST00000398712 CLSPNQ9HAW4 1339 aa38.3■■■■□ 3.72
SHARPIN-202ENST00000398712 ITGAEP38570 1179 aa38.27■■■■□ 3.72
SHARPIN-202ENST00000398712 FAM50AQ14320 339 aaKnown RBP38.25■■■■□ 3.71
SHARPIN-202ENST00000398712 NUP160Q12769 1436 aa38.25■■■■□ 3.71
SHARPIN-202ENST00000398712 DHX57Q6P158 1386 aaKnown RBP38.25■■■■□ 3.71
SHARPIN-202ENST00000398712 EPRSP07814 1512 aaKnown RBP38.24■■■■□ 3.71
SHARPIN-202ENST00000398712 FGD6Q6ZV73 1430 aa38.22■■■■□ 3.71
SHARPIN-202ENST00000398712 NCOA2Q15596 1464 aa38.22■■■■□ 3.71
SHARPIN-202ENST00000398712 FBLN2P98095 1184 aa38.19■■■■□ 3.7
SHARPIN-202ENST00000398712 MAGI3Q5TCQ9 1506 aa38.15■■■■□ 3.7
SHARPIN-202ENST00000398712 MYOM3Q5VTT5 1437 aa38.14■■■■□ 3.7
SHARPIN-202ENST00000398712 ARHGEF11O15085 1522 aa38.14■■■■□ 3.7
SHARPIN-202ENST00000398712 SETD5Q9C0A6 1442 aa38.12■■■■□ 3.69
SHARPIN-202ENST00000398712 RAPGEF6Q8TEU7 1601 aa38.11■■■■□ 3.69
SHARPIN-202ENST00000398712 RAB3GAP2Q9H2M9 1393 aa38.11■■■■□ 3.69
SHARPIN-202ENST00000398712 CDK13Q14004 1512 aaKnown RBP38.09■■■■□ 3.69
SHARPIN-202ENST00000398712 CARMIL2Q6F5E8 1435 aa38.07■■■■□ 3.69
SHARPIN-202ENST00000398712 NUP153P49790 1475 aaKnown RBP38■■■■□ 3.67
SHARPIN-202ENST00000398712 JPH4Q96JJ6 628 aa38■■■■□ 3.67
SHARPIN-202ENST00000398712 PTPN23Q9H3S7 1636 aa37.98■■■■□ 3.67
SHARPIN-202ENST00000398712 TCOF1Q13428 1488 aaKnown RBP37.9■■■■□ 3.66
SHARPIN-202ENST00000398712 CHD1O14646 1710 aa37.88■■■■□ 3.65
SHARPIN-202ENST00000398712 CDK11AQ9UQ88 783 aaPredicted RBP37.86■■■■□ 3.65
SHARPIN-202ENST00000398712 MIA2Q96PC5 1412 aa37.86■■■■□ 3.65
SHARPIN-202ENST00000398712 ARID3CA6NKF2 412 aa37.85■■■■□ 3.65
SHARPIN-202ENST00000398712 PLB1Q6P1J6 1458 aa37.83■■■■□ 3.65
SHARPIN-202ENST00000398712 ZNF316A6NFI3 1004 aaPredicted RBP37.81■■■■□ 3.64
SHARPIN-202ENST00000398712 HFM1A2PYH4 1435 aa37.79■■■■□ 3.64
SHARPIN-202ENST00000398712 MAPKBP1O60336 1514 aa37.79■■■■□ 3.64
SHARPIN-202ENST00000398712 PTPRKQ15262 1439 aa37.78■■■■□ 3.64
SHARPIN-202ENST00000398712 ABCA8O94911 1581 aa37.74■■■■□ 3.63
SHARPIN-202ENST00000398712 TROQ12816 1431 aaPredicted RBP37.72■■■■□ 3.63
SHARPIN-202ENST00000398712 PRG4Q92954 1404 aaPredicted RBP37.7■■■■□ 3.63
SHARPIN-202ENST00000398712 ADCY10Q96PN6 1610 aa37.67■■■■□ 3.62
SHARPIN-202ENST00000398712 DIEXFQ68CQ4 756 aaKnown RBP37.66■■■■□ 3.62
SHARPIN-202ENST00000398712 NAIPQ13075 1403 aa37.65■■■■□ 3.62
SHARPIN-202ENST00000398712 SHROOM2Q13796 1616 aa37.65■■■■□ 3.62
SHARPIN-202ENST00000398712 AKNAQ7Z591 1439 aa37.62■■■■□ 3.61
SHARPIN-202ENST00000398712 GCC2Q8IWJ2 1684 aa37.6■■■■□ 3.61
SHARPIN-202ENST00000398712 ITSN2Q9NZM3 1697 aa37.6■■■■□ 3.61
SHARPIN-202ENST00000398712 PTPRGP23470 1445 aa37.57■■■■□ 3.6
SHARPIN-202ENST00000398712 UACAQ9BZF9 1416 aa37.55■■■■□ 3.6
SHARPIN-202ENST00000398712 ATP10BO94823 1461 aa37.52■■■■□ 3.6
SHARPIN-202ENST00000398712 DNMT1P26358 1616 aaKnown RBP37.51■■■■□ 3.6
SHARPIN-202ENST00000398712 KIF14Q15058 1648 aa37.51■■■■□ 3.6
SHARPIN-202ENST00000398712 DAPK1P53355 1430 aa37.46■■■■□ 3.59
SHARPIN-202ENST00000398712 PLEKHD1A6NEE1 506 aa37.46■■■■□ 3.59
SHARPIN-202ENST00000398712 GPATCH8Q9UKJ3 1502 aaKnown RBP37.44■■■■□ 3.58
SHARPIN-202ENST00000398712 CHIC2Q9UKJ5 165 aa37.43■■■■□ 3.58
SHARPIN-202ENST00000398712 TIMELESSQ9UNS1 1208 aa37.42■■■■□ 3.58
SHARPIN-202ENST00000398712 ROCK1Q13464 1354 aa37.41■■■■□ 3.58
SHARPIN-202ENST00000398712 RRP7BPQ9NSQ0 103 aa37.41■■■■□ 3.58
SHARPIN-202ENST00000398712 CLASP1Q7Z460 1538 aa37.4■■■■□ 3.58
SHARPIN-202ENST00000398712 ABCC5O15440 1437 aa37.39■■■■□ 3.58
SHARPIN-202ENST00000398712 CAMSAP2Q08AD1 1489 aa37.39■■■■□ 3.58
SHARPIN-202ENST00000398712 CFDP1Q9UEE9 299 aaPredicted RBP37.38■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms