RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 EFCAB5A4FU69 1503 aa23.26■■□□□ 1.31
MBD1-209ENST00000398495 PCF11O94913 1555 aaKnown RBP23.23■■□□□ 1.31
MBD1-209ENST00000398495 TIAM1Q13009 1591 aa23.22■■□□□ 1.31
MBD1-209ENST00000398495 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
MBD1-209ENST00000398495 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.316e-7■■■□□ 18.9
MBD1-209ENST00000398495 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
MBD1-209ENST00000398495 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
MBD1-209ENST00000398495 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
MBD1-209ENST00000398495 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
MBD1-209ENST00000398495 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
MBD1-209ENST00000398495 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
MBD1-209ENST00000398495 CFAP43Q8NDM7 1665 aa23.17■■□□□ 1.3
MBD1-209ENST00000398495 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
MBD1-209ENST00000398495 THOC2Q8NI27 1593 aaKnown RBP23.16■■□□□ 1.3
MBD1-209ENST00000398495 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
MBD1-209ENST00000398495 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
MBD1-209ENST00000398495 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
MBD1-209ENST00000398495 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
MBD1-209ENST00000398495 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
MBD1-209ENST00000398495 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
MBD1-209ENST00000398495 CASKIN1Q8WXD9 1431 aa23.07■■□□□ 1.28
MBD1-209ENST00000398495 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
MBD1-209ENST00000398495 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
MBD1-209ENST00000398495 FMN1Q68DA7 1419 aa23.03■■□□□ 1.28
MBD1-209ENST00000398495 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
MBD1-209ENST00000398495 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
MBD1-209ENST00000398495 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
MBD1-209ENST00000398495 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
MBD1-209ENST00000398495 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
MBD1-209ENST00000398495 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
MBD1-209ENST00000398495 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
MBD1-209ENST00000398495 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
MBD1-209ENST00000398495 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
MBD1-209ENST00000398495 ITGAEP38570 1179 aa22.81■■□□□ 1.24
MBD1-209ENST00000398495 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
MBD1-209ENST00000398495 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MBD1-209ENST00000398495 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
MBD1-209ENST00000398495 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
MBD1-209ENST00000398495 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
MBD1-209ENST00000398495 MTUS2Q5JR59 1369 aa22.78■■□□□ 1.24
MBD1-209ENST00000398495 DISP1Q96F81 1524 aa22.77■■□□□ 1.23
MBD1-209ENST00000398495 EHBP1L1Q8N3D4 1523 aa22.76■■□□□ 1.23
MBD1-209ENST00000398495 CCDC18Q5T9S5 1454 aa22.76■■□□□ 1.23
MBD1-209ENST00000398495 MAGI3Q5TCQ9 1506 aa22.75■■□□□ 1.23
MBD1-209ENST00000398495 FAM50AQ14320 339 aaKnown RBP22.74■■□□□ 1.23
MBD1-209ENST00000398495 SUPT6HQ7KZ85 1726 aaKnown RBP22.73■■□□□ 1.23
MBD1-209ENST00000398495 FGD6Q6ZV73 1430 aa22.72■■□□□ 1.23
MBD1-209ENST00000398495 NCOA2Q15596 1464 aa22.71■■□□□ 1.23
MBD1-209ENST00000398495 EPRSP07814 1512 aaKnown RBP22.7■■□□□ 1.22
MBD1-209ENST00000398495 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
MBD1-209ENST00000398495 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
MBD1-209ENST00000398495 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
MBD1-209ENST00000398495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
MBD1-209ENST00000398495 NUP160Q12769 1436 aa22.66■■□□□ 1.22
MBD1-209ENST00000398495 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
MBD1-209ENST00000398495 CLSPNQ9HAW4 1339 aa22.65■■□□□ 1.22
MBD1-209ENST00000398495 FBLN2P98095 1184 aa22.65■■□□□ 1.22
MBD1-209ENST00000398495 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.22
MBD1-209ENST00000398495 MYOM3Q5VTT5 1437 aa22.64■■□□□ 1.21
MBD1-209ENST00000398495 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
MBD1-209ENST00000398495 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.21
MBD1-209ENST00000398495 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
MBD1-209ENST00000398495 PTPN23Q9H3S7 1636 aa22.57■■□□□ 1.2
MBD1-209ENST00000398495 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
MBD1-209ENST00000398495 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
MBD1-209ENST00000398495 CHD1O14646 1710 aa22.5■■□□□ 1.19
MBD1-209ENST00000398495 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
MBD1-209ENST00000398495 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
MBD1-209ENST00000398495 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
MBD1-209ENST00000398495 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
MBD1-209ENST00000398495 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
MBD1-209ENST00000398495 DIEXFQ68CQ4 756 aaKnown RBP22.44■■□□□ 1.18
MBD1-209ENST00000398495 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
MBD1-209ENST00000398495 MIA2Q96PC5 1412 aa22.42■■□□□ 1.18
MBD1-209ENST00000398495 ABCA8O94911 1581 aa22.4■■□□□ 1.18
MBD1-209ENST00000398495 NAIPQ13075 1403 aa22.39■■□□□ 1.17
MBD1-209ENST00000398495 PRG4Q92954 1404 aaPredicted RBP22.37■■□□□ 1.17
MBD1-209ENST00000398495 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
MBD1-209ENST00000398495 GCC2Q8IWJ2 1684 aa22.36■■□□□ 1.17
MBD1-209ENST00000398495 ADCY10Q96PN6 1610 aa22.36■■□□□ 1.17
MBD1-209ENST00000398495 KIF14Q15058 1648 aa22.34■■□□□ 1.17
MBD1-209ENST00000398495 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
MBD1-209ENST00000398495 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
MBD1-209ENST00000398495 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
MBD1-209ENST00000398495 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
MBD1-209ENST00000398495 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
MBD1-209ENST00000398495 DNMT1P26358 1616 aaKnown RBP22.28■■□□□ 1.16
MBD1-209ENST00000398495 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
MBD1-209ENST00000398495 KDM6BO15054 1643 aa22.27■■□□□ 1.16
MBD1-209ENST00000398495 ATP10BO94823 1461 aa22.27■■□□□ 1.15
MBD1-209ENST00000398495 SIN3AQ96ST3 1273 aa22.26■■□□□ 1.15
MBD1-209ENST00000398495 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
MBD1-209ENST00000398495 DAPK1P53355 1430 aa22.25■■□□□ 1.15
MBD1-209ENST00000398495 PTPRGP23470 1445 aa22.24■■□□□ 1.15
MBD1-209ENST00000398495 ZNF644Q9H582 1327 aaPredicted RBP22.24■■□□□ 1.15
MBD1-209ENST00000398495 GPATCH8Q9UKJ3 1502 aaKnown RBP22.23■■□□□ 1.15
MBD1-209ENST00000398495 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
MBD1-209ENST00000398495 ABCC5O15440 1437 aa22.22■■□□□ 1.15
MBD1-209ENST00000398495 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
MBD1-209ENST00000398495 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms