RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
MBD1-209ENST00000398495 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
MBD1-209ENST00000398495 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
MBD1-209ENST00000398495 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
MBD1-209ENST00000398495 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
MBD1-209ENST00000398495 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
MBD1-209ENST00000398495 ABCC9O60706 1549 aa27.15■■□□□ 1.94
MBD1-209ENST00000398495 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
MBD1-209ENST00000398495 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
MBD1-209ENST00000398495 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
MBD1-209ENST00000398495 NACADO15069 1562 aa26.89■■□□□ 1.9
MBD1-209ENST00000398495 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
MBD1-209ENST00000398495 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
MBD1-209ENST00000398495 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.78
MBD1-209ENST00000398495 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
MBD1-209ENST00000398495 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
MBD1-209ENST00000398495 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
MBD1-209ENST00000398495 WIZO95785 1651 aa25.88■■□□□ 1.73
MBD1-209ENST00000398495 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
MBD1-209ENST00000398495 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
MBD1-209ENST00000398495 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
MBD1-209ENST00000398495 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
MBD1-209ENST00000398495 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
MBD1-209ENST00000398495 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
MBD1-209ENST00000398495 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
MBD1-209ENST00000398495 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
MBD1-209ENST00000398495 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
MBD1-209ENST00000398495 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
MBD1-209ENST00000398495 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
MBD1-209ENST00000398495 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
MBD1-209ENST00000398495 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
MBD1-209ENST00000398495 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
MBD1-209ENST00000398495 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.58
MBD1-209ENST00000398495 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
MBD1-209ENST00000398495 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
MBD1-209ENST00000398495 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
MBD1-209ENST00000398495 EHMT2Q96KQ7 1210 aa24.67■■□□□ 1.54
MBD1-209ENST00000398495 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
MBD1-209ENST00000398495 SOGA1O94964 1423 aa24.6■■□□□ 1.53
MBD1-209ENST00000398495 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
MBD1-209ENST00000398495 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
MBD1-209ENST00000398495 EEA1Q15075 1411 aa24.49■■□□□ 1.51
MBD1-209ENST00000398495 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
MBD1-209ENST00000398495 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
MBD1-209ENST00000398495 CFTRP13569 1480 aa24.43■■□□□ 1.5
MBD1-209ENST00000398495 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
MBD1-209ENST00000398495 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
MBD1-209ENST00000398495 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
MBD1-209ENST00000398495 CUX1P39880 1505 aa24.3■■□□□ 1.48
MBD1-209ENST00000398495 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
MBD1-209ENST00000398495 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
MBD1-209ENST00000398495 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
MBD1-209ENST00000398495 KIF21BO75037 1637 aa24.25■■□□□ 1.47
MBD1-209ENST00000398495 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
MBD1-209ENST00000398495 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
MBD1-209ENST00000398495 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.46
MBD1-209ENST00000398495 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
MBD1-209ENST00000398495 HRCP23327 699 aa24.13■■□□□ 1.45
MBD1-209ENST00000398495 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
MBD1-209ENST00000398495 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
MBD1-209ENST00000398495 NESP48681 1621 aa24.01■■□□□ 1.43
MBD1-209ENST00000398495 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
MBD1-209ENST00000398495 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
MBD1-209ENST00000398495 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
MBD1-209ENST00000398495 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
MBD1-209ENST00000398495 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
MBD1-209ENST00000398495 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
MBD1-209ENST00000398495 CLIP1P30622 1438 aa23.91■■□□□ 1.42
MBD1-209ENST00000398495 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.42
MBD1-209ENST00000398495 CUX2O14529 1486 aa23.88■■□□□ 1.41
MBD1-209ENST00000398495 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
MBD1-209ENST00000398495 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
MBD1-209ENST00000398495 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
MBD1-209ENST00000398495 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
MBD1-209ENST00000398495 IGF1RP08069 1367 aa23.74■■□□□ 1.39
MBD1-209ENST00000398495 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
MBD1-209ENST00000398495 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
MBD1-209ENST00000398495 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
MBD1-209ENST00000398495 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
MBD1-209ENST00000398495 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
MBD1-209ENST00000398495 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
MBD1-209ENST00000398495 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
MBD1-209ENST00000398495 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
MBD1-209ENST00000398495 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
MBD1-209ENST00000398495 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
MBD1-209ENST00000398495 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
MBD1-209ENST00000398495 CUL7Q14999 1698 aa23.52■■□□□ 1.36
MBD1-209ENST00000398495 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
MBD1-209ENST00000398495 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
MBD1-209ENST00000398495 APLP2Q06481 763 aa23.46■■□□□ 1.35
MBD1-209ENST00000398495 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
MBD1-209ENST00000398495 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
MBD1-209ENST00000398495 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
MBD1-209ENST00000398495 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
MBD1-209ENST00000398495 CTTNBP2Q8WZ74 1663 aa23.39■■□□□ 1.33
MBD1-209ENST00000398495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
MBD1-209ENST00000398495 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
MBD1-209ENST00000398495 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
MBD1-209ENST00000398495 WDR62O43379 1518 aa23.28■■□□□ 1.32
MBD1-209ENST00000398495 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms