RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
GTF2A2-202ENST00000396060 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
GTF2A2-202ENST00000396060 EFCAB5A4FU69 1503 aa18.61■□□□□ 0.57
GTF2A2-202ENST00000396060 SYNJ2O15056 1496 aa18.58■□□□□ 0.56
GTF2A2-202ENST00000396060 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
GTF2A2-202ENST00000396060 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
GTF2A2-202ENST00000396060 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
GTF2A2-202ENST00000396060 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
GTF2A2-202ENST00000396060 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
GTF2A2-202ENST00000396060 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
GTF2A2-202ENST00000396060 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
GTF2A2-202ENST00000396060 NUP160Q12769 1436 aa18.48■□□□□ 0.55
GTF2A2-202ENST00000396060 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
GTF2A2-202ENST00000396060 APLP2Q06481 763 aa18.47■□□□□ 0.55
GTF2A2-202ENST00000396060 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
GTF2A2-202ENST00000396060 FMN1Q68DA7 1419 aa18.43■□□□□ 0.54
GTF2A2-202ENST00000396060 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
GTF2A2-202ENST00000396060 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
GTF2A2-202ENST00000396060 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
GTF2A2-202ENST00000396060 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
GTF2A2-202ENST00000396060 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
GTF2A2-202ENST00000396060 FYCO1Q9BQS8 1478 aa18.38■□□□□ 0.53
GTF2A2-202ENST00000396060 FBLN2P98095 1184 aa18.36■□□□□ 0.53
GTF2A2-202ENST00000396060 DISP1Q96F81 1524 aa18.35■□□□□ 0.53
GTF2A2-202ENST00000396060 PCF11O94913 1555 aaKnown RBP18.33■□□□□ 0.52
GTF2A2-202ENST00000396060 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
GTF2A2-202ENST00000396060 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
GTF2A2-202ENST00000396060 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
GTF2A2-202ENST00000396060 KANK4Q5T7N3 995 aaPredicted RBP18.3■□□□□ 0.52
GTF2A2-202ENST00000396060 CHD1O14646 1710 aa18.28■□□□□ 0.52
GTF2A2-202ENST00000396060 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.52
GTF2A2-202ENST00000396060 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.51
GTF2A2-202ENST00000396060 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
GTF2A2-202ENST00000396060 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
GTF2A2-202ENST00000396060 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
GTF2A2-202ENST00000396060 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
GTF2A2-202ENST00000396060 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
GTF2A2-202ENST00000396060 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
GTF2A2-202ENST00000396060 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
GTF2A2-202ENST00000396060 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
GTF2A2-202ENST00000396060 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
GTF2A2-202ENST00000396060 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
GTF2A2-202ENST00000396060 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
GTF2A2-202ENST00000396060 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
GTF2A2-202ENST00000396060 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
GTF2A2-202ENST00000396060 EHBP1L1Q8N3D4 1523 aa18.09■□□□□ 0.49
GTF2A2-202ENST00000396060 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
GTF2A2-202ENST00000396060 ABCA8O94911 1581 aa18.08■□□□□ 0.48
GTF2A2-202ENST00000396060 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.48
GTF2A2-202ENST00000396060 PTPRGP23470 1445 aa18.07■□□□□ 0.48
GTF2A2-202ENST00000396060 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
GTF2A2-202ENST00000396060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■□□□ 13.2
GTF2A2-202ENST00000396060 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
GTF2A2-202ENST00000396060 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
GTF2A2-202ENST00000396060 HRCP23327 699 aa18.04■□□□□ 0.48
GTF2A2-202ENST00000396060 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
GTF2A2-202ENST00000396060 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
GTF2A2-202ENST00000396060 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.48
GTF2A2-202ENST00000396060 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
GTF2A2-202ENST00000396060 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.47
GTF2A2-202ENST00000396060 OSCARQ8IYS5 282 aa18■□□□□ 0.47
GTF2A2-202ENST00000396060 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
GTF2A2-202ENST00000396060 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
GTF2A2-202ENST00000396060 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
GTF2A2-202ENST00000396060 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
GTF2A2-202ENST00000396060 ATP10BO94823 1461 aa17.96■□□□□ 0.47
GTF2A2-202ENST00000396060 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.46
GTF2A2-202ENST00000396060 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
GTF2A2-202ENST00000396060 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
GTF2A2-202ENST00000396060 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
GTF2A2-202ENST00000396060 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
GTF2A2-202ENST00000396060 ABCC2Q92887 1545 aa17.91■□□□□ 0.46
GTF2A2-202ENST00000396060 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
GTF2A2-202ENST00000396060 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
GTF2A2-202ENST00000396060 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
GTF2A2-202ENST00000396060 ARID3CA6NKF2 412 aa17.88■□□□□ 0.45
GTF2A2-202ENST00000396060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
GTF2A2-202ENST00000396060 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
GTF2A2-202ENST00000396060 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.45
GTF2A2-202ENST00000396060 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.44
GTF2A2-202ENST00000396060 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
GTF2A2-202ENST00000396060 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
GTF2A2-202ENST00000396060 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
GTF2A2-202ENST00000396060 KIF14Q15058 1648 aa17.78■□□□□ 0.44
GTF2A2-202ENST00000396060 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.43
GTF2A2-202ENST00000396060 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
GTF2A2-202ENST00000396060 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
GTF2A2-202ENST00000396060 ITGAEP38570 1179 aa17.74■□□□□ 0.43
GTF2A2-202ENST00000396060 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
GTF2A2-202ENST00000396060 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
GTF2A2-202ENST00000396060 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
GTF2A2-202ENST00000396060 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
GTF2A2-202ENST00000396060 HFM1A2PYH4 1435 aa17.71■□□□□ 0.43
GTF2A2-202ENST00000396060 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.43
GTF2A2-202ENST00000396060 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
GTF2A2-202ENST00000396060 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
GTF2A2-202ENST00000396060 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
GTF2A2-202ENST00000396060 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
GTF2A2-202ENST00000396060 ABCC5O15440 1437 aa17.67■□□□□ 0.42
GTF2A2-202ENST00000396060 CAMSAP2Q08AD1 1489 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms