RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
GTF2A2-202ENST00000396060 CCDC180Q9P1Z9 1646 aa23.6■■□□□ 1.37
GTF2A2-202ENST00000396060 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
GTF2A2-202ENST00000396060 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
GTF2A2-202ENST00000396060 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
GTF2A2-202ENST00000396060 ABCC9O60706 1549 aa22.19■■□□□ 1.14
GTF2A2-202ENST00000396060 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
GTF2A2-202ENST00000396060 NACADO15069 1562 aa22.01■■□□□ 1.11
GTF2A2-202ENST00000396060 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
GTF2A2-202ENST00000396060 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
GTF2A2-202ENST00000396060 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
GTF2A2-202ENST00000396060 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
GTF2A2-202ENST00000396060 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
GTF2A2-202ENST00000396060 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
GTF2A2-202ENST00000396060 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
GTF2A2-202ENST00000396060 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
GTF2A2-202ENST00000396060 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
GTF2A2-202ENST00000396060 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
GTF2A2-202ENST00000396060 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
GTF2A2-202ENST00000396060 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
GTF2A2-202ENST00000396060 WIZO95785 1651 aa20.63■□□□□ 0.89
GTF2A2-202ENST00000396060 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
GTF2A2-202ENST00000396060 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
GTF2A2-202ENST00000396060 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
GTF2A2-202ENST00000396060 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
GTF2A2-202ENST00000396060 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
GTF2A2-202ENST00000396060 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
GTF2A2-202ENST00000396060 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
GTF2A2-202ENST00000396060 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
GTF2A2-202ENST00000396060 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
GTF2A2-202ENST00000396060 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
GTF2A2-202ENST00000396060 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
GTF2A2-202ENST00000396060 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
GTF2A2-202ENST00000396060 CFTRP13569 1480 aa19.85■□□□□ 0.77
GTF2A2-202ENST00000396060 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
GTF2A2-202ENST00000396060 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
GTF2A2-202ENST00000396060 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
GTF2A2-202ENST00000396060 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
GTF2A2-202ENST00000396060 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
GTF2A2-202ENST00000396060 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
GTF2A2-202ENST00000396060 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
GTF2A2-202ENST00000396060 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
GTF2A2-202ENST00000396060 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
GTF2A2-202ENST00000396060 EEA1Q15075 1411 aa19.51■□□□□ 0.71
GTF2A2-202ENST00000396060 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
GTF2A2-202ENST00000396060 CUX1P39880 1505 aa19.5■□□□□ 0.71
GTF2A2-202ENST00000396060 NESP48681 1621 aa19.49■□□□□ 0.71
GTF2A2-202ENST00000396060 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
GTF2A2-202ENST00000396060 SOGA1O94964 1423 aa19.43■□□□□ 0.7
GTF2A2-202ENST00000396060 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
GTF2A2-202ENST00000396060 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
GTF2A2-202ENST00000396060 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
GTF2A2-202ENST00000396060 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
GTF2A2-202ENST00000396060 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
GTF2A2-202ENST00000396060 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
GTF2A2-202ENST00000396060 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
GTF2A2-202ENST00000396060 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.68
GTF2A2-202ENST00000396060 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
GTF2A2-202ENST00000396060 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
GTF2A2-202ENST00000396060 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
GTF2A2-202ENST00000396060 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
GTF2A2-202ENST00000396060 KIF21BO75037 1637 aa19.2■□□□□ 0.66
GTF2A2-202ENST00000396060 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
GTF2A2-202ENST00000396060 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
GTF2A2-202ENST00000396060 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
GTF2A2-202ENST00000396060 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
GTF2A2-202ENST00000396060 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
GTF2A2-202ENST00000396060 CUX2O14529 1486 aa19.14■□□□□ 0.65
GTF2A2-202ENST00000396060 IGF1RP08069 1367 aa19.1■□□□□ 0.65
GTF2A2-202ENST00000396060 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
GTF2A2-202ENST00000396060 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
GTF2A2-202ENST00000396060 WDR62O43379 1518 aa19.09■□□□□ 0.65
GTF2A2-202ENST00000396060 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.65
GTF2A2-202ENST00000396060 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
GTF2A2-202ENST00000396060 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
GTF2A2-202ENST00000396060 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
GTF2A2-202ENST00000396060 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
GTF2A2-202ENST00000396060 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
GTF2A2-202ENST00000396060 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.63
GTF2A2-202ENST00000396060 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
GTF2A2-202ENST00000396060 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
GTF2A2-202ENST00000396060 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
GTF2A2-202ENST00000396060 CEP162Q5TB80 1403 aa18.97■□□□□ 0.63
GTF2A2-202ENST00000396060 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
GTF2A2-202ENST00000396060 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
GTF2A2-202ENST00000396060 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
GTF2A2-202ENST00000396060 CUL7Q14999 1698 aa18.91■□□□□ 0.62
GTF2A2-202ENST00000396060 CLIP1P30622 1438 aa18.85■□□□□ 0.61
GTF2A2-202ENST00000396060 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.62e-8■□□□□ 8.7
GTF2A2-202ENST00000396060 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
GTF2A2-202ENST00000396060 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
GTF2A2-202ENST00000396060 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
GTF2A2-202ENST00000396060 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.59
GTF2A2-202ENST00000396060 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
GTF2A2-202ENST00000396060 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
GTF2A2-202ENST00000396060 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
GTF2A2-202ENST00000396060 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
GTF2A2-202ENST00000396060 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
GTF2A2-202ENST00000396060 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
GTF2A2-202ENST00000396060 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms