RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 ARAP1Q96P48 1450 aa27.54■■■□□ 2
RTL8B-201ENST00000391440 TRIM26Q12899 539 aaPredicted RBP27.53■■■□□ 2
RTL8B-201ENST00000391440 TTBK1Q5TCY1 1321 aaPredicted RBP27.49■■□□□ 1.99
RTL8B-201ENST00000391440 P3H3Q8IVL6 736 aa27.48■■□□□ 1.99
RTL8B-201ENST00000391440 CTTNBP2Q8WZ74 1663 aa27.48■■□□□ 1.99
RTL8B-201ENST00000391440 FBLN2P98095 1184 aa27.43■■□□□ 1.98
RTL8B-201ENST00000391440 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
RTL8B-201ENST00000391440 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
RTL8B-201ENST00000391440 APLP2Q06481 763 aa27.41■■□□□ 1.98
RTL8B-201ENST00000391440 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
RTL8B-201ENST00000391440 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
RTL8B-201ENST00000391440 FHOD3Q2V2M9 1422 aa27.33■■□□□ 1.97
RTL8B-201ENST00000391440 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
RTL8B-201ENST00000391440 IQGAP2Q13576 1575 aa27.27■■□□□ 1.96
RTL8B-201ENST00000391440 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
RTL8B-201ENST00000391440 ATP1B4Q9UN42 357 aaPredicted RBP27.22■■□□□ 1.95
RTL8B-201ENST00000391440 SAMD9Q5K651 1589 aa27.21■■□□□ 1.95
RTL8B-201ENST00000391440 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
RTL8B-201ENST00000391440 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
RTL8B-201ENST00000391440 NUP160Q12769 1436 aa27.14■■□□□ 1.93
RTL8B-201ENST00000391440 FMN1Q68DA7 1419 aa27.13■■□□□ 1.93
RTL8B-201ENST00000391440 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
RTL8B-201ENST00000391440 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
RTL8B-201ENST00000391440 CASKIN1Q8WXD9 1431 aa27.08■■□□□ 1.93
RTL8B-201ENST00000391440 JPH4Q96JJ6 628 aa27.06■■□□□ 1.92
RTL8B-201ENST00000391440 FYCO1Q9BQS8 1478 aa27.04■■□□□ 1.92
RTL8B-201ENST00000391440 DISP1Q96F81 1524 aa27.04■■□□□ 1.92
RTL8B-201ENST00000391440 CHD1O14646 1710 aa27.03■■□□□ 1.92
RTL8B-201ENST00000391440 TIAM1Q13009 1591 aa27.01■■□□□ 1.92
RTL8B-201ENST00000391440 KIAA0556O60303 1618 aa26.99■■□□□ 1.91
RTL8B-201ENST00000391440 MAP3K1Q13233 1512 aa26.98■■□□□ 1.91
RTL8B-201ENST00000391440 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
RTL8B-201ENST00000391440 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
RTL8B-201ENST00000391440 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
RTL8B-201ENST00000391440 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
RTL8B-201ENST00000391440 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
RTL8B-201ENST00000391440 LRRIQ1Q96JM4 1722 aa26.83■■□□□ 1.89
RTL8B-201ENST00000391440 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
RTL8B-201ENST00000391440 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
RTL8B-201ENST00000391440 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
RTL8B-201ENST00000391440 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
RTL8B-201ENST00000391440 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
RTL8B-201ENST00000391440 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
RTL8B-201ENST00000391440 PHLDB1Q86UU1 1377 aa26.74■■□□□ 1.87
RTL8B-201ENST00000391440 CDK13Q14004 1512 aaKnown RBP26.74■■□□□ 1.87
RTL8B-201ENST00000391440 HRCP23327 699 aa26.73■■□□□ 1.87
RTL8B-201ENST00000391440 RAPGEF6Q8TEU7 1601 aa26.73■■□□□ 1.87
RTL8B-201ENST00000391440 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
RTL8B-201ENST00000391440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
RTL8B-201ENST00000391440 NUP153P49790 1475 aaKnown RBP26.71■■□□□ 1.87
RTL8B-201ENST00000391440 SHROOM2Q13796 1616 aa26.7■■□□□ 1.87
RTL8B-201ENST00000391440 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 CCNB3Q8WWL7 1395 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 PTPRGP23470 1445 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
RTL8B-201ENST00000391440 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
RTL8B-201ENST00000391440 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
RTL8B-201ENST00000391440 ITGAEP38570 1179 aa26.61■■□□□ 1.85
RTL8B-201ENST00000391440 NCOA2Q15596 1464 aa26.6■■□□□ 1.85
RTL8B-201ENST00000391440 FAM50AQ14320 339 aaKnown RBP26.6■■□□□ 1.85
RTL8B-201ENST00000391440 ABCA8O94911 1581 aa26.59■■□□□ 1.85
RTL8B-201ENST00000391440 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
RTL8B-201ENST00000391440 CDK11AQ9UQ88 783 aaPredicted RBP26.58■■□□□ 1.85
RTL8B-201ENST00000391440 SUPT6HQ7KZ85 1726 aaKnown RBP26.56■■□□□ 1.84
RTL8B-201ENST00000391440 CCER1Q8TC90 406 aaPredicted RBP26.51■■□□□ 1.83
RTL8B-201ENST00000391440 FGD6Q6ZV73 1430 aa26.5■■□□□ 1.83
RTL8B-201ENST00000391440 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
RTL8B-201ENST00000391440 ATP10BO94823 1461 aa26.49■■□□□ 1.83
RTL8B-201ENST00000391440 MYOM3Q5VTT5 1437 aa26.49■■□□□ 1.83
RTL8B-201ENST00000391440 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
RTL8B-201ENST00000391440 PLEKHD1A6NEE1 506 aa26.45■■□□□ 1.82
RTL8B-201ENST00000391440 TROQ12816 1431 aaPredicted RBP26.44■■□□□ 1.82
RTL8B-201ENST00000391440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
RTL8B-201ENST00000391440 ABCC2Q92887 1545 aa26.37■■□□□ 1.81
RTL8B-201ENST00000391440 ZEB1P37275 1124 aaPredicted RBP26.36■■□□□ 1.81
RTL8B-201ENST00000391440 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.81
RTL8B-201ENST00000391440 KIF14Q15058 1648 aa26.32■■□□□ 1.8
RTL8B-201ENST00000391440 MIA2Q96PC5 1412 aa26.3■■□□□ 1.8
RTL8B-201ENST00000391440 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
RTL8B-201ENST00000391440 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
RTL8B-201ENST00000391440 TCOF1Q13428 1488 aaKnown RBP26.26■■□□□ 1.79
RTL8B-201ENST00000391440 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
RTL8B-201ENST00000391440 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
RTL8B-201ENST00000391440 PTPRKQ15262 1439 aa26.25■■□□□ 1.79
RTL8B-201ENST00000391440 GPATCH8Q9UKJ3 1502 aaKnown RBP26.24■■□□□ 1.79
RTL8B-201ENST00000391440 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
RTL8B-201ENST00000391440 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
RTL8B-201ENST00000391440 RAB3GAP2Q9H2M9 1393 aa26.21■■□□□ 1.79
RTL8B-201ENST00000391440 KCNH8Q96L42 1107 aa26.21■■□□□ 1.79
RTL8B-201ENST00000391440 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.78
RTL8B-201ENST00000391440 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
RTL8B-201ENST00000391440 ZCCHC11Q5TAX3 1644 aaKnown RBP26.19■■□□□ 1.78
RTL8B-201ENST00000391440 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
RTL8B-201ENST00000391440 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
RTL8B-201ENST00000391440 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
RTL8B-201ENST00000391440 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
RTL8B-201ENST00000391440 RRP7BPQ9NSQ0 103 aa26.1■■□□□ 1.77
RTL8B-201ENST00000391440 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
RTL8B-201ENST00000391440 DAPK1P53355 1430 aa26.07■■□□□ 1.76
RTL8B-201ENST00000391440 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms